BAC Information

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BAC

Clone NameB6Ng01-295J12
Chromosome7 (Build37)
Map Location 66,056,631 - 66,057,381
singlet/doubletsinglet
Overlap geneAtp10a
Upstream geneGabrb3, EG668807, LOC434189
Downstream geneLOC621446, LOC668811, LOC668813, LOC668815, EG668818, Ube3a, LOC100040985, LOC100041010, LOC100041029, LOC100041051, Pwcr1, LOC664788
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-295J12.bB6Ng01-295J12.g
ACCGA091420GA091421
length7531,168
definitionB6Ng01-295J12.b B6Ng01-295J12.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtctgctctggccttctttctctgggagcaaggacagaaagca
tattcactgtagccctctgcccagcagggtctcacatgctgctacctact
acagcagttaagctttttattctcttttctctctctctctctctcataaa
caaccagagaatcacatttcccccgtttctcaataaaatataatttttat
tggaaaaatataattccaaaagtgtaaaggaaataacacttaacactcta
taaaaaatacacattgatatcaagaagagaaactgtattccccattggga
gcctcacaggttgtgagcagcaacagcagtctcccagtatctggccagtt
cctgctctctcaatccctctgtatttgaaagttggtgaacatgtaggcca
tcattctagacggtggtaggagctgtcactctggcacttgtctgccccac
cctggctcagtctcagcatccttctgcgtggatccctctacaagcagtgt
aggtactggcagccttcatcccacttctgaatatactggtgttccattat
ctatggtgctgaacaccagacacagaatttccccctattaataggtaggt
aactaaccccagagattgctgtagaatatggggggggggataaggaggct
tttggcatgagtatgacattacaggcattgggaatattataactttagcc
tgagtcagcagaccctggtcttcagtccaagacatgagaaagactatggg
tga
gaattccttaggatttgtatgtacttagtagtttcagagaatggggaaat
ggaagaagtgagatactgaaagaagagaatgatgggattttcttcattgg
tgtaacccatgctcctgtaaagaacttctcaccaatgtccctacaagttt
cctaatgaaactcattggttgatgaagttatatttggatataatcatttc
tgtggtgtgccactggccttcctaagaaaagttcatacaataaggaaaca
ttattatatcaaatcaataggatgttatttagagtttctgtaagcgagtt
ttaaaattatttaggaaaaaaactagctgaacagtctaaaaatatgtttt
taaaaagtctgaatataaaatagcatttgtcaacatcaatttggaaatgg
cttgatttcaagctactataataaccacaatgacctaataaagcatgcat
atttagcagaacaggggagcatgtcctgaatgtataaatatgatgaggtg
agttaaagagaaatacagatatttttaaatgatatggagcctgaattgac
catctcctataaccaggcaaggcttcctgtggagggattgggacaccaac
ccagccacaaaaccttcaacctataatttgtcatggtagcaagacgtgct
gagataaaagtgattcagaagttgtaggagtggctagccagtgactgttc
cagcttgagacccatgccataaaagagaacccactcataacactgcctag
aagaccaggagccagaagctggatagcccagagacccagaatagagctaa
atagaacttgttaaataaaagtcaatgaaaatgattcctaacaatatttt
gctatactcatagaatggttcctagtccagttgtcattagagaggcttca
cctagcaactgatggaaacagatacagacacccacaggccaaacattagg
cagaatttcagggaatactgcagaggagaggggagaaaagattataggag
cagagggtcaggtatacacaggaaacctacagacactaactgggccatag
ggctcagagagactaaactagggagcactaagggagcaccatgggggctg
acataggttcctctgcaatgtatcaaggtagtagctagctttatcctctc
ccgaaggcaggatttttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_66056631_66057381
seq2: B6Ng01-295J12.b_46_798

seq1  GAATTCAGTCTGCTCTGGCCTTCTTTCTCTGGGAGCAAGGACAGAAAGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTCTGCTCTGGCCTTCTTTCTCTGGGAGCAAGGACAGAAAGCA  50

seq1  TATTCACTGTAGCCCTCTGCCCAGCAGGGTCTCACATGCTGCTACCTACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCACTGTAGCCCTCTGCCCAGCAGGGTCTCACATGCTGCTACCTACT  100

seq1  ACAGCAGTTAAGCTTTTTATTCTCTTTTCTCTCTCTCTCTCTCTCATAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAGTTAAGCTTTTTATTCTCTTTTCTCTCTCTCTCTCTCTCATAAA  150

seq1  CAACCAGAGAATCACATTTCCCCCGTTTCTCAATAAAATATAATTTTTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCAGAGAATCACATTTCCCCCGTTTCTCAATAAAATATAATTTTTAT  200

seq1  TGGAAAAATATAATTCCAAAAGTGTAAAGGAAATAACACTTAACACTCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAAATATAATTCCAAAAGTGTAAAGGAAATAACACTTAACACTCTA  250

seq1  TAAAAAATACACATTGATATCAAGAAGAGAAACTGTATTCCCCATTGGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAATACACATTGATATCAAGAAGAGAAACTGTATTCCCCATTGGGA  300

seq1  GCCTCACAGGTTGTGAGCAGCAACAGCAGTCTCCCAGTATCTGGCCAGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCACAGGTTGTGAGCAGCAACAGCAGTCTCCCAGTATCTGGCCAGTT  350

seq1  CCTGCTCTCTCAATCCCTCTGTATTTGAAAGTTGGTGAACATGTAGGCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCTCTCTCAATCCCTCTGTATTTGAAAGTTGGTGAACATGTAGGCCA  400

seq1  TCATTCTAGACGGTGGTAGGAGCTGTCACTCTGGCACTTGTCTGCCCCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCTAGACGGTGGTAGGAGCTGTCACTCTGGCACTTGTCTGCCCCAC  450

seq1  CCTGGCTCAGTCTCAGCATCCTTCTGCGTGGATCCCTCTACAAGCAGTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCTCAGTCTCAGCATCCTTCTGCGTGGATCCCTCTACAAGCAGTGT  500

seq1  AGGTACTGGCAGCCTTCATCCCACTTCTGAATATACTGGTGTTCCATTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTACTGGCAGCCTTCATCCCACTTCTGAATATACTGGTGTTCCATTAT  550

seq1  CTATGGTGCTGAACACCAGACACAGAATTTCCCCCTATTAATAGGTAGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGGTGCTGAACACCAGACACAGAATTTCCCCCTATTAATAGGTAGGT  600

seq1  AACTAACCCCAGAGATTGCTGTAGAATATGGGGGGGGGGATAAGGAGGC-  649
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AACTAACCCCAGAGATTGCTGTAGAATATGGGGGGGGGGATAAGGAGGCT  650

seq1  TTTGGCATGAGTATGACATTACAGGCATTGGGAATATTATAACTTTAGCC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGCATGAGTATGACATTACAGGCATTGGGAATATTATAACTTTAGCC  700

seq1  TGAGTCAGCAGACCCTGG-CTTCAGTCCAAGACATGAG-AAGACTAATGG  747
      |||||||||||||||||| ||||||||||||||||||| |||||| ||||
seq2  TGAGTCAGCAGACCCTGGTCTTCAGTCCAAGACATGAGAAAGACT-ATGG  749

seq1  GTGA  751
      ||||
seq2  GTGA  753