BAC Information

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BAC

Clone NameB6Ng01-295A02
Chromosome7 (Build37)
Map Location 33,491,289 - 33,620,018
singlet/doubletdoublet
Overlap geneLOC100043845, LOC100043373, LOC668410, EG624439
Upstream geneEG626305, EG668342, EG626330, LOC100043340, LOC100043343, EG626358, LOC668351, EG384593, LOC100043351, LOC100043352, LOC100043353, EG384594, LOC100043838, EG668361, LOC668362, EG624584, LOC100043355, LOC546951, EG626740, EG668371, EG668377, LOC100043842, LOC634929, EG668379, EG668381, LOC668386, LOC626373, EG384589, EG668393, EG330689, LOC100043362, LOC100043365, EG384591, LOC668398, EG384596, LOC100043370, LOC434161, EG270499
Downstream geneLOC100043376, LOC100043379, LOC100043383, EG668411, LOC100043850, LOC100043386, LOC668416, EG668526, LOC100043388, LOC270234, EG668419, EG668422, EG546954, LOC100043856, LOC100043857, EG545947, EG434676, EG668431, Abpd, EG545948, LOC435963, LOC435962, EG626970, LOC100043859, LOC627004, LOC100043398, LOC100043401, Scgb2b1, LOC668440, Abpz, LOC100043860
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-295A02.bB6Ng01-295A02.g
ACCGA090987GA090988
length1,150974
definitionB6Ng01-295A02.b B6Ng01-295A02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(33,618,880 - 33,620,018)(33,491,289 - 33,492,261)
sequence
gaattccagatgacccttcaaccccctctacctgggcctgtattagagca
tctcccactgcacagggacatcaggggactgttggaagggtgctaagagg
caagactgtagtaggccccctgctccacccaccttggaagtggactgctt
aagcccattcactcagatagagagaaattgtcacccctggcattgccatt
ttaggcttcattaaagggttcttttgacagtcttttgtccttctttaaga
agtgtgggctgaacaaacaccaatggaggagcctgaagacagcagagaaa
agcctgaggcagacatgtgaaggctgaagggtcagcaggatgagctatga
aatctgccaagagtcttactgctctattatagttgaagtatttgacgggg
gaaatgcaggaaagagtaggtagggtcatggaatgaagagagaaagagga
agactctgaagaagaatacaatggatccagaggacaggataattagaacc
aaattgccagaagtggtctaggaatttgtacagtctttggagactacact
agggcctggagactcgtcatggcagattgccaaaaaggctcagcttcctg
tccatgctgtggaggaactgcagcacaggtaggcctcagggtgccatgct
agtaagaggactgctcaagagagcataccactgctgcctctaccacctgc
taccagttggagttagtctcttgctgttgtgtattcaaatgctaagtact
ggaccccaggagttggaattccccaaacctccaactacttgccaatctct
aacatattctcacaaacacaagatgttgcttagaaaattcgttcacctaa
atctctcactatctaagaaaatgtgactgccaggcaatgatggagagagg
agaggtattctgtgactttttttttctgggctgagtgtcacaggtagggg
atcataacgcaagaaaagaggagagaagaaggaggagatgatgggagaaa
ggggaagggcttgccatgggggctgatgtctcaggagcacatgaccagga
gctggtggaccatgagacaggcttgaatggagccagaaaataacctgggc
cacactttaaacagcaattaacatcagttcctatatggatgtatgcaagt

gaattcatgtggtctggcatagtaaaaagatccttttacttttaaccagt
aactcagaagataaagtcaaaagttctgttgtatttttattcaaatggtt
gttttaccattagttataggtatagagatggaagggttatgtacttgaga
ggccagaagagaacaagttttacagtcattgcaagccagctaaccagggt
tcacccttatgccaccaacttttcttgcactttttctatatcagagcccc
ttgattacaatatggagattctagatttttatacatttcaccaataatgt
tgtctcaggaccatactgggcataactgagtgaataactttgtttctagt
tactttgtattgcacaactgattttcttagataagctttactcctgatat
agattctttcaaccacaattgccagtgaatgtatagtcactttctagtgg
ggaaaatatcctggtatgcagagatgcatcagtgactaagaggtctaccg
gaggacaaggattctcagtacctactacagcttataactgtctttatgtc
cagttccagaggatccaaggagaccctcttctggtctctagctcacagag
acagtctcatggtaaccagacattcatgcaaacataatatagaattaaaa
taaatgtactttttaaatagcatttaacacaaatctacactctcacagta
aaaacttactgctttgcaaacattctgcatcagcaactcatatgaatacc
tgttactttgaaaatgactgactacagagacatgttttctatgggaatct
aagattgcttagagttggtgtctccatctcctcaactcaacagctttccc
ccagtctttccaatcataaaatcatgattctacttgggaattttttttca
ttgcactaacatacaataccctacacaactgcctttaatctctctctctc
tctctctctctctctctctctctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_33618880_33620018
seq2: B6Ng01-295A02.b_46_1195 (reverse)

seq1  ACTTGCATACCATCCATA---GGACTGATGTTAATTGCTGTTT-AAGTGT  46
      ||||||||| ||||||||   | |||||||||||||||||||| ||||||
seq2  ACTTGCATA-CATCCATATAGGAACTGATGTTAATTGCTGTTTAAAGTGT  49

seq1  TGCCCAGGGTTATTTCT-GCTCCAT--CAGCCTGTTCTCATGGTCCA-CA  92
       ||||||| |  ||||| |||||||   |||||| |||||||||||| ||
seq2  GGCCCAGGTTATTTTCTGGCTCCATTCAAGCCTG-TCTCATGGTCCACCA  98

seq1  GCTCCTGGTCATGTGCTCCTGAGACATCAGGCCCCATGGCA--GCCTTCC  140
      |||||||||||||||||||||||||||||| ||||||||||   ||||||
seq2  GCTCCTGGTCATGTGCTCCTGAGACATCAGCCCCCATGGCAAGCCCTTCC  148

seq1  CCTTTCT-CCATCTTCTTCCTCTTCTTCTCTCCTCTTTTCTTGCCTTATG  189
      ||||||| ||||| ||| |  ||||||||||||||||||||||| |||||
seq2  CCTTTCTCCCATCATCTCCTCCTTCTTCTCTCCTCTTTTCTTGCGTTATG  198

seq1  AT-CCCTACCTGTGACACTCAGCCCAG-AAAAAAAAGTCACAGAATACCT  237
      || |||||||||||||||||||||||| ||||||||||||||||||||||
seq2  ATCCCCTACCTGTGACACTCAGCCCAGAAAAAAAAAGTCACAGAATACCT  248

seq1  CTCCTCTCTCCATCATTGCCTGGCAGTCACATTTTCTTAGATAGTGAGAG  287
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCTCTCCATCATTGCCTGGCAGTCACATTTTCTTAGATAGTGAGAG  298

seq1  ATTTAGGTGAACGAATTTTCTAAGCAACATCTTGTGTTTGTGAGAATATG  337
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGGTGAACGAATTTTCTAAGCAACATCTTGTGTTTGTGAGAATATG  348

seq1  TTAGAGATTGGCAAGTAGTTGGAGGTTTGGGGAATTCCAACTCCTGGGGT  387
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAGATTGGCAAGTAGTTGGAGGTTTGGGGAATTCCAACTCCTGGGGT  398

seq1  CCAGTACTTAGCATTTGAATACACAACAGCAAGAGACTAACTCCAACTGG  437
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTACTTAGCATTTGAATACACAACAGCAAGAGACTAACTCCAACTGG  448

seq1  TAGCAGGTGGTAGAGGCAGCAGTGGTATGCTCTCTTGAGCAGTCCTCTTA  487
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGGTGGTAGAGGCAGCAGTGGTATGCTCTCTTGAGCAGTCCTCTTA  498

seq1  CTAGCATGGCACCCTGAGGCCTACCTGTGCTGCAGTTCCTCCACAGCATG  537
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCATGGCACCCTGAGGCCTACCTGTGCTGCAGTTCCTCCACAGCATG  548

seq1  GACAGGAAGCTGAGCCTTTTTGGCAATCTGCCATGACGAGTCTCCAGGCC  587
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGAAGCTGAGCCTTTTTGGCAATCTGCCATGACGAGTCTCCAGGCC  598

seq1  CTAGTGTAGTCTCCAAAGACTGTACAAATTCCTAGACCACTTCTGGCAAT  637
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTGTAGTCTCCAAAGACTGTACAAATTCCTAGACCACTTCTGGCAAT  648

seq1  TTGGTTCTAATTATCCTGTCCTCTGGATCCATTGTATTCTTCTTCAGAGT  687
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTCTAATTATCCTGTCCTCTGGATCCATTGTATTCTTCTTCAGAGT  698

seq1  CTTCCTCTTTCTCTCTTCATTCCATGACCCTACCTACTCTTTCCTGCATT  737
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTCTTTCTCTCTTCATTCCATGACCCTACCTACTCTTTCCTGCATT  748

seq1  TCCCCCGTCAAATACTTCAACTATAATAGAGCAGTAAGACTCTTGGCAGA  787
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCCGTCAAATACTTCAACTATAATAGAGCAGTAAGACTCTTGGCAGA  798

seq1  TTTCATAGCTCATCCTGCTGACCCTTCAGCCTTCACATGTCTGCCTCAGG  837
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATAGCTCATCCTGCTGACCCTTCAGCCTTCACATGTCTGCCTCAGG  848

seq1  CTTTTCTCTGCTGTCTTCAGGCTCCTCCATTGGTGTTTGTTCAGCCCACA  887
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCTCTGCTGTCTTCAGGCTCCTCCATTGGTGTTTGTTCAGCCCACA  898

seq1  CTTCTTAAAGAAGGACAAAAGACTGTCAAAAGAACCCTTTAATGAAGCCT  937
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTAAAGAAGGACAAAAGACTGTCAAAAGAACCCTTTAATGAAGCCT  948

seq1  AAAATGGCAATGCCAGGGGTGACAATTTCTCTCTATCTGAGTGAATGGGC  987
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGGCAATGCCAGGGGTGACAATTTCTCTCTATCTGAGTGAATGGGC  998

seq1  TTAAGCAGTCCACTTCCAAGGTGGGTGGAGCAGGGGGCCTACTACAGTCT  1037
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGCAGTCCACTTCCAAGGTGGGTGGAGCAGGGGGCCTACTACAGTCT  1048

seq1  TGCCTCTTAGCACCCTTCCAACAGTCCCCTGATGTCCCTGTGCAGTGGGA  1087
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCTTAGCACCCTTCCAACAGTCCCCTGATGTCCCTGTGCAGTGGGA  1098

seq1  GATGCTCTAATACAGGCCCAGGTAGAGGGGGTTGAAGGGTCATCTGGAAT  1137
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTCTAATACAGGCCCAGGTAGAGGGGGTTGAAGGGTCATCTGGAAT  1148

seq1  TC  1139
      ||
seq2  TC  1150

seq1: chr7_33491289_33492261
seq2: B6Ng01-295A02.g_67_1040

seq1  GAATTCATGTGGTCTGGCATAGTAAAAAGATCCTTTTACTTTTAACCAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGTGGTCTGGCATAGTAAAAAGATCCTTTTACTTTTAACCAGT  50

seq1  AACTCAGAAGATAAAGTCAAAAGTTCTGTTGTATTTTTATTCAAATGGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCAGAAGATAAAGTCAAAAGTTCTGTTGTATTTTTATTCAAATGGTT  100

seq1  GTTTTACCATTAGTTATAGGTATAGAGATGGAAGGGTTATGTACTTGAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTACCATTAGTTATAGGTATAGAGATGGAAGGGTTATGTACTTGAGA  150

seq1  GGCCAGAAGAGAACAAGTTTTACAGTCATTGCAAGCCAGCTAACCAGGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGAAGAGAACAAGTTTTACAGTCATTGCAAGCCAGCTAACCAGGGT  200

seq1  TCACCCTTATGCCACCAACTTTTCTTGCACTTTTTCTATATCAGAGCCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCCTTATGCCACCAACTTTTCTTGCACTTTTTCTATATCAGAGCCCC  250

seq1  TTGATTACAATATGGAGATTCTAGATTTTTATACATTTCACCAATAATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTACAATATGGAGATTCTAGATTTTTATACATTTCACCAATAATGT  300

seq1  TGTCTCAGGACCATACTGGGCATAACTGAGTGAATAACTTTGTTTCTAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCAGGACCATACTGGGCATAACTGAGTGAATAACTTTGTTTCTAGT  350

seq1  TACTTTGTATTGCACAACTGATTTTCTTAGATAAGCTTTACTCCTGATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTGTATTGCACAACTGATTTTCTTAGATAAGCTTTACTCCTGATAT  400

seq1  AGATTCTTTCAACCACAATTGCCAGTGAATGTATAGTCACTTTCTAGTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTCTTTCAACCACAATTGCCAGTGAATGTATAGTCACTTTCTAGTGG  450

seq1  GGAAAATATCCTGGTATGCAGAGATGCATCAGTGACTAAGAGGTCTACCG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAATATCCTGGTATGCAGAGATGCATCAGTGACTAAGAGGTCTACCG  500

seq1  GAGGACAAGGATTCTCAGTACCTACTACAGCTTATAACTGTCTTTATGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGACAAGGATTCTCAGTACCTACTACAGCTTATAACTGTCTTTATGTC  550

seq1  CAGTTCCAGAGGATCCAAGGAGACCCTCTTCTGGTCTCTAGCTCACAGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCCAGAGGATCCAAGGAGACCCTCTTCTGGTCTCTAGCTCACAGAG  600

seq1  ACAGTCTCATGGTAACCAGACATTCATGCAAACATAATATAGAATTAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTCTCATGGTAACCAGACATTCATGCAAACATAATATAGAATTAAAA  650

seq1  TAAATGTACTTTTTAAATAGCATTTAACACAAATCTACACTCTCACAGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGTACTTTTTAAATAGCATTTAACACAAATCTACACTCTCACAGTA  700

seq1  AAAACTTACTGCTTTGCAAACATTCTGCATCAGCAACTCATATGAATACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTTACTGCTTTGCAAACATTCTGCATCAGCAACTCATATGAATACC  750

seq1  TGTTACTTTGAAAATGACTGACTACAGAGACATGTTTTCTATGGGAATCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTACTTTGAAAATGACTGACTACAGAGACATGTTTTCTATGGGAATCT  800

seq1  AAGATTGCTTAGAGTTGGTGTCTCCATCTCCTCAACTCAACAGCTTTCCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTGCTTAGAGTTGGTGTCTCCATCTCCTCAACTCAACAGCTTTCCC  850

seq1  CCAGTCTTTCCAATCATAAAATCATGATTCTACTT-GGAATTTTTTTTCA  899
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CCAGTCTTTCCAATCATAAAATCATGATTCTACTTGGGAATTTTTTTTCA  900

seq1  TTGCACTAACATACAATACCCTACACAACTGCCTTTAATCTCTCTCTCTC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCACTAACATACAATACCCTACACAACTGCCTTTAATCTCTCTCTCTC  950

seq1  TCTCTCTCTCTCTCTCTCTCTCTC  973
      ||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCTCTCTCTCTC  974