BAC Information

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BAC

Clone NameB6Ng01-295P08
Chromosome7 (Build37)
Map Location 105,672,296 - 105,763,762
singlet/doubletdoublet
Overlap geneA630091E08Rik, 2210018M11Rik
Upstream geneInts4, 1810020D17Rik, Rsf1, LOC622994, LOC100040211, Clns1a, Aqp11, LOC100040594, Pak1, Gdpd4, Myo7a, Capn5, Omp, B3gnt6, Phca, Tsku, LOC100040269, Gucy2d, LOC100040721, EG434215
Downstream geneLOC100040769, Prkrir, Wnt11, LOC666978, Uvrag, EG666529, Dgat2, Mogat2, Mtap6, Serpinh1, Gdpd5, 2810406K13Rik, Rps3, Rnu15-b, EG449630, Arrb1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-295P08.bB6Ng01-295P08.g
ACCGA091694GA091695
length1,128273
definitionB6Ng01-295P08.b B6Ng01-295P08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(105,762,623 - 105,763,762)(105,672,296 - 105,672,568)
sequence
gaattccgctggtttagctgcaggaagacttggaggaattctgttcctgc
ttatggttagtagataagcattgatttaggctggaaaaaagagaaatatt
tgagtttaaaataaaatttatagatagggatttgttacttaaagtttgtt
gtttattttttattttcccattttaggttctgatggcaattgttaagagg
ttagaggtagacacacttaggctttgtgtctcactttgtagtttggctat
gggtgacttatctaaccagtgcaatattttatttcttcatgcctacattg
ggtgatgataggtgttttgaaagtgcttaaagcagtgtctaacacatgag
aagttctcagtcattgatttcttactgttcttggtatttaagcactcaga
ctcagtagcatccttacctttcctgacctcactagaagacagataaacgc
ttatgtatcacagtcttttataatgctgaaagtggtccagattaggcctt
ttctgaattcacattagtaagtcaacagaaaagctaggattctgtagtat
ttggatttataaaaggatgttatctgctatgggagatctcagatcacatg
tgaattttttctaatagatatttagcagtagtttagcaggcagtgctagt
aaaatgagatcagcctatgggaccatcttcttcaacacacatagtgtgta
tttataccctacctgcatcttgtgcaggtccaccacacatgagctttctc
agataatactctgcaggctggctttgtttgggtcacagtgcttggaacag
gctgacaagctgtttacagatcagcaggatcaatcacagatctttctgag
aatgctgcttgcaaacaatatgtgagacttgattggagacactttgtttc
ttttggatagttgtagttgatagttaaggttattaatttttgaacttgga
tttagatctgaattctcaatggtttgctttttagaaagcttacctgaatg
ctctcagtttacccaatgcttaaatttaaagcccacacatctgtgataat
gatactaaattagaaatgacatggtgaaaaattgcaccttttatttatat
ttgaatttaaattataataaagttacta
caaccccagccaggagaaccatctccactgcctctctttagccagatagc
tacaggcaagcatggggcctccactgccagtggcagccatcttgcattaa
ggccaagggagcaacaaccatcctggaaactagctaaggccaggagagac
agagcagcctgctgactgcagctgtgcattttggggtggggtgggaggat
gcagccttagactgcagccaggtgacacgtgacatctatttagctccgga
gggcagggggggggagtgggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_105762623_105763762
seq2: B6Ng01-295P08.b_48_1175 (reverse)

seq1  TAGTAATTTTATTATTAATTTTTAAATTAAAATTAATAAAATTAAAAGGG  50
      |||||| |||||||| |   |||||||| ||||  |||||  ||||||| 
seq2  TAGTAACTTTATTATAA---TTTAAATTCAAAT--ATAAA--TAAAAGG-  42

seq1  TTGGCAATTTTCACATTGTCATTTTCTTAATTTTTAGTTATCATTATCAC  100
       ||  | |||||||  ||||||||   |||  ||||| ||||||||||||
seq2  -TGCAATTTTTCACCATGTCATTT--CTAA--TTTAG-TATCATTATCAC  86

seq1  AGATGTGTGGGCTTTTAAATTTAGCATTTGGTAAACTGAGAGCAATCAGG  150
      ||||||||||||||| || || |||||| ||||||||||||||| |||||
seq2  AGATGTGTGGGCTTTAAATTTAAGCATTGGGTAAACTGAGAGCATTCAGG  136

seq1  TAAGCTTTCTAAAAAGC-AACCATTGAGAATTCAGATCTAAATCCAAGTT  199
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TAAGCTTTCTAAAAAGCAAACCATTGAGAATTCAGATCTAAATCCAAGTT  186

seq1  CAAAAATTAATAACC-TAACTATCAACTACAACTATCCAAAAGAAACAAA  248
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CAAAAATTAATAACCTTAACTATCAACTACAACTATCCAAAAGAAACAAA  236

seq1  GTGTCTCCAATCAAGTCTCACATATTGTTTGCAAGCAGCATTCTCAGAAA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTCCAATCAAGTCTCACATATTGTTTGCAAGCAGCATTCTCAGAAA  286

seq1  GATCTGTGATTGATCCTGCTGATCTGTAAACAGCTTGTCAGCCTGTTCCA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTGTGATTGATCCTGCTGATCTGTAAACAGCTTGTCAGCCTGTTCCA  336

seq1  AGCACTGTGACCCAAACAAAGCCAGCCTGCAGAGTATTATCTGAGAAAGC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTGTGACCCAAACAAAGCCAGCCTGCAGAGTATTATCTGAGAAAGC  386

seq1  TCATGTGTGGTGGACCTGCACAAGATGCAGGTAGGGTATAAATACACACT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTGTGGTGGACCTGCACAAGATGCAGGTAGGGTATAAATACACACT  436

seq1  ATGTGTGTTGAAGAAGATGGTCCCATAGGCTGATCTCATTTTACTAGCAC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTGTTGAAGAAGATGGTCCCATAGGCTGATCTCATTTTACTAGCAC  486

seq1  TGCCTGCTAAACTACTGCTAAATATCTATTAGAAAAAATTCACATGTGAT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGCTAAACTACTGCTAAATATCTATTAGAAAAAATTCACATGTGAT  536

seq1  CTGAGATCTCCCATAGCAGATAACATCCTTTTATAAATCCAAATACTACA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGATCTCCCATAGCAGATAACATCCTTTTATAAATCCAAATACTACA  586

seq1  GAATCCTAGCTTTTCTGTTGACTTACTAATGTGAATTCAGAAAAGGCCTA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCCTAGCTTTTCTGTTGACTTACTAATGTGAATTCAGAAAAGGCCTA  636

seq1  ATCTGGACCACTTTCAGCATTATAAAAGACTGTGATACATAAGCGTTTAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGGACCACTTTCAGCATTATAAAAGACTGTGATACATAAGCGTTTAT  686

seq1  CTGTCTTCTAGTGAGGTCAGGAAAGGTAAGGATGCTACTGAGTCTGAGTG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTTCTAGTGAGGTCAGGAAAGGTAAGGATGCTACTGAGTCTGAGTG  736

seq1  CTTAAATACCAAGAACAGTAAGAAATCAATGACTGAGAACTTCTCATGTG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAATACCAAGAACAGTAAGAAATCAATGACTGAGAACTTCTCATGTG  786

seq1  TTAGACACTGCTTTAAGCACTTTCAAAACACCTATCATCACCCAATGTAG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGACACTGCTTTAAGCACTTTCAAAACACCTATCATCACCCAATGTAG  836

seq1  GCATGAAGAAATAAAATATTGCACTGGTTAGATAAGTCACCCATAGCCAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGAAGAAATAAAATATTGCACTGGTTAGATAAGTCACCCATAGCCAA  886

seq1  ACTACAAAGTGAGACACAAAGCCTAAGTGTGTCTACCTCTAACCTCTTAA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACAAAGTGAGACACAAAGCCTAAGTGTGTCTACCTCTAACCTCTTAA  936

seq1  CAATTGCCATCAGAACCTAAAATGGGAAAATAAAAAATAAACAACAAACT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTGCCATCAGAACCTAAAATGGGAAAATAAAAAATAAACAACAAACT  986

seq1  TTAAGTAACAAATCCCTATCTATAAATTTTATTTTAAACTCAAATATTTC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTAACAAATCCCTATCTATAAATTTTATTTTAAACTCAAATATTTC  1036

seq1  TCTTTTTTCCAGCCTAAATCAATGCTTATCTACTAACCATAAGCAGGAAC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTTCCAGCCTAAATCAATGCTTATCTACTAACCATAAGCAGGAAC  1086

seq1  AGAATTCCTCCAAGTCTTCCTGCAGCTAAACCAGCGGAATTC  1140
      ||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTCCTCCAAGTCTTCCTGCAGCTAAACCAGCGGAATTC  1128

seq1: chr7_105672296_105672568
seq2: B6Ng01-295P08.g_71_343

seq1  CAACCCCAGCCAGGAGAACCATCTCCACTGCCTCTCTTTAGCCAGATAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCCCAGCCAGGAGAACCATCTCCACTGCCTCTCTTTAGCCAGATAGC  50

seq1  TACAGGCAAGCATGGGGCCTCCACTGCCAGTGGCAGCCATCTTGCATTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGCAAGCATGGGGCCTCCACTGCCAGTGGCAGCCATCTTGCATTAA  100

seq1  GGCCAAGGGAGCAACAACCATCCTGGAAACTAGCTAAGGCCAGGAGAGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAAGGGAGCAACAACCATCCTGGAAACTAGCTAAGGCCAGGAGAGAC  150

seq1  AGAGCAGCCTGCTGACTGCAGCTGTGCATTTTGGGGTGGGGTGGGAGGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAGCCTGCTGACTGCAGCTGTGCATTTTGGGGTGGGGTGGGAGGAT  200

seq1  GCAGCCTTAGACTGCAGCCAGGTGACACGTGACATCTATTTAGCTCCGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCCTTAGACTGCAGCCAGGTGACACGTGACATCTATTTAGCTCCGGA  250

seq1  GGGCAGGGGGGGGGAGTGGGGGG  273
      |||||||||||||||||||||||
seq2  GGGCAGGGGGGGGGAGTGGGGGG  273