BAC Information

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BAC

Clone NameB6Ng01-293O17
Chromosome7 (Build37)
Map Location 149,981,266 - 149,982,396
singlet/doubletsinglet
Overlap genenone
Upstream geneMuc5ac, Muc5b, Tollip, EG623757, Brsk2, 2700078K21Rik, Dusp8, LOC100039728, EG668763, LOC100043616, EG665295, LOC100043617, Krtap5-2, LOC100039757, LOC100039767, EG665305, Krtap5-5, EG640223, LOC672428, LOC100039800, LOC100043627, LOC100043629, ENSMUSG00000038442, Krtap5-1, Krtap5-4, LOC270015, 6330512M04Rik, Ctsd, Syt8, Tnni2, Lsp1, ENSMUSG00000043795, Tnnt3, Mrpl23, Nctc1, H19, Igf2, Igf2as, Ins2, EG640264
Downstream geneEG624121, Th, Ascl2, Tspan32, R74862, Cd81, Tssc4, Trpm5, Kcnq1, Cdkn1c, Slc22a18, Phlda2, Nap1l4, Cars, Tnfrsf26, Tnfrsf22, Tnfrsf23, Osbpl5, Mrgprg, Mrgpre, Nadsyn1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-293O17.bB6Ng01-293O17.g
ACCGA090182GA090183
length1,1421,154
definitionB6Ng01-293O17.b B6Ng01-293O17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccacaggaaggccaacagagttaactagcctggatccttggggct
ttcaaagtctgaaaaacaaaccagagctgaacctaagcctccccatcata
tgtagcagatgtgcagcttgaccaacatgtgggtcctgaacaactggaac
aggagctatactaaaaactgttgcctggaaaggattgaaggaactgaagg
ggatggcaacaccatagaaagactaacagtgttaactcacctggacatct
ggggtgtcccagagatgaagccacatacaaccaaagacatacattggtat
aaggctggctgccagcatatttgtaacagaagactgccttgtatggctta
agtgggagaagatgtgcctagtcctgcagagacttgatgccccaaggagg
ggagatgcccagaaggagcaacctctcagaggcgaaggggaggggaattg
gggaagaactctgcatgtaggaaatggcagaagggcaacatttgggatgt
aaataaagtaattaatgtttccttttcgacatgtctgcaataagaaaagc
aagaatttctaatgaaaaaaaaaaaaactagatgatgcactcaggacctc
attgcaacctgggaaactcctcctcagccagagactttattgctaatcat
ttctataaaaacatggaaacactgaaagatttgtttagcagaatgcattt
gtaactccccaaaattatactacttatatgtccgcattaaccatgatgga
aggcttcctttgtatgctatcatggttagtttccacttgcaggtgaccag
atacccactatataggaatacagttagagaggcaattcactgcatagcct
tcatgtttgcagcctctataaataaagacagccattatcaataagatcta
tgcaaaactctgatcatacatgatggtgaatctataaaagtcttgctccc
tggagactggtatggagctaaatctcccataccactctatataaaaaaac
aaaaaacaaaaacacaaaaaacattagaagtatattgtactagaacaatt
ggtaagagcatttttaaaaacaagcctgcttcaacttcatgcttatataa
catgaaaatcctttcaaatagtgaattagcaagtgcaaaatt
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaata
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacttcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctta
gaaaattggacatagtactaccggaggatccagtaatacctctcccgggc
atatatccagaagatgttccaaacggtaagtaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaatagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactattcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatattagtctaaaact
taggatacccaaaatgtaagatacaatttgctaaacgcatgaaactgaag
aagaatgaagaccaaagtgtggacactgtgccccttcttagaattgggaa
caaaatacccatggaaggagttacagagacaaagtttggagctgtcaaga
aaggatggaccatctagagactgccatatccagggatccaccccataaac
agcttccaaacgctgacatcattgcatacactagcaagattttgctgaaa
ggacccagatatagctgtctcttgtgagactatgccggggccctagcaaa
cacataagtggatgctcacagtcagctattggatgggatcacaggctccc
aatggaggagctagagaaagtacccaaggagctaaagggatctgcagcct
ataggtgtacacatatgactaacagtaccccagagctcttgactctagct
gcatatgtatcaaagattgctagttcgtcattcactggatagagagccat
gaacaccaaacctaatgcctagtacagggtatgccacgtcaaaaatggca
aatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_149981266_149982396
seq2: B6Ng01-293O17.b_67_1192 (reverse)

seq1  ATTTTTGCACTTGCTAAATCACTA-TTGGAGGGTTTTTCATGTAATAATA  49
      | ||||||||||||||| |||||| ||| | || ||||||||| || |||
seq2  AATTTTGCACTTGCTAATTCACTATTTGAAAGGATTTTCATGTTAT-ATA  49

seq1  AGCATGAAGTTGAAGCAGGCTTTGTTTTAAAAATGCTCTTACCAATTG-T  98
      ||||||||||||||||||||||  |||||||||||||||||||||||| |
seq2  AGCATGAAGTTGAAGCAGGCTTGTTTTTAAAAATGCTCTTACCAATTGTT  99

seq1  CTAGTACAATATACTTCTAATGTTTTTTTGTTGTTTTTTGTTTTTTGTTT  148
      |||||||||||||||||||||| ||||||||   ||||||||||||||||
seq2  CTAGTACAATATACTTCTAATG-TTTTTTGT--GTTTTTGTTTTTTGTTT  146

seq1  TTTTTTATTATAGAGTGGTATGGGAGATTTAGCTCCATACCAGTCTCCAG  198
      ||||    ||||||||||||||||||||||||||||||||||||||||||
seq2  TTTT---ATATAGAGTGGTATGGGAGATTTAGCTCCATACCAGTCTCCAG  193

seq1  GGAGCAAGACTTTTATAGATTCACCATCATGTATGATCAGAGTTTTGCAT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCAAGACTTTTATAGATTCACCATCATGTATGATCAGAGTTTTGCAT  243

seq1  AGATCTTATTGATAATGGCTGTCTTTATTTATAGAGGCTGCAAACATGAA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTTATTGATAATGGCTGTCTTTATTTATAGAGGCTGCAAACATGAA  293

seq1  GGCTATGCAGTGAATTGCCTCTCTAACTGTATTCCTATATAGTGGGTATC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTATGCAGTGAATTGCCTCTCTAACTGTATTCCTATATAGTGGGTATC  343

seq1  TGGTCACCTGCAAGTGGAAACTAACCATGATAGCATACAAAGGAAGCCTT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCACCTGCAAGTGGAAACTAACCATGATAGCATACAAAGGAAGCCTT  393

seq1  CCATCATGGTTAATGCGGACATATAAGTAGTATAATTTTGGGGAGTTACA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCATGGTTAATGCGGACATATAAGTAGTATAATTTTGGGGAGTTACA  443

seq1  AATGCATTCTGCTAAACAAATCTTTCAGTGTTTCCATGTTTTTATAGAAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCATTCTGCTAAACAAATCTTTCAGTGTTTCCATGTTTTTATAGAAA  493

seq1  TGATTAGCAATAAAGTCTCTGGCTGAGGAGGAGTTTCCCAGGTTGCAATG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTAGCAATAAAGTCTCTGGCTGAGGAGGAGTTTCCCAGGTTGCAATG  543

seq1  AGGTCCTGAGTGCATCATCTAGTTTTTTTTTTTTTCATTAGAAATTCTTG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCCTGAGTGCATCATCTAGTTTTTTTTTTTTTCATTAGAAATTCTTG  593

seq1  CTTTTCTTATTGCAGACATGTCGAAAAGGAAACATTAATTACTTTATTTA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCTTATTGCAGACATGTCGAAAAGGAAACATTAATTACTTTATTTA  643

seq1  CATCCCAAATGTTGCCCTTCTGCCATTTCCTACATGCAGAGTTCTTCCCC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCCAAATGTTGCCCTTCTGCCATTTCCTACATGCAGAGTTCTTCCCC  693

seq1  AATTCCCCTCCCCTTCGCCTCTGAGAGGTTGCTCCTTCTGGGCATCTCCC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCCCTCCCCTTCGCCTCTGAGAGGTTGCTCCTTCTGGGCATCTCCC  743

seq1  CTCCTTGGGGCATCAAGTCTCTGCAGGACTAGGCACATCTTCTCCCACTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTGGGGCATCAAGTCTCTGCAGGACTAGGCACATCTTCTCCCACTT  793

seq1  AAGCCATACAAGGCAGTCTTCTGTTACAAATATGCTGGCAGCCAGCCTTA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCATACAAGGCAGTCTTCTGTTACAAATATGCTGGCAGCCAGCCTTA  843

seq1  TACCAATGTATGTCTTTGGTTGTATGTGGCTTCATCTCTGGGACACCCCA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAATGTATGTCTTTGGTTGTATGTGGCTTCATCTCTGGGACACCCCA  893

seq1  GATGTCCAGGTGAGTTAACACTGTTAGTCTTTCTATGGTGTTGCCATCCC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTCCAGGTGAGTTAACACTGTTAGTCTTTCTATGGTGTTGCCATCCC  943

seq1  CTTCAGTTCCTTCAATCCTTTCCAGGCAACAGTTTTTAGTATAGCTCCTG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGTTCCTTCAATCCTTTCCAGGCAACAGTTTTTAGTATAGCTCCTG  993

seq1  TTCCAGTTGTTCAGGACCCACATGTTGGTCAAGCTGCACATCTGCTACAT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGTTGTTCAGGACCCACATGTTGGTCAAGCTGCACATCTGCTACAT  1043

seq1  ATGATGGGGAGGCTTAGGTTCAGCTCTGGTTTGTTTTTCAGACTTTGAAA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGGGGAGGCTTAGGTTCAGCTCTGGTTTGTTTTTCAGACTTTGAAA  1093

seq1  GCCCCAAGGATCCAGGCTAGTTAACTCTGTTGG  1131
      |||||||||||||||||||||||||||||||||
seq2  GCCCCAAGGATCCAGGCTAGTTAACTCTGTTGG  1126