BAC Information

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BAC

Clone NameB6Ng01-294P14
Chromosome7 (Build37)
Map Location 60,946,567 - 60,992,206
singlet/doubletdoublet
Overlap genenone
Upstream geneEG620782, LOC100040692, Gm1865, LOC100040718
Downstream geneLOC668789, Mrps33p, LOC622146
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-294P14.bB6Ng01-294P14.g
ACCGA090963GA090964
length1,2001,148
definitionB6Ng01-294P14.b B6Ng01-294P14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(60,946,567 - 60,947,754)(60,991,043 - 60,992,206)
sequence
gaattcactaaagtaataaattccgtcattctaaaggtttaaccttgctg
agtgtctctatataaatagctttaaatgttcagcatagaaaatgctggat
ctgcattgtaacacttctttctaaattcaaagccacaatgaaattgtttg
aatgcaaatggcccacataggctcttaaggagtggccctatcagaagtat
agccttttgggagtaggtgtggccttgttggaggaattgtactactagag
attggggtttggagttttactaggtcaaagcagacctagtaggactctac
ctgctgtctacctatccagaggtagaactctcatctacttctccactgcc
aagtcggcctgcatgctaccatgtttcttgccatgatgatgatagagtga
aattcccaacagttagccagtcctacttaaatgtattctttcataagagt
tgtcagggatgtggtgcctcatcacagaaataaatccctaactaagacaa
ctatggtcttttgtttcagttgcctatctagtgcaaaccatttttctaaa
taagaaagacatgagttccataccttgttaattagtagtgttaaaccaac
ccctgtaacattcattaagagtgattaagttctacctttgatctttaacc
ttttatatagaattgcacaatttctcacaaacacatacaatgcaaacaga
cacacagacacagaaacagaaaaagagacagagaggtacagatggagaga
catagagagacagagagagacagaaagacatagacacagagaatctttct
cataacattttctggcaccatagaacatgcgtctttgaatgatattgtat
gcattttatatgtctctaaagaacatacataagtaattagatctatactt
tacaggaatgcaataggaataataaacttatcattaagccaggaaggaga
aaagaggtgaaagttaaggtgttgtggctttcatggtggaattagatcaa
gtttctctgtcctgaacaaaaggcatctaaactctttacatttccaacct
ctttacacatttatttgtgtttgccattcactggaagttcttctattcct
agctccaataaatataatcttatactatcagaaacctaatttttaaactg
tactgatattcatttatactatttgcatggatattatcttaatatattag


gaattcatcttttttcagtatgtgtttctgctggaaccatgtccacattt
taagagggaagatgaacggtgaatgccctggcttctccttgttctgatta
attttgtgacagtgataatagcaagtctgggactcacccaggtgcagtta
gctgctgtgacctctccatctcatcaatactgagttcaggttatttttca
tcttgacacaaaacaatgtcttttcagatgccaattgaaaattcctacag
caagacttggtagaatgttttaagaagcaaatcaggacaaacaaaacaaa
tacctgtttgatttgaattcagataattggaaagggttgcttttattcct
caaagagaaagttttgataaaatatattgaaatatgaaagtaggatgtct
gtcttgaaatatttcactcataaaatgtacagtttgaggataataaaaaa
tttcaatcacatcatttgttttatttcctttggctattattgggcaaagg
gatgagttactgcaccaactacatccatgtcttcatgctatcaagtagtc
ttatagatgaagatgaccagttacagaaagaatatacatctttgtaatta
cacaacaggaaggtaatactaatgaagatcaatggagaaaagggagaaat
gtttattcaggaaatatcttgaaatttgcatgttcatagaatattttatt
tcagaattttaaaaaaagaatgtgtatttatttgagttcctaatcctgtt
tgattttctgttcatataatgtttcatcactcagtgtatagctattttgt
catcatatataaatttaaaaaaagccatgtatatgttttcaatttgatga
aatgtttaatattaggtggaatttgggaaataggagactaagaaagtaca
cacacacacacatgggaaatacacacatgcatagcaagaatactgtactg
atcttatactttcagctgtggctgaagtaataattgacatttccaaataa
taaataaataaataataaataataaataaattatgtctctatatctgcct
atctaggcaatttctcactaatccatcactctcaagttctaatttagcaa
ctcatttctaaattaatctgactcatagtctaaccctacatagtgtgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_60946567_60947754
seq2: B6Ng01-294P14.b_51_1250

seq1  GAATTCACTAAAGTAATAAATTCCGTCATTCTAAAGGTTTAACCTTGCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTAAAGTAATAAATTCCGTCATTCTAAAGGTTTAACCTTGCTG  50

seq1  AGTGTCTCTATATAAATAGCTTTAAATGTTCAGCATAGAAAATGCTGGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTCTCTATATAAATAGCTTTAAATGTTCAGCATAGAAAATGCTGGAT  100

seq1  CTGCATTGTAACACTTCTTTCTAAATTCAAAGCCACAATGAAATTGTTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATTGTAACACTTCTTTCTAAATTCAAAGCCACAATGAAATTGTTTG  150

seq1  AATGCAAATGGCCCACATAGGCTCTTAAGGAGTGGCCCTATCAGAAGTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCAAATGGCCCACATAGGCTCTTAAGGAGTGGCCCTATCAGAAGTAT  200

seq1  AGCCTTTTGGGAGTAGGTGTGGCCTTGTTGGAGGAATTGTACTACTAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTTTGGGAGTAGGTGTGGCCTTGTTGGAGGAATTGTACTACTAGAG  250

seq1  ATTGGGGTTTGGAGTTTTACTAGGTCAAAGCAGACCTAGTAGGACTCTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGGGTTTGGAGTTTTACTAGGTCAAAGCAGACCTAGTAGGACTCTAC  300

seq1  CTGCTGTCTACCTATCCAGAGGTAGAACTCTCATCTACTTCTCCACTGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGTCTACCTATCCAGAGGTAGAACTCTCATCTACTTCTCCACTGCC  350

seq1  AAGTCGGCCTGCATGCTACCATGTTTCTTGCCATGATGATGATAGAGTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCGGCCTGCATGCTACCATGTTTCTTGCCATGATGATGATAGAGTGA  400

seq1  AATTCCCAACAGTTAGCCAGTCCTACTTAAATGTATTCTTTCATAAGAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCCAACAGTTAGCCAGTCCTACTTAAATGTATTCTTTCATAAGAGT  450

seq1  TGTCAGGGATGTGGTGCCTCATCACAGAAATAAATCCCTAACTAAGACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGGGATGTGGTGCCTCATCACAGAAATAAATCCCTAACTAAGACAA  500

seq1  CTATGGTCTTTTGTTTCAGTTGCCTATCTAGTGCAAACCATTTTTCTAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGGTCTTTTGTTTCAGTTGCCTATCTAGTGCAAACCATTTTTCTAAA  550

seq1  TAAGAAAGACATGAGTTCCATACCTTGTTAATTAGTAGTGTTAAACCAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAAGACATGAGTTCCATACCTTGTTAATTAGTAGTGTTAAACCAAC  600

seq1  CCCTGTAACATTCATTAAGAGTGATTAAGTTCTACCTTTGATCTTTAACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTAACATTCATTAAGAGTGATTAAGTTCTACCTTTGATCTTTAACC  650

seq1  TTTTATATAGAATTGCACAATTTCTCACAAACACATACAATGCAAACAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATATAGAATTGCACAATTTCTCACAAACACATACAATGCAAACAGA  700

seq1  CACACAGACACAGAAACAGAAAAAGAGACAGAGAGGTACAGATGGAGAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAGACACAGAAACAGAAAAAGAGACAGAGAGGTACAGATGGAGAGA  750

seq1  CATAGAGAGACAGAGAGAGACAGAAAGACATAGACACAGAGAATCTTTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGAGAGACAGAGAGAGACAGAAAGACATAGACACAGAGAATCTTTCT  800

seq1  CATAACATTTTCTGGCACCATAGAACATGCGTCTTTGAATGATATTGTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAACATTTTCTGGCACCATAGAACATGCGTCTTTGAATGATATTGTAT  850

seq1  GCATTTTATATGTCTCTAAAGAACATACATAAGTAATTAGATCTATACTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTTATATGTCTCTAAAGAACATACATAAGTAATTAGATCTATACTT  900

seq1  TACAGGAATGCAATAGGAATAATAAACTTATCA-TAAGCCAGGAA-GAG-  947
      ||||||||||||||||||||||||||||||||| ||||||||||| ||| 
seq2  TACAGGAATGCAATAGGAATAATAAACTTATCATTAAGCCAGGAAGGAGA  950

seq1  AAAGAGGTGAAAGTTAA-GTG-TGTGGCTTTCAT-GTG--AATAGATCAA  992
      ||||||||||||||||| ||| |||||||||||| |||  | ||||||||
seq2  AAAGAGGTGAAAGTTAAGGTGTTGTGGCTTTCATGGTGGAATTAGATCAA  1000

seq1  GTTTCTCTGTCCTG-ACAAAA-GCATCTAAACTCTTTACATTTTCCAACC  1040
      |||||||||||||| |||||| |||||||||||||||||| |||||||||
seq2  GTTTCTCTGTCCTGAACAAAAGGCATCTAAACTCTTTACA-TTTCCAACC  1049

seq1  TCTTTCCACATTTATTTGTGTTTGCCCATTCACT-GAAGTCCTTCTATTC  1089
      ||||| |||||||||||||||||| ||||||||| ||||| |||||||||
seq2  TCTTTACACATTTATTTGTGTTTG-CCATTCACTGGAAGTTCTTCTATTC  1098

seq1  TTAGCTCCCAATAATATATCCTTAATACTATCAGAAA-CTAATTTTTAAA  1138
       ||||||| |  ||||||  ||| ||||||||||||| ||||||||||||
seq2  CTAGCTCCAATAAATATAATCTT-ATACTATCAGAAACCTAATTTTTAAA  1147

seq1  CTGTTACTTATATCATTTTATACTA-TTGTATGGA-ATTATCTTA--TTA  1184
      ||| |||| ||||   ||||||||| ||| ||||| |||||||||   ||
seq2  CTG-TACTGATATTCATTTATACTATTTGCATGGATATTATCTTAATATA  1196

seq1  TTAG  1188
      ||||
seq2  TTAG  1200


seq1: chr7_60991043_60992206
seq2: B6Ng01-294P14.g_67_1214 (reverse)

seq1  GCACACTATTGTAGTGTTAAAAACTTATGAGTTTCAAAGATTAATATTAG  50
      |||||||| ||||| |||| |    |||||||     |||||||| ||||
seq2  GCACACTA-TGTAGGGTTAGA---CTATGAGT----CAGATTAAT-TTAG  41

seq1  AAATTGAGTGCTTAAAATAGACTTTGAGAAGTTGATTGATAAGTGAGAAA  100
      ||| |||||   |||| ||||  ||||||   |||| ||| |||||||||
seq2  AAA-TGAGTTGCTAAATTAGAACTTGAGA--GTGATGGATTAGTGAGAAA  88

seq1  TTTGCCTAGATAGGCAGATATAGAGACATTTATTTATTTATTTATTTATT  150
       ||||||||||||||||||||||||||| | ||||||||| ||||||| |
seq2  -TTGCCTAGATAGGCAGATATAGAGACA-TAATTTATTTA-TTATTTA-T  134

seq1  TATTTATTTATTTATTTATTTGGAAATGTCAATTATTACTTCAGCCACAG  200
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TATTTATTTATTTA-TTATTTGGAAATGTCAATTATTACTTCAGCCACAG  183

seq1  CCTGAAAGTATAAGATCAGTACAGTATTCTTGCTATTGCATGTGTGTATT  250
       |||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  -CTGAAAGTATAAGATCAGTACAGTATTCTTGCTA-TGCATGTGTGTATT  231

seq1  T-CCATGTGTGTGTGTGTGTACTTTCTTAGTCTCCTATTTCCC-AATTCC  298
      | ||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TCCCATGTGTGTGTGTGTGTACTTTCTTAGTCTCCTATTTCCCAAATTCC  281

seq1  A-CTAATATTAAACATTTCATCAAATTGAAAACATATACATGGCTTTTTT  347
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAATATTAAACATTTCATCAAATTGAAAACATATACATGGCTTTTTT  331

seq1  TAAATTTATATATGATGACAAAATAGCTATACACTGAGTGATGAAACATT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTATATATGATGACAAAATAGCTATACACTGAGTGATGAAACATT  381

seq1  ATATGAACAGAAAATCAAACAGGATTAGGAACTCAAATAAATACACATTC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGAACAGAAAATCAAACAGGATTAGGAACTCAAATAAATACACATTC  431

seq1  TTTTTTTAAAATTCTGAAATAAAATATTCTATGAACATGCAAATTTCAAG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTAAAATTCTGAAATAAAATATTCTATGAACATGCAAATTTCAAG  481

seq1  ATATTTCCTGAATAAACATTTCTCCCTTTTCTCCATTGATCTTCATTAGT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTCCTGAATAAACATTTCTCCCTTTTCTCCATTGATCTTCATTAGT  531

seq1  ATTACCTTCCTGTTGTGTAATTACAAAGATGTATATTCTTTCTGTAACTG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACCTTCCTGTTGTGTAATTACAAAGATGTATATTCTTTCTGTAACTG  581

seq1  GTCATCTTCATCTATAAGACTACTTGATAGCATGAAGACATGGATGTAGT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATCTTCATCTATAAGACTACTTGATAGCATGAAGACATGGATGTAGT  631

seq1  TGGTGCAGTAACTCATCCCTTTGCCCAATAATAGCCAAAGGAAATAAAAC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGCAGTAACTCATCCCTTTGCCCAATAATAGCCAAAGGAAATAAAAC  681

seq1  AAATGATGTGATTGAAATTTTTTATTATCCTCAAACTGTACATTTTATGA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGATGTGATTGAAATTTTTTATTATCCTCAAACTGTACATTTTATGA  731

seq1  GTGAAATATTTCAAGACAGACATCCTACTTTCATATTTCAATATATTTTA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAATATTTCAAGACAGACATCCTACTTTCATATTTCAATATATTTTA  781

seq1  TCAAAACTTTCTCTTTGAGGAATAAAAGCAACCCTTTCCAATTATCTGAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAACTTTCTCTTTGAGGAATAAAAGCAACCCTTTCCAATTATCTGAA  831

seq1  TTCAAATCAAACAGGTATTTGTTTTGTTTGTCCTGATTTGCTTCTTAAAA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAATCAAACAGGTATTTGTTTTGTTTGTCCTGATTTGCTTCTTAAAA  881

seq1  CATTCTACCAAGTCTTGCTGTAGGAATTTTCAATTGGCATCTGAAAAGAC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTACCAAGTCTTGCTGTAGGAATTTTCAATTGGCATCTGAAAAGAC  931

seq1  ATTGTTTTGTGTCAAGATGAAAAATAACCTGAACTCAGTATTGATGAGAT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTTTGTGTCAAGATGAAAAATAACCTGAACTCAGTATTGATGAGAT  981

seq1  GGAGAGGTCACAGCAGCTAACTGCACCTGGGTGAGTCCCAGACTTGCTAT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGGTCACAGCAGCTAACTGCACCTGGGTGAGTCCCAGACTTGCTAT  1031

seq1  TATCACTGTCACAAAATTAATCAGAACAAGGAGAAGCCAGGGCATTCACC  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCACTGTCACAAAATTAATCAGAACAAGGAGAAGCCAGGGCATTCACC  1081

seq1  GTTCATCTTCCCTCTTAAAATGTGGACATGGTTCCAGCAGAAACACATAC  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATCTTCCCTCTTAAAATGTGGACATGGTTCCAGCAGAAACACATAC  1131

seq1  TGAAAAAAGATGAATTC  1164
      |||||||||||||||||
seq2  TGAAAAAAGATGAATTC  1148


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