BAC Information

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BAC

Clone NameB6Ng01-294O05
Chromosome7 (Build37)3 (Build37)
Map Location 139,153,442 - 139,154,41730,710,340 - 30,710,845
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneDmbt1, 4933402N03Rik, 5430419D17Rik, LOC546006, LOC100043173, Cuzd1, 1700007K09Rik, 1700063I17Rik, 2310057M21Rik, Pstk, Ikzf5, Acadsb, Hmx3, Hmx2, Bub3, LOC677073, LOC100043679
Downstream geneGpr26, Cpxm2, 4631426J05Rik, LOC100043682, LOC100043683, Oat, Nkx1-2, 2310007H09Rik, A930008G19Rik, 2010208K18Rik, C430003P19Rik, Zranb1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-294O05.bB6Ng01-294O05.g
ACCGA090897GA090898
length972640
definitionB6Ng01-294O05.b B6Ng01-294O05.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(139,153,442 - 139,154,417)(30,710,340 - 30,710,845)
sequence
gaattccatcagacagcacagccttgcttcttttggaagattaccaagca
cagctattggacagtgagatttttctcccctctttctgagtttatcacct
tccatagccaggttgtgtgatctggggccatcacaaagacttgaaaatag
caaaggttcggggggcccattagtgatgcagtgcttctctttgataatga
gcaaatgagcctggcgtgcaaatgcatgcttatgattccaacattaaaga
ggcagaagcaggagggtcagaagttcaaggtcatccatccttagctatat
agcaagtttgaggccagccttggctaattaagatattgtttcaaaagcca
cattttgtttttgttcaactgagccacagactctttgacctattgggaaa
acagaatgtgcagtttacccagcatgagggttgaccagagtgtaaacaaa
cagccttcttggagagagcccactagtctaacatgctagttgtagtagag
agagtaccaaacatcgatctagtccttggccagtctttcaggaggtagtc
tgccactctgtgccatatgtctttctgcaaagagttaatggactccctgg
ggtctcaatgccctaatcttggtgatgagaccatctcatgctggcctctg
gtataccgcagtgctactgtgaccactttaaatgccagttgagcaaatgc
tttgaaaatgaaaactatctgatagcccacgtcaggagttgagaggctgg
ctggatgctccaagctatgcaagccatctattcaataggccttatatttt
tgtgactgccatggggctggtacctccatctgtgtctcccaccatcctga
atgtccacttcctgctacagagtcacagttcttcagatctctacgctcag
atccataagcatttccacagatacttcgttgctatggagtgttcagatcg
tgtacctctcatcttagcttat
gaattcactttgctggtggttgaggctcccagcctcttcagggagttaaa
ctagtctatgacgtggtggagctttcattagaagtttggccacagagcgg
ggtgagtaggataggtggaatggttgggaatgcttcacaggtgctatagg
aaaatacagtgcaattctctgcaaggaagctttttttaaaaaaagattta
ttatatgtaagtacactgtagtctggagaccatgggcatttgacttgagc
cttcagaactgactggcagattgcccattgtaccaggaaagagagataga
tctattagggaagaaagcaagctgaacaagcttgccatcttgaaaaggcc
aggctgtgcatgtgcacgtgcgcgcacacacacacacacacacacacaca
cacacacacaagaaacactgtatctccagacttaaaattggaaatttccc
ttttattaaacataggtttttaagctgaatatggtggtgtacacctttaa
tcctagcacttgagagacagatctctgtgagtttgaggccagcccctggt
ctgtatagtcagtcagttcaaggctagccagggctgttatataaaagaaa
ctccatctaaaaagggtgggggggatgttagagggttggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_139153442_139154417
seq2: B6Ng01-294O05.b_45_1016

seq1  GAATTCCATCAGACAGCACAGCCTTGCTTCTTTTGGAAGATTACCAAGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATCAGACAGCACAGCCTTGCTTCTTTTGGAAGATTACCAAGCA  50

seq1  CAGCTATTGGACAGTGAGATTTTTCTCCCCTCTTTCTGAGTTTATCACCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTATTGGACAGTGAGATTTTTCTCCCCTCTTTCTGAGTTTATCACCT  100

seq1  TCCATAGCCAGGTTGTGTGATCTGGGGCCATCACAAAGACTTGAAAATAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATAGCCAGGTTGTGTGATCTGGGGCCATCACAAAGACTTGAAAATAG  150

seq1  CAAAGGTTCGGGGGGCCCATTAGTGATGCAGTGCTTCTCTTTGATAATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGTTCGGGGGGCCCATTAGTGATGCAGTGCTTCTCTTTGATAATGA  200

seq1  GCAAATGAGCCTGGCGTGCAAATGCATGCTTATGATTCCAACATTAAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GCAAATGAGCCTGGCGTGCAAATGCATGCTTATGATTCCAACATTAAAGA  250

seq1  GGCAGAAGCAGGAGGGTCAGAAGTTCAAGGTCATCCATCCTTAGCTATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAAGCAGGAGGGTCAGAAGTTCAAGGTCATCCATCCTTAGCTATAT  300

seq1  AGCAAGTTTGAGGCCAGCCTTGGCTAATTAAGATATTGTTTCAAAAGCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGTTTGAGGCCAGCCTTGGCTAATTAAGATATTGTTTCAAAAGCCA  350

seq1  CATTTTGTTTTTGTTCAACTGAGCCACAGACTCTTTGACCTATTGGGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTGTTTTTGTTCAACTGAGCCACAGACTCTTTGACCTATTGGGAAA  400

seq1  ACAGAATGTGCAGTTTACCCAGCATGAGGGTTGACCAGAGTGTAAACAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAATGTGCAGTTTACCCAGCATGAGGGTTGACCAGAGTGTAAACAAA  450

seq1  CAGCCTTCTTGGAGAGAGCCCACTAGTCTAACATGCTAGTTGTAGTAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTTCTTGGAGAGAGCCCACTAGTCTAACATGCTAGTTGTAGTAGAG  500

seq1  AGAGTACCAAACATCGATCTAGTCCTTGGCCAGTCTTTCAGGAGGTAGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTACCAAACATCGATCTAGTCCTTGGCCAGTCTTTCAGGAGGTAGTC  550

seq1  TGCCACTCTGTGCCATATGTCTTTCTGCAAAGAGTTAATGGACTCCCTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCACTCTGTGCCATATGTCTTTCTGCAAAGAGTTAATGGACTCCCTGG  600

seq1  GGTCTCAATGCCCTAATCTTGGTGATGAGACCATCTCTTGCTGGCCTCTG  650
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GGTCTCAATGCCCTAATCTTGGTGATGAGACCATCTCATGCTGGCCTCTG  650

seq1  GTATACCGCAGTGCTACTGTGACCACTTTAAATGCCAGTTGAGCAAATGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATACCGCAGTGCTACTGTGACCACTTTAAATGCCAGTTGAGCAAATGC  700

seq1  TTTGAAAATGAAAACTAGCTGTTAGGCCCAGGTCAGGAGGTTGAGAGGCT  750
      ||||||||||||||||| ||| || ||||| ||||||| |||||||||||
seq2  TTTGAAAATGAAAACTATCTGATA-GCCCACGTCAGGA-GTTGAGAGGCT  748

seq1  GGCTGGATGCTCCAAGCTATGCAAGCCATCAATTCAATAGGCCTTATATT  800
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GGCTGGATGCTCCAAGCTATGCAAGCCATCTATTCAATAGGCCTTATATT  798

seq1  TTTGTGACTGCCATGGGGCTGGTACCTCCATCTGTGTCTCCCACCTTCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TTTGTGACTGCCATGGGGCTGGTACCTCCATCTGTGTCTCCCACCATCCT  848

seq1  GAAGGTCCACTTCCTGCTACAGAGTCACAGTTCTTCAGATCTCTAGGCTC  900
      ||| ||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GAATGTCCACTTCCTGCTACAGAGTCACAGTTCTTCAGATCTCTACGCTC  898

seq1  AGATCCATAGGCATTTCCCCAGATACTTCGTTTCCTATGGAGTGTTCAGA  950
      ||||||||| |||||||| ||||||||||| || ||||||||||||||| 
seq2  AGATCCATAAGCATTTCCACAGATACTTCG-TTGCTATGGAGTGTTCAG-  946

seq1  ATCGTGTCCCTCTCTCCTTAGCTTAT  976
      ||||||| ||||||  ||||||||||
seq2  ATCGTGTACCTCTCATCTTAGCTTAT  972

seq1: chr3_30710340_30710845
seq2: B6Ng01-294O05.g_198_705

seq1  CTTCACAGGTGCTATAGGAAAATACAGTGCAATTCTCTGCAAGGAAGCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACAGGTGCTATAGGAAAATACAGTGCAATTCTCTGCAAGGAAGCTT  50

seq1  TTTTTAAAAAAAGATTTATTATATGTAAGTACACTGTAGTCTGGAGACCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAAAAAAAGATTTATTATATGTAAGTACACTGTAGTCTGGAGACCA  100

seq1  TGGGCATTTGACTTGAGCCTTCAGAACTGACTGGCAGATTGCCCATTGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCATTTGACTTGAGCCTTCAGAACTGACTGGCAGATTGCCCATTGTA  150

seq1  CCAGGAAAGAGAGATAGATCTATTAGGGAAGAAAGCAAGCTGAACAAGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGAAAGAGAGATAGATCTATTAGGGAAGAAAGCAAGCTGAACAAGCT  200

seq1  TGCCATCTTGAAAAGGCCAGGCTGTGCATGTGCACGTGCGCGCACACACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATCTTGAAAAGGCCAGGCTGTGCATGTGCACGTGCGCGCACACACA  250

seq1  CACACACACACACACACACACACACACAAGAAACACTGTATCTCCAGACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACAAGAAACACTGTATCTCCAGACT  300

seq1  TAAAATTGGAAATTTCCCTTTTATTAAACATAGGTTTTTAAGCTGAATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTGGAAATTTCCCTTTTATTAAACATAGGTTTTTAAGCTGAATAT  350

seq1  GGTGGTGTACACCTTTAATCCTAGCACTTGAGAGACAGATCTCTGTGAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGTGTACACCTTTAATCCTAGCACTTGAGAGACAGATCTCTGTGAGT  400

seq1  TTGAGGCCAGCCCCTGGTCTGTATAGTCAGTCAGTTCAAGGCTAGCCAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGCCAGCCCCTGGTCTGTATAGTCAGTCAGTTCAAGGCTAGCCAGG  450

seq1  GCTGTTATAT-AAAGAAACTCCATCTAAAAAGGGT-GGGGGGATGTTAGA  498
      |||||||||| |||||||||||||||||||||||| ||||||||||||||
seq2  GCTGTTATATAAAAGAAACTCCATCTAAAAAGGGTGGGGGGGATGTTAGA  500

seq1  GGGTTGGG  506
      ||||||||
seq2  GGGTTGGG  508