BAC Information

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BAC

Clone NameB6Ng01-292P17
Chromosome7 (Build37)
Map Location 30,726,026 - 30,726,802
singlet/doubletsinglet
Overlap geneZfp74
Upstream geneActn4, Eif3s12, Map4k1, Ryr1, Rasgrp4, 1110006G06Rik, Spred3, Ggn, Psmd8, A230107C01Rik, Kcnk6, Yif1b, Spint2, Ppp1r14a, Neud4, Sipa1l3, LOC100043791, 4932431P20Rik, 4930432E11Rik, 1700067C01Rik, Zfp84, LOC100043794, Zfp30, EG625349, 6330581L23Rik, BC027344, Zfp420, Zfp27
Downstream geneLOC625437, LOC100043796, Zfp568, Zfp14, LOC100043798, Zfp82, Zfp566, Zfp260, Zfp382, Zfp146, EG330503, Cox7a1, Capns1, Tbcb, Polr2i, Ovol3, Wdr62, EG668354, 1700020L13Rik, Clip3, Alkbh6, AI428936, 0610010E21Rik, Lrfn3, Tyrobp, Hcst, AY078069, Aplp1, Kirrel2, Nphs1, LOC100034728, Prodh2, Gm1082, Snx26, BC053749, Hspb6, 1810054G18Rik, Psenen, U2af1l4, Tmem149, Wbp7, Zbtb32, Upk1a, Cox6b1, Etv2, 3100004P22Rik, 2310022K01Rik, 4930479M11Rik, 2200002J24Rik, EG233075, Atp4a, Tmem147, Gapdhs, Sbsn, Dmkn, Krtdap, Ffar2, Ffar3, Ffar1, Cd22, Mag, Hamp2, Usf2-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-292P17.g
ACCGA089478
length1,088
definitionB6Ng01-292P17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgacgacctcacaggccacatgcttccaaatggccttccttggt
aacatggaccatggacctcaataaggcctcccagctgcactttgaccaca
tagcttcacatgaacttccatgggatcatgaaccacgacatcggtatggt
gtcaagcaaccacacaaaccctggacattcaaatggacttcaacagtgac
tcttgatattaatactaacatggcccctggctgctgtaggacccaggaca
tccacatgaaccttgggcttcaacaaagcctggggcagtggaccatagat
accactgtggcctctaggggaagcagggaccatagagatcttccgaggag
gcccaattcagaaaacatttctcatctcaaacatcctgttgttcagagcc
cgggcgcagcatgtttgaggctgagtctgcgcaagcttcaggctgccgcc
caacaccattagccacgttccctgtccacagcagccatctctcacatctg
tcatcagggtctctacctctgcctctctccactgctcaatcactgcacca
ctcctccatctccccctctctacttcatataaataacatcggaaactgca
gtgcgtcacagtttgttttttgcccaaacagatttacatgcgaatactca
ttgtaacgggtcatctgtcatcaaaaatattgggcccttgcccagacttg
tctctgataaccagagtcagggtgataatgtggctaggcaggatgcccca
ggggcagtttctgtgcacgctcctagctgctgcatacctccctgccctca
gtgtctgccagttgggggttcaccaggcgtgacctgtgagcagcacccct
tccctacgctttcactctcccagcagtgcaagcagcacaggctgcagcca
cagcggctccatgctggaagggtttaggactagccctatacagcaataaa
caatgtttctgagggagctccaggatgctgcctaccaccctgttccttgg
ttcctgcagcccacggcttcacgggcacaactgtaagtttgtaggatgtt
agcccagccagcggcgttactgccttcatcgtactggc
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_30726026_30726802
seq2: B6Ng01-292P17.g_373_1151

seq1  GCCTCTAGGGGAAGCAGGGACCATAGAGATCTTCCGAGGAGGCCCAATTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTAGGGGAAGCAGGGACCATAGAGATCTTCCGAGGAGGCCCAATTC  50

seq1  AGAAAACATTTCTCATCTCGAACATCCTGTTGTTCAGAGCCCGGGCGCAG  100
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AGAAAACATTTCTCATCTCAAACATCCTGTTGTTCAGAGCCCGGGCGCAG  100

seq1  CATGTTTGAGGCTGAGTCTGCGCAAGCTTCAGGCTGCCGCCCAACACCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTTGAGGCTGAGTCTGCGCAAGCTTCAGGCTGCCGCCCAACACCAT  150

seq1  TAGCCACGTTCCCTGTCCACAGCAGCCATCTCTCACATCTGTCATCAGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCACGTTCCCTGTCCACAGCAGCCATCTCTCACATCTGTCATCAGGG  200

seq1  TCTCTACCTCTGCCTCTCTCCACTGCTCAATCACTGCACCACTCCTCCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTACCTCTGCCTCTCTCCACTGCTCAATCACTGCACCACTCCTCCAT  250

seq1  CTCCCCCTCTCTACTTCATATAAATAACATCGGAAACTGCAGTGCGTCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCCTCTCTACTTCATATAAATAACATCGGAAACTGCAGTGCGTCAC  300

seq1  AGTTTGTTTTTTGCCCAAACAGATTTACATGCGAATACTCATTGTAACGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGTTTTTTGCCCAAACAGATTTACATGCGAATACTCATTGTAACGG  350

seq1  GTCATCTGTCATCAAAAATATTGGGCCCTTGCCCAGACTTGTCTCTGATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATCTGTCATCAAAAATATTGGGCCCTTGCCCAGACTTGTCTCTGATA  400

seq1  ACCAGAGTCAGGGTGATAATGTGGCTAGGCAGGATGCCCCAGGGGCAGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGAGTCAGGGTGATAATGTGGCTAGGCAGGATGCCCCAGGGGCAGTT  450

seq1  TCTGTGCACGCTCCTAGCTGCTGCATACCTCCCTGCCCTCAGTGTCTGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGCACGCTCCTAGCTGCTGCATACCTCCCTGCCCTCAGTGTCTGCC  500

seq1  AGTTGGGGGTTCACCAGGCGTGACCTGTGAGCAGCACCCCTTCCCTACGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGGGGGTTCACCAGGCGTGACCTGTGAGCAGCACCCCTTCCCTACGC  550

seq1  TTTCACTCTCCCAGCAGTGCAAGCAGCACAGGCTGCAGCCACAGCGGCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACTCTCCCAGCAGTGCAAGCAGCACAGGCTGCAGCCACAGCGGCTC  600

seq1  CATGCTGG-AGGGTTTAGGACTAGCCCTATACAGCAATAA--CATGTTTC  647
      |||||||| |||||||||||||||||||||||||||||||   |||||||
seq2  CATGCTGGAAGGGTTTAGGACTAGCCCTATACAGCAATAAACAATGTTTC  650

seq1  TGAGGGAGCTCCAGGATGCTGCCTACCACCCTG-TCCTTGTTTCCTGCAG  696
      ||||||||||||||||||||||||||||||||| |||||| |||||||||
seq2  TGAGGGAGCTCCAGGATGCTGCCTACCACCCTGTTCCTTGGTTCCTGCAG  700

seq1  CCCCACGGCTCACCGGGCACAACTGTTAAGTTTGTAGGATG-TAGGCCAG  745
       |||||||||   |||||||||||| ||||||||||||||| ||| ||||
seq2  -CCCACGGCTTCACGGGCACAACTG-TAAGTTTGTAGGATGTTAGCCCAG  748

seq1  CCAGGCCGCCGTACTGCC-TCATCGGTACTGGC  777
      ||| || ||  ||||||| ||||| ||||||||
seq2  CCA-GCGGCGTTACTGCCTTCATC-GTACTGGC  779