BAC Information

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BAC

Clone NameB6Ng01-297B22
Chromosome7 (Build37)
Map Location 28,756,044 - 28,757,149
singlet/doubletsinglet
Overlap geneZfp780b
Upstream geneCyp2a12, LOC100043199, Cyp2f2, Gm1450, Egln2, Rab4b, Mia1, Snrpa, Itpkc, Adck4, Numbl, Ltbp4, Shkbp1, Spnb4, Blvrb, EG668045, Sertad3, Sertad1, Prx, Hipk4, Pld3, 2310022A10Rik, Akt2, Ttc9b, Map3k10, C030039L03Rik, Zfp60, LOC100043229, LOC100043233, 4933426I21Rik, Zfp59, 4732475C15Rik, Prkcz2, 1700049G17Rik, EG668175, LOC100043771
Downstream geneC130069I09Rik, LOC100043772, Psmc4, LOC100043774, 9530053A07Rik, Fbl, Dyrk1b, Eid2, LOC434156, BC089491, Dll3, Timm50, Supt5h, Rps16, Plekhg2, Zfp36, Ixl, Paf1, Samd4b, 1700085B13Rik, Gmfg, Lrfn1, LOC624672, 1700028B04Rik, EG330496, Il28, Sycn, 1190020J12Rik, Pak4, C330005M16Rik, Fbxo27, Fbxo17, Mrps12, Sars2, EG624918, Nfkbib, Sirt2, 5830482F20Rik, Hnrpl, Ech1, Lgals4, Lgals7, Capn12, Actn4, Eif3s12
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-297B22.bB6Ng01-297B22.g
ACCGA092560GA092561
length1,0551,102
definitionB6Ng01-297B22.b B6Ng01-297B22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacattgttgaagaatcttaactgatgtgggaagaccttaaattg
aatagaaaacttggtttgacattctgaatttaatattagtaataaatctt
aagatgtaaggaatgaaaaaaaaaagatgtaaggaatgtggaaaggcctt
cagtaattccaaactaactgtctatcagagaatcctactggagagaaatt
ctatgactttaacaagtaaggtgacaagatgtttagatttagttcagctt
tcatgcacagtggcaaattcatacaggggggacaccctatcactggaaag
aatgtggaaagaccttcaattgcagcgcaggccttcatcataaaagaacc
tatgcttgtgtcaaacactatgaaagcaaggaatgtgggaacatttgtag
aataagctgttaaagctcatcagagtctgtgtaggtctgaaacccagtga
ttgggaagactcaggaaaagcctttcttgaaaatggtaagcttatacaaa
atcagaaaattcataattgtcaggagtcttctgcatgtaaaaaaaggtgg
acaagccattgcatgaaaatcctgttacttaaaagaatgtggaaacttta
agctgccactggatctggttagcatcacagtattcagatcctcttgatga
caggaaaccctttagagaatgtaaggggctagagataaagattcctcttt
aatataaatggcccattttaaagttcattgttgtcttttttgactctgca
ccaagtgaaggacaacaaattttgcttcatgaagttgctgctgttagaat
cttgtcacatcaaaatgagcagacaatccacattgtgacactgagcaaac
aattttcttgaatcctttattgtaagggtagagagttaatatctgaaaac
acttgagattattaaatgaatgtgccatagtgtttgggcaaggtcttaga
tgtcatcactctgttaaacaggagtcatgaagtattatcctaacccataa
tgtaatatgaactatggttaatggcattttacttcttaagcgaaagtcga
ctgag
gaattcttacccaggttgctttttcttccttctctgaattcttttcctca
gcattattttggcttctagaagcttttaatccgtttttccaagataaggg
tcttgctatgcagggtaaatggtatggctcatttcctccatgctggcctc
acaaagcatgatccactgagcccagctgtatagatctttataataaatgt
gtatttttaaaatctacacaagcagggaatagtggcctttagtcccagcg
tttgggaggcagaggcaagcagatcatgtaaattcaaggccaggctgatg
taatatgttctctatatcctgggattattaaaagagacccagtcccaatg
aatgaatgaatgaatgaatgaaaatctacacaatgagtcatctctttctt
tcgtttaagtgggacgttgcatttccaagccagatctgatcgtcttacta
gagcaggagaaagagccctggatggctgtgaaggaagaaacagacaggcc
gagcccaggtgagtaagagtgaagtgattcattattggttgtgtgcgcac
acacgtgtgcaggtatcctaagaggccctagagagggtcagctccctggg
ctggagttataggggctgctgggtctctaacccagggcctcgggcagagc
tctcagagttcttgaccactgaaccaaagccaagacggtttcagcagcat
tgacagctgtaacgcagggaggggcaccaaatgtctgaattctgtgtctt
cgtggtcactgtagtcacggtgtgatggtggcgcctccctgcagcactgg
ggaggtggcaaggcagatcccttgggcttgctggcaagtcagctccaggc
aatgagagaccctgactcacaagcacagatggacagccagggggacatct
gagtgcatataccacacagccttctacctagcttgggcaggagctgttga
tggtttttctagttcgcaattgactaggactaactaaaatccaggcatct
gagtaccacctatgagcagattttgttagtaagtaatttgaagtaggaga
cccaccttttatccacatccttttgagattgggagaccaacgttaacatc
tg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_28756044_28757149
seq2: B6Ng01-297B22.g_67_1168 (reverse)

seq1  CAGATG-TAAGGTGGGTCTTCCCATCTCAAAA-GATGTGGATTAAAGGTG  48
      |||||| ||| || ||||| || ||||||||| ||||||||| |||||||
seq2  CAGATGTTAACGTTGGTCTCCCAATCTCAAAAGGATGTGGATAAAAGGTG  50

seq1  GGTCTTCCTACTTTAAATACTTTACTTAACAAAAATCT-CTCATAGGT-G  96
      |||| |||||||| ||||   |||| |||| ||||||| ||||||||| |
seq2  GGTC-TCCTACTTCAAATTACTTAC-TAAC-AAAATCTGCTCATAGGTGG  97

seq1  TACTCAGATGCTTGGATTTTAGTTAGTTCCTAGTCAATTTGCCAACTAAG  146
      ||||||||||| |||||||||||||| |||||||||| |||| |||||  
seq2  TACTCAGATGCCTGGATTTTAGTTAG-TCCTAGTCAA-TTGCGAACTAGA  145

seq1  AAAACCATC-ACAGCTCCCTGCCAAGCTAGGTAGAAGGCTGTGTGGTATA  195
      ||||||||| ||||||||   |||||||||||||||||||||||||||||
seq2  AAAACCATCAACAGCTCCTGCCCAAGCTAGGTAGAAGGCTGTGTGGTATA  195

seq1  TGCACTCAGATGTCCCCCTGGCTTGTCCATCTGTGCTTTGTGAGTCAGGG  245
      |||||||||||||||||||||| ||||||||||||| |||||||||||||
seq2  TGCACTCAGATGTCCCCCTGGC-TGTCCATCTGTGC-TTGTGAGTCAGGG  243

seq1  TCTCTCATTTGCCTGGAGCTGACTTGCCAGCAAGCCCAAGGGATCTGCCT  295
      ||||||| ||||||||||||||||||||||||||||||||||||||||| 
seq2  TCTCTCA-TTGCCTGGAGCTGACTTGCCAGCAAGCCCAAGGGATCTGCC-  291

seq1  TTGCCACCTCCCCAGTGCTGCAGGGAGGCGCCACCATCACACCGTGACTA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCACCTCCCCAGTGCTGCAGGGAGGCGCCACCATCACACCGTGACTA  341

seq1  CAGTGACCACGAAGACACAGAATTCAGACATTTGGTGCCCCTCCCTGCGT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGACCACGAAGACACAGAATTCAGACATTTGGTGCCCCTCCCTGCGT  391

seq1  TACAGCTGTCAATGCTGCTGAAACCGTCTTGGCTTTGGTTCAGTGGTCAA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGCTGTCAATGCTGCTGAAACCGTCTTGGCTTTGGTTCAGTGGTCAA  441

seq1  GAACTCTGAGAGCTCTGCCCGAGGCCCTGGGTTAGAGACCCAGCAGCCCC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCTGAGAGCTCTGCCCGAGGCCCTGGGTTAGAGACCCAGCAGCCCC  491

seq1  TATAACTCCAGCCCAGGGAGCTGACCCTCTCTAGGGCCTCTTAGGATACC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACTCCAGCCCAGGGAGCTGACCCTCTCTAGGGCCTCTTAGGATACC  541

seq1  TGCACACGTGTGTGCGCACACAACCAATAATGAATCACTTCACTCTTACT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACACGTGTGTGCGCACACAACCAATAATGAATCACTTCACTCTTACT  591

seq1  CACCTGGGCTCGGCCTGTCTGTTTCTTCCTTCACAGCCATCCAGGGCTCT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTGGGCTCGGCCTGTCTGTTTCTTCCTTCACAGCCATCCAGGGCTCT  641

seq1  TTCTCCTGCTCTAGTAAGACGATCAGATCTGGCTTGGAAATGCAACGTCC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCTGCTCTAGTAAGACGATCAGATCTGGCTTGGAAATGCAACGTCC  691

seq1  CACTTAAACGAAAGAAAGAGATGACTCATTGTGTAGATTTTCATTCATTC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTAAACGAAAGAAAGAGATGACTCATTGTGTAGATTTTCATTCATTC  741

seq1  ATTCATTCATTCATTGGGACTGGGTCTCTTTTAATAATCCCAGGATATAG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATTCATTCATTGGGACTGGGTCTCTTTTAATAATCCCAGGATATAG  791

seq1  AGAACATATTACATCAGCCTGGCCTTGAATTTACATGATCTGCTTGCCTC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACATATTACATCAGCCTGGCCTTGAATTTACATGATCTGCTTGCCTC  841

seq1  TGCCTCCCAAACGCTGGGACTAAAGGCCACTATTCCCTGCTTGTGTAGAT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCCCAAACGCTGGGACTAAAGGCCACTATTCCCTGCTTGTGTAGAT  891

seq1  TTTAAAAATACACATTTATTATAAAGATCTATACAGCTGGGCTCAGTGGA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAATACACATTTATTATAAAGATCTATACAGCTGGGCTCAGTGGA  941

seq1  TCATGCTTTGTGAGGCCAGCATGGAGGAAATGAGCCATACCATTTACCCT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGCTTTGTGAGGCCAGCATGGAGGAAATGAGCCATACCATTTACCCT  991

seq1  GCATAGCAAGACCCTTATCTTGGAAAAACGGATTAAAAGCTTCTAGAAGC  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAGCAAGACCCTTATCTTGGAAAAACGGATTAAAAGCTTCTAGAAGC  1041

seq1  CAAAATAATGCTGAGGAAAAGAATTCAGAGAAGGAAGAAAAAGCAACCTG  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATAATGCTGAGGAAAAGAATTCAGAGAAGGAAGAAAAAGCAACCTG  1091

seq1  GGTAAGAATTC  1106
      |||||||||||
seq2  GGTAAGAATTC  1102