BAC Information

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BAC

Clone NameB6Ng01-297F01
Chromosome7 (Build37)
Map Location 9,298,038 - 9,298,783
singlet/doubletsinglet
Overlap geneLOC665539
Upstream geneLOC100042695, LOC100041956, LOC100041961, LOC100042703, LOC100041967, LOC100042724, LOC100041977, LOC100041983, LOC100041989, LOC100041998, LOC100042009, LOC100042754, V2r14, EG628128, EG434109, LOC434110, EG628145, EG545909, LOC100042039, LOC100042781
Downstream geneLOC100042795, LOC100042060, EG665552, LOC100042790, LOC100042803, LOC665598, LOC100042810, LOC665593, EG665582, EG434113, EG665577, LOC665571, LOC100042083, Gm1961, V2r4, LOC100042848, LOC100042096, LOC100042870, LOC100042105, LOC100042859, LOC100042113, LOC100042120, LOC100042126, LOC100042139
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-297F01.bB6Ng01-297F01.g
ACCGA092702GA092703
length1,124752
definitionB6Ng01-297F01.b B6Ng01-297F01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacatgataaaagcaatctacagcaaacca
gtagccaatatcaaagtaaatggagagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctaccttttcaacatag
tacttgaagtattagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaagaggaagtcaaaatatcactttttccagatgatat
gatagtatatataagtgaccctaaaaattctaccagagaactcctaaacc
tgataaaccgcttcggtgaagtagctggatataaaataaactcaaaaaag
tcaatggcctttttctatacaaagaataaacaggctgagaaagaaattag
ggaaacaacacccttctcaatagtcacaaatagtataaaatatcttggcg
tgactctaactaaggaggtgaaagatctgtatgataaaaacttcaaatct
ctgaagaaagaaataaaagatctcagaagatggaaagatctcccatgctc
atggattggcaggaccaacattgtaaaaatggctatcttgccaaaagcaa
tctacagattcaacgcaatccccatcaaaattccaattcaattcttcaac
gaattagaaggagcaatttgcaaattcatctggaataacaaaaaacctag
gatagcaaaaattcttctcaaggataaaagaacctctggtggaatcacca
tgcctgacctaaagctatactacagagcaattgtgattaaaactgcatgg
tactggtttagaaacagacaagtagagcaatggaatagaatttgaagacc
cagaaatgaacccacacacctatggtcacttgatcttcgacaagggagct
taaaccatcccagtggaagaaagacagctttttcaacaattggtgctggc
acactgggtgttaccgtgtagaagaatgcgaatcgatccataactttatc
tccttgtactaaggtcaaatcctaagtgatcaggactttcacataaaacc
cgaagaacctgaaacctatgaggagaagttggggaaaaccttgaagattc
gggcacatgggaatattcttgaac
gaattcatagactagcaatgaaaatgggtggttttatacagagcatgtga
atatccatcagcataccccttccaatattgaatataaactatccttactc
attaattttctccatgattagaagatgagtttttatttatatttgtcagt
tatatggaaatcatttaaggagtggtctccagtgattctaccaagagtgt
aggctctggagatcattctgggttttctgagagtaactaaacaagaaata
gtgttggtattcagttctgtctgtagaaaagtgtttatatgtgtgaatgt
atgtttctcactgtgtatatatctattttctactctttctgtgtatctgt
gtttatacttgtgatactttcaacatacatgtttatctctatatgaaagt
ggaagtaagcgacaattttttctatgtaggaatttctttctataagtgtg
tttgtttatatatgtgcatatgtttctttgtggttttgtcagagtaggtt
tctttgtgtacattgtgtgtattttgtgagtgtttataagtacttatacg
gatttgtacctgatttgctgtgtatgagtctgcctatttcttcttacttg
gcatggacattgcctgcctttttgtatttaggtttgagtataaattttct
ctatgtgtcaatatcatttcatggctggtgcttatatatttatgcctctc
ccagttgttttttatgtcaaacgtgtgtgttgtgtctgtgtgtgtgtatg
tg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_9298038_9298783
seq2: B6Ng01-297F01.g_66_817

seq1  GAATTCATAGACTAGCAATGAAAATGGGTGGTTTTATACAGAGCATGTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAGACTAGCAATGAAAATGGGTGGTTTTATACAGAGCATGTGA  50

seq1  ATATCCATCAGCATACCCCTTCCAATATTGAATATAAACTATCCTTACTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCCATCAGCATACCCCTTCCAATATTGAATATAAACTATCCTTACTC  100

seq1  ATTAATTTTCTCCATGATTAGAAGATGAGTTTTTATTTATATTTGTCAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATTTTCTCCATGATTAGAAGATGAGTTTTTATTTATATTTGTCAGT  150

seq1  TATATGGAAATCATTTAAGGAGTGGTCTCCAGTGATTCTACCAAGAGTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGGAAATCATTTAAGGAGTGGTCTCCAGTGATTCTACCAAGAGTGT  200

seq1  AGGCTCTGGAGATCATTCTGGGTTTTCTGAGAGTAACTAAACAAGAAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTCTGGAGATCATTCTGGGTTTTCTGAGAGTAACTAAACAAGAAATA  250

seq1  GTGTTGGTATTCAGTTCTGTCTGTAGAAAAGTGTTTATATGTGTGAATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTGGTATTCAGTTCTGTCTGTAGAAAAGTGTTTATATGTGTGAATGT  300

seq1  ATGTTTCTCACTGTGTATATATCTATTTTCTACTCTTTCTGTGTATCTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTCTCACTGTGTATATATCTATTTTCTACTCTTTCTGTGTATCTGT  350

seq1  GTTTATACTTGTGATACTTTCAACATACATGTTTATCTCTATATGAAAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATACTTGTGATACTTTCAACATACATGTTTATCTCTATATGAAAGT  400

seq1  GGAAGTAAGCGACAATTTTTTCTATGTAGGAATTTCTTTCTATAAGTGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTAAGCGACAATTTTTTCTATGTAGGAATTTCTTTCTATAAGTGTG  450

seq1  TTTGTTTATATATGTGCATATGTTTCTTTGTGGTTTTGTCAGAGTAGGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTATATATGTGCATATGTTTCTTTGTGGTTTTGTCAGAGTAGGTT  500

seq1  TCTTTGTGTACATTGTGTGTATTTTGTGAGTGTTTATAAGTACTTATACG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGTGTACATTGTGTGTATTTTGTGAGTGTTTATAAGTACTTATACG  550

seq1  GATTTGTACCTGCTTTGCTGTGTATGAGTCTGCCTATTTCTTCTTACTTG  600
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GATTTGTACCTGATTTGCTGTGTATGAGTCTGCCTATTTCTTCTTACTTG  600

seq1  GCATGGACATTGCCTGCCTTTTTGTATTTAGGTTTGAGTATAAA-TTTCT  649
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GCATGGACATTGCCTGCCTTTTTGTATTTAGGTTTGAGTATAAATTTTCT  650

seq1  CTATGTGTCAATATCA-TTCATGGCTGGTGCTTATATATTTATGCCTCTC  698
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CTATGTGTCAATATCATTTCATGGCTGGTGCTTATATATTTATGCCTCTC  700

seq1  CCAGT--GTTTTTATGTC-AACGTGTGTG-TGTGTCTGTGTGTGTGTATG  744
      |||||   |||||||||| |||||||||| ||||||||||||||||||||
seq2  CCAGTTGTTTTTTATGTCAAACGTGTGTGTTGTGTCTGTGTGTGTGTATG  750

seq1  TG  746
      ||
seq2  TG  752