BAC Information

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BAC

Clone NameB6Ng01-297J02
Chromosome7 (Build37)
Map Location 89,624,825 - 89,625,970
singlet/doubletsinglet
Overlap geneAdamtsl3
Upstream geneAp3b2, BC048679, Fsd2, Whdc1, Homer2, 2610204K14Rik, 3110040N11Rik, Btbd1, Tm6sf1, LOC100043161, Hdgfrp3, Bnc1, Sh3gl3
Downstream gene1700129I04Rik, Eftud1, LOC100038986, LOC619808, Rkhd3, LOC619909, A530021J07Rik, EG666160
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-297J02.bB6Ng01-297J02.g
ACCGA092894GA092895
length1,2011,151
definitionB6Ng01-297J02.b B6Ng01-297J02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcctgtatttattataaaaaaagaaatcagtgaaatagagaata
ttaacagatttgcgagcagtgagtagagtaattcaaccaaatggcctgat
atagcctggaattcctttacctttattacctatggcatggcctatggtac
taattgttttaaaagacttgtcgtttttactacccccttgcaagtggatt
ataaggaaaattttgcctttcacagtgcctacatattataatgctataat
tatcaatctgtaaaatgtattggtggaaagttcttccagaaggaatgtta
aatagtccagctttatgtcaatattttgtgtaataaccactagaaataat
tcataagcaaatttatcaacccattattcatcattatatggaagatactt
tggctgattcagatgcagatactttagagaaaatgtttggtgaaacaaaa
agaattttgccctgttggagtttgcagattacttctgaaaaatacagaga
ggagattctatccactatctaggttataaaatatgtcaacaaaaacccaa
ccacagaaggtaaagatcaaaacagttgtgaaattttaatgattttcaaa
aattaatgggagataacaattggatacagcccatcgttggattaactact
caagagttaagtaatttgtttcaaacattacaaggagattcagacttaga
ctgtccaagataactaatgaataatgcagataaagagttaactttactag
aaaagtgactgcaagactcatatgtggatcacatagatcccaaactggac
tttattttggttattttgcctttgactcattctccactgggctcattata
caaagggaagaaagtattttagaatggatcttcttagcacacaaagtaaa
acattaaacacttatatagaaaaggtttcttatttaattataagaggaaa
aataggactatgttatttgtcagggatatactgaggagaaattgtagtgc
cgtatactaatattgagatgaaaagagctcgtggcactatttgggaaaaa
ttacagtaatatcttcttcaatttataaacatagctatgggattctccat
gcaattattaaaaggatgccagttcctgagacacttcatttatattcatg
ccaataagctgggaagttggcaaggccttataaagtccgagataaaatta
g
gaattctcagagtactaatgaaatgttttctctaagttaaatctttttct
ctagggaaattcatgtgtgtctataaagccccagatttgtcattctggct
ttctcttcttctccttttcttttgtttgtgtatggtatgtacgtgtgctt
gtacatgtatgtgcaggtacaaacacccacctggacatatgtatgctgag
gccaaaggaagactttagaagtcgtgacttgtcattatctacctcattcc
cttatgacagggtctctcactgtgtttggagcttgccattaggctggctg
accggcaagccccagagatctttctgtccacttgggatgctgctggttaa
taatcctgaaagtatctagtgttttggcctagtttctgtccaggaaggag
atgatccggagtgctcaggcagatcgtttgcaataaggtatgagtgacgt
ggtaaacactggcatttcatagctcccatgccaaggttaaggctatgtag
cctgcgtccataaaagcatggtgctttccgttcttcattctttctcttgg
tggccctatcctgtctgctgtggctctgaaactggccagctgaagccagt
ttggctgggagttccctcaaccatatggaaacacttccctataatcatac
tttgtgcgaaagaaatgtgggaactgaagccatggctcccctgagcgtgt
atcactgagccttacagggtccacgtcgctcctaagccagtgtcttgcca
agcaatcattcctgcgttcctcgggactctccttgagtcaagacatggtt
tatgagaggctattggcaccgccttgcactggataaagtagaaaggctgc
atacaggatatcagttctttgtgcagcgaggcagatacaaggtgtaagag
cctggagcccaaagccttagctatgagaaaaatcagaaatgaaatccaga
tacaacacaccaatttcctgttcagagtcaggcagagactgcactaaaca
accagcataaatagattgcatgttggaaaaagaggctggaggccactcaa
gtttccaaggaataaaactctgttgtctttagtataaaacaataatttat
ggtacatatttaaatagtggagccttggagagtgctcaacgtagaaagca
c
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_89624825_89625970
seq2: B6Ng01-297J02.g_65_1215

seq1  GAATTCTCAGAGTACTAATGAAATGTTTTCTCTAAGTTAAATCTTTTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGAGTACTAATGAAATGTTTTCTCTAAGTTAAATCTTTTTCT  50

seq1  CTAGGGAAATTCATGTGTGTCTATAAAGCCCCAGATTTGTCATTCTGGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGGAAATTCATGTGTGTCTATAAAGCCCCAGATTTGTCATTCTGGCT  100

seq1  TTCTCTTCTTCTCCTTTTCTTTTGTTTGTGTATGGTATGTACGTGTGCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTTCTTCTCCTTTTCTTTTGTTTGTGTATGGTATGTACGTGTGCTT  150

seq1  GTACATGTATGTGCAGGTACAAACACCCACCTGGACATATGTATGCTGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACATGTATGTGCAGGTACAAACACCCACCTGGACATATGTATGCTGAG  200

seq1  GCCAAAGGAAGACTTTAGAAGTCGTGACTTGTCATTATCTACCTCATTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAAGGAAGACTTTAGAAGTCGTGACTTGTCATTATCTACCTCATTCC  250

seq1  CTTATGACAGGGTCTCTCACTGTGTTTGGAGCTTGCCATTAGGCTGGCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATGACAGGGTCTCTCACTGTGTTTGGAGCTTGCCATTAGGCTGGCTG  300

seq1  ACCGGCAAGCCCCAGAGATCTTTCTGTCCACTTGGGATGCTGCTGGTTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGGCAAGCCCCAGAGATCTTTCTGTCCACTTGGGATGCTGCTGGTTAA  350

seq1  TAATCCTGAAAGTATCTAGTGTTTTGGCCTAGTTTCTGTCCAGGAAGGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCCTGAAAGTATCTAGTGTTTTGGCCTAGTTTCTGTCCAGGAAGGAG  400

seq1  ATGATCCGGAGTGCTCAGGCAGATCGTTTGCAATAAGGTATGAGTGACGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATCCGGAGTGCTCAGGCAGATCGTTTGCAATAAGGTATGAGTGACGT  450

seq1  GGTAAACACTGGCATTTCATAGCTCCCATGCCAAGGTTAAGGCTATGTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAACACTGGCATTTCATAGCTCCCATGCCAAGGTTAAGGCTATGTAG  500

seq1  CCTGCGTCCATAAAAGCATGGTGCTTTCCGTTCTTCATTCTTTCTCTTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCGTCCATAAAAGCATGGTGCTTTCCGTTCTTCATTCTTTCTCTTGG  550

seq1  TGGCCCTATCCTGTCTGCTGTGGCTCTGAAACTGGCCAGCTGAAGCCAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCCTATCCTGTCTGCTGTGGCTCTGAAACTGGCCAGCTGAAGCCAGT  600

seq1  TTGGCTGGGAGTTCCCTCAACCATATGGAAACACTTCCCTATAATCATAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTGGGAGTTCCCTCAACCATATGGAAACACTTCCCTATAATCATAC  650

seq1  TTTGTGCGAAAGAAATGTGGGAACTGAAGCCATGGCTCCCCTGAGCGTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGCGAAAGAAATGTGGGAACTGAAGCCATGGCTCCCCTGAGCGTGT  700

seq1  ATCACTGAGCCTTACAGGGTCCACGTCGCTCCTAAGCCAGTGTCTTGCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTGAGCCTTACAGGGTCCACGTCGCTCCTAAGCCAGTGTCTTGCCA  750

seq1  AGCAATCATTCCTGCGTTCCTCGGGACTCTCCTTGAGTCAAGACATGG-T  799
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  AGCAATCATTCCTGCGTTCCTCGGGACTCTCCTTGAGTCAAGACATGGTT  800

seq1  TATGAGAGGCTATTGGCACCGCCTTGCACTGGATAAAGTAG-AAGGCTGC  848
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TATGAGAGGCTATTGGCACCGCCTTGCACTGGATAAAGTAGAAAGGCTGC  850

seq1  ATACAGGATATCAGTTCTTTGTGCAGCGAGGCAGATACAAGGTGTAAGAG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGGATATCAGTTCTTTGTGCAGCGAGGCAGATACAAGGTGTAAGAG  900

seq1  CCTGGAG-CCAAAGCCTTAGCTATGAGAAAAATCAGAAATG-AATCCAGA  946
      ||||||| ||||||||||||||||||||||||||||||||| ||||||||
seq2  CCTGGAGCCCAAAGCCTTAGCTATGAGAAAAATCAGAAATGAAATCCAGA  950

seq1  TACAACACACCAATTTCCTGTTCAGAGTCAGGCAGAGACTGCACT-AACA  995
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TACAACACACCAATTTCCTGTTCAGAGTCAGGCAGAGACTGCACTAAACA  1000

seq1  ACCAGCATAAATAGATTTGCATGTTGG-AAAAGAAGCTGGAAGCCACTCA  1044
      ||||||||||||||| ||||||||||| |||||| |||||| ||||||||
seq2  ACCAGCATAAATAGA-TTGCATGTTGGAAAAAGAGGCTGGAGGCCACTCA  1049

seq1  AG-TTCCAAGGGATAAAACTCTGGTGGTCTTTAGTATAAAACAATAA-TT  1092
      || |||||||| |||||||||| || ||||||||||||||||||||| ||
seq2  AGTTTCCAAGGAATAAAACTCT-GTTGTCTTTAGTATAAAACAATAATTT  1098

seq1  AT-GTACAATATTTTAAATAGT-GAG-CTTGGAGAGTTGCTCAACGGTTA  1139
      || |||| ||| |||||||||| ||| ||||||||| |||||||||  ||
seq2  ATGGTAC-ATA-TTTAAATAGTGGAGCCTTGGAGAG-TGCTCAACG--TA  1143

seq1  G-AAGCAC  1146
      | ||||||
seq2  GAAAGCAC  1151