BAC Information

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BAC

Clone NameB6Ng01-297E15
Chromosome7 (Build37)
Map Location 9,717,732 - 9,718,912
singlet/doubletsinglet
Overlap geneEG665582
Upstream geneLOC100041989, LOC100041998, LOC100042009, LOC100042754, V2r14, EG628128, EG434109, LOC434110, EG628145, EG545909, LOC100042039, LOC100042781, LOC665539, LOC100042795, LOC100042060, EG665552, LOC100042790, LOC100042803, LOC665598, LOC100042810, LOC665593
Downstream geneEG434113, EG665577, LOC665571, LOC100042083, Gm1961, V2r4, LOC100042848, LOC100042096, LOC100042870, LOC100042105, LOC100042859, LOC100042113, LOC100042120, LOC100042126, LOC100042139, LOC100042894, Vmn2r47, 2810047C21Rik, LOC665625, LOC545911, EG625580, LOC100042163, LOC625605, EG434117, EG628152, LOC100042921
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-297E15.bB6Ng01-297E15.g
ACCGA092682GA092683
length1,2191,179
definitionB6Ng01-297E15.b B6Ng01-297E15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtatcttgcaggaaattggtctgaaagattcgatgagaccc
ttgaggccctgagagctgctgttctcaggataaacttgacacgagtggac
ctgtcattgacagagggtctctcctcctggatttcatctgctttttctta
ttttaaggaatgggtgggggtagttttatttgctgctgccatctgctgtg
ggcttgtgtttatgctttgcttagtttctaagctcagaacccaacaaaac
cttgacaaagttgtgattggtcaagcacttgctgccattgaacaaggggc
ctcccctgaaatttggctgtccatgcttaagacctaaatggcatctgagt
tctctgctaatgtgtcccacggatttgtggatacattgcactgggatgta
agagactcaacgctcattgatcagcacttacacctcactgaggtttacta
attcgttttttggctggcctcttttatagagttcgccctaggtcatttag
cagttactgtcacacagtactgcggtatccagagacgggcaactttcctc
atgcacagaccatcctaagacacgggacccggtggcgatagggttaccct
atgacaggaaaggctgtgacattggaggaatgacctaagacaggagccac
agcagatggacatgactgcagaggcctagaccagcctcaaattttaataa
aataaaaggggggagatgtggagagccagccgtgccgtgagcaatcacca
ttataagatggtgctggcttccactgcacctaactagtaaacaagcctta
tgcgcaagtgcaagagtgaactcacgcctagtcactgcccatctcggggc
atagtaatggggtgatgggtgatcacgtatcagagctgtcatgccacatc
agtgatgagacattacactgcaggctatataagcagcgccattttcccgg
ttcgtggtcttccctctgattaagtaagcaataaagctttgccgcaaaag
attctggttgtcctggagtgtgttcttgccggcgggaaaaaacttgggcc
aataagtttttgttgtcttattaatgcttcatcaaggtattgggtaaagg
tagaaaaatgtaatgtatatcactcctgaattcagcctatttggcggtgg
gtaacaactgaaagtcggatggcgcatacagagcctaagaaaaagcttgc
cctcattcctgaattttcc
gaattccttttacagtttgacattaatagtttataggtgcttcttcttat
gtttgttcacatgcaaatgtggaataaataatttgtatcagtagttccag
atattctgattatcgaattgacagtttgaattatattttcaaaaataaag
tattctttttactaaactgggaaaaactctcactcaattgtctatcacta
actcatgcttcattcactactattcaaatgaggtatgaagtaggatttcg
tggtcttttcacctagctcaatttcatatgtctagttaccaaaatgtgtt
atgaaaattttgttctattatgatggattagatttgtttaaacttgtttt
attttattctcccatagaatcctgtcatcttctaatgagtgacattaagt
ggatctgatgaaaaaggaaggaaataggcatattaactatgatatatttg
ccagtagaactgacaattgttcacatcccaatagaaggaatggaaactgt
aattaggatgtattatgtgagaataacaagttattttcaataaataaaac
aatcaaaattaaaaaaaaaaaactccgtgttctcagagaatgatctttct
gtttggtgttgtgttcttttggtaggtgtttttgtcaagaattattccac
acatatccatcaaatgtattgtttttgaatgacctttttccctcttatta
aacattatgatgtttttatccattttttaataaagaaaagttctcctctt
gtatatgaatgtgttttcctactctctgcaaacaacttaggaatgtctta
aaaaataaaccagtttttttttatttgatttcatttagagaatgtgaaca
caaaagttcaattataactgaaaattacttgttgcttttgtctggttgct
gttattgctgtacttgaggtgtgttaatagcctttattttttctgttgtt
ctagtgctgtctataggttcctttgaccttctggtcatcttatgtaaaag
agtgagtgattcttcaaatttactaaagtgatgtttctattaatatgatt
tcctgtaattgtgttcattagtgatgtgtcgaggtgtccctttaattaac
cgcaaaacttttgatataaatgacaaagcccttaagccatatagactgtg
ggtttcataccgtaacattagccttcttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_9717732_9718912
seq2: B6Ng01-297E15.g_69_1247 (reverse)

seq1  GAAG-AGGCTAATGTTACAGTTATGAAACACCAACAGTCATAATTGCTAA  49
      |||| ||||||||||||| | ||||||  ||| ||||||   || ||| |
seq2  GAAGAAGGCTAATGTTAC-GGTATGAA--ACCCACAGTCTATATGGCTTA  47

seq1  CG---CTTGTCA-TTATATCCAAAAGTTTTTACCGTTTAATAAAAGGACA  95
       |    |||||| |||||| |||||| |||| | ||| | |||| |||||
seq2  AGGGCTTTGTCATTTATAT-CAAAAG-TTTTGCGGTTAATTAAAGGGACA  95

seq1  -CTCGACACATTCACTAATGAACACAATTACAGAAAATCATATTAATAGA  144
       ||||||||| |||||||||||||||||||||| ||||||||||||||||
seq2  CCTCGACACA-TCACTAATGAACACAATTACAGGAAATCATATTAATAGA  144

seq1  AACATCACTTTTTAGTAAATTTGAAGAATCCACTCACTCTTTTACATAAG  194
      ||||||||  ||||||||||||||||||| ||||||||||||||||||||
seq2  AACATCAC--TTTAGTAAATTTGAAGAAT-CACTCACTCTTTTACATAAG  191

seq1  ATGACCAGAAGGTCAAAGGAACCTATAGACAGCACTAGAACAACAGAAAA  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACCAGAAGGTCAAAGGAACCTATAGACAGCACTAGAACAACAGAAAA  241

seq1  AATAAAGGCTATTAACACACCTCAAGTACAGCAATAACAGCAACCAGACA  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAGGCTATTAACACACCTCAAGTACAGCAATAACAGCAACCAGACA  291

seq1  AAAGCAACAAGTAATTTTCAGTTATAATTGAACTTTTGTGTTCACATTCT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAACAAGTAATTTTCAGTTATAATTGAACTTTTGTGTTCACATTCT  341

seq1  CTAAATGAAATCAAAT-AAAAAAAACTGGTTTATTTTTTAAGACATTCCT  393
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CTAAATGAAATCAAATAAAAAAAAACTGGTTTATTTTTTAAGACATTCCT  391

seq1  AAGTTGTTTGCAGAGAGTAGGAAAACACATTCATATACAAGAGGAGAACT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGTTTGCAGAGAGTAGGAAAACACATTCATATACAAGAGGAGAACT  441

seq1  TTTCTTTATTAAAAAATGGATAAAAACATCATAATGTTTAATAAGAGGGA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTATTAAAAAATGGATAAAAACATCATAATGTTTAATAAGAGGGA  491

seq1  AAAAGGTCATTCAAAAACAATACATTTGATGGATATGTGTGGAATAATTC  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGTCATTCAAAAACAATACATTTGATGGATATGTGTGGAATAATTC  541

seq1  TTGACAAAAACACCTACCAAAAGAACACAACACCAAACAGAAAGATCATT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACAAAAACACCTACCAAAAGAACACAACACCAAACAGAAAGATCATT  591

seq1  CTCTGAGAACACGGAGTTTTTTTTTTTTAATTTTGATTGTTTTATTTATT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAGAACACGGAGTTTTTTTTTTTTAATTTTGATTGTTTTATTTATT  641

seq1  GAAAATAACTTGTTATTCTCACATAATACATCCTAATTACAGTTTCCATT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATAACTTGTTATTCTCACATAATACATCCTAATTACAGTTTCCATT  691

seq1  CCTTCTATTGGGATGTGAACAATTGTCAGTTCTACTGGCAAATATATCAT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTATTGGGATGTGAACAATTGTCAGTTCTACTGGCAAATATATCAT  741

seq1  AGTTAATATGCCTATTTCCTTCCTTTTTCATCAGATCCACTTAATGTCAC  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAATATGCCTATTTCCTTCCTTTTTCATCAGATCCACTTAATGTCAC  791

seq1  TCATTAGAAGATGACAGGATTCTATGGGAGAATAAAATAAAACAAGTTTA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTAGAAGATGACAGGATTCTATGGGAGAATAAAATAAAACAAGTTTA  841

seq1  AACAAATCTAATCCATCATAATAGAACAAAATTTTCATAACACATTTTGG  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAATCTAATCCATCATAATAGAACAAAATTTTCATAACACATTTTGG  891

seq1  TAACTAGACATATGAAATTGAGCTAGGTGAAAAGACCACGAAATCCTACT  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTAGACATATGAAATTGAGCTAGGTGAAAAGACCACGAAATCCTACT  941

seq1  TCATACCTCATTTGAATAGTAGTGAATGAAGCATGAGTTAGTGATAGACA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATACCTCATTTGAATAGTAGTGAATGAAGCATGAGTTAGTGATAGACA  991

seq1  ATTGAGTGAGAGTTTTTCCCAGTTTAGTAAAAAGAATACTTTATTTTTGA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGTGAGAGTTTTTCCCAGTTTAGTAAAAAGAATACTTTATTTTTGA  1041

seq1  AAATATAATTCAAACTGTCAATTCGATAATCAGAATATCTGGAACTACTG  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATAATTCAAACTGTCAATTCGATAATCAGAATATCTGGAACTACTG  1091

seq1  ATACAAATTATTTATTCCACATTTGCATGTGAACAAACATAAGAAGAAGC  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAAATTATTTATTCCACATTTGCATGTGAACAAACATAAGAAGAAGC  1141

seq1  ACCTATAAACTATTAATGTCAAACTGTAAAAGGAATTC  1181
      ||||||||||||||||||||||||||||||||||||||
seq2  ACCTATAAACTATTAATGTCAAACTGTAAAAGGAATTC  1179