BAC Information

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BAC

Clone NameB6Ng01-298B04
Chromosome7 (Build37)X (Build37)
Map Location 69,027,205 - 69,027,86462,230,810 - 62,231,142
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100041229, LOC625287, D0Kist2, LOC100041248, LOC100041259, EG664943, B230209E15Rik, EG620934
Downstream geneLOC100041293, Ndn, Magel2, Mkrn3, Peg12, Atp5l-ps1, EG665038, LOC669222, LOC384631, LOC622243, EG622251
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-298B04.bB6Ng01-298B04.g
ACCGA093277GA093278
length662995
definitionB6Ng01-298B04.b B6Ng01-298B04.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(69,027,205 - 69,027,864)(62,230,810 - 62,231,142)
sequence
gaattctcttctataaaaactaggtttcactagaagtgcattccttatac
aatttaaatcaattttgtcctaatgttatttttacatgtattaggtgatg
aaataatatagtaaatactgtacttagtgtagcctttcataaataaaaaa
attcatctacacatatgtgaaaaattcgtatatgtgaatataaaataaaa
acctgttaaaatataaagatagcaaatcattcattcaactcacactaaat
aaattagtacttgaatttctatggatgtgataattgaaatggtacctcaa
acaacaaagttattaaaggaatacatgccagctttctgtatctatggtta
cagttcagtagagcatgaagaataaggtctgcaatcctataggagaaaca
acaatatgaactaaccagtaccccccagagctgtgtctctagttgcatat
gtagcagagggtggcctagtcagccatcaatgggaggaaaggcccttggt
cttgtgaagatcttatgccccagtactgggggatgcccttgccaagaaac
aggagtgggtgggttggggagcagggaggggtagggtatagggagctttg
gggatagcatttgaaatgtatttgaagaaaatatctaataaaaaataaaa
aaagtaaagtca

gaattctttgtttagctctgttccccatagcattttccttcttccttttt
attagaaatttccttgatttacatttcaaatgctgtccctaaagttccct
ataccctctccccatcctgctcccctacctacctattcccacttcttggc
cctgacgttcccctgtactgaggcatataaagttttcaagaccaaggggc
tctcttcccaatgatggccaactaggccatcttctgctacatatgcagct
agagaaacaagctctgggggtactggttagttcatattgttgttccacct
atagggttgcagacccttcaactccttgggtactttctctagctcctcca
ttgggggccctgtgttccatcctatagatgactgtgagcatccacttctg
tatttgccaggcactggcgtagcctcactcgaggcagctatctcagagtc
atttttaaaggatagaacccaaaagcaaagtggagtagggaggcacattg
aagttttccaggtgtaagaagagtgacttcaaaaggaaccagataaatgt
ttacactagagattagcacagatgcaagaggagtgacttcaaaggaaatt
tgcaagaatcagataaatgtttacactagaaattagcatcccctccttgg
atcagctttgtgccaggcaagagctttacactttagtgttaatagcacca
gggggttattaactcttgacaggcttcaagaataatgtagtgtcactgac
cccgaaattctctaggccttgttaaattttatcttgtctggagaaccctc
attattaggatagtatattaactcactcttgcctttctttttaatactca
cttctctgtgggggataaagctgcaactgtgtcagtacagattacaaggc
tattgcattattcactaccctcctgggtaattgataaaacatttggtgta
atgatgtgacattttcccacacatcatttaaattttgtatgagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_69027205_69027864
seq2: B6Ng01-298B04.b_45_706

seq1  GAATTCTCTTCTATAAAAACTAGGTTTCACTAGAAGTGCATTCCTTATAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTCTATAAAAACTAGGTTTCACTAGAAGTGCATTCCTTATAC  50

seq1  AATTTAAATCAATTTTGTCCTAATGTTATTTTTACATGTATTAGGTGATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAAATCAATTTTGTCCTAATGTTATTTTTACATGTATTAGGTGATG  100

seq1  AAATAATATAGTAAATACTGTACTTAGTGTAGCCTTTCATAAATAAAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATATAGTAAATACTGTACTTAGTGTAGCCTTTCATAAATAAAAAA  150

seq1  ATTCATCTACACATATGTGAAAAATTCGTATATGTGAATATAAAATAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATCTACACATATGTGAAAAATTCGTATATGTGAATATAAAATAAAA  200

seq1  ACCTGTTAAAATATAAAGATAGCAAATCATTCATTCAACTCACACTAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTTAAAATATAAAGATAGCAAATCATTCATTCAACTCACACTAAAT  250

seq1  AAATTAGTACTTGAATTTCTATGGATGTGATAATTGAAATGGTACCTCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAGTACTTGAATTTCTATGGATGTGATAATTGAAATGGTACCTCAA  300

seq1  ACAACAAAGTTATTAAAGGAATACATGCCAGCTTTCTGTATCTATGGTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACAAAGTTATTAAAGGAATACATGCCAGCTTTCTGTATCTATGGTTA  350

seq1  CAGTTCAGTAGAGCATGAAGAATAAGGTCTGCAATCCTATAGGAGAAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCAGTAGAGCATGAAGAATAAGGTCTGCAATCCTATAGGAGAAACA  400

seq1  ACAATATGAACTAACCAGTACCCCCCAGAGCTGTGTCTCTAGTTGCATAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATATGAACTAACCAGTACCCCCCAGAGCTGTGTCTCTAGTTGCATAT  450

seq1  GTAGCAGAGGGTGGCCTAGTCAGCCATCAATGGGAGGAAAGGCCCTTGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCAGAGGGTGGCCTAGTCAGCCATCAATGGGAGGAAAGGCCCTTGGT  500

seq1  CTTGTGAAGATCTTATGCCCCAGTACTGGGGGATGCCCTTGCCAAGAAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTGAAGATCTTATGCCCCAGTACTGGGGGATGCCCTTGCCAAGAAAC  550

seq1  AGGAGTGGGTGGGTTGGGGAGCAGGGAGGGGTAGGGTATAGGGAGCTTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTGGGTGGGTTGGGGAGCAGGGAGGGGTAGGGTATAGGGAGCTTTG  600

seq1  GGGATAGCATTTGAAATGTAAATGAAGAAAATATCTAATAAAAAAT-AAA  649
      ||||||||||||||||||||  |||||||||||||||||||||||| |||
seq2  GGGATAGCATTTGAAATGTATTTGAAGAAAATATCTAATAAAAAATAAAA  650

seq1  AAAGT-AAGTCA  660
      ||||| ||||||
seq2  AAAGTAAAGTCA  662


seq1: chrX_62230810_62231142
seq2: B6Ng01-298B04.g_134_468

seq1  ATTTACATTTCCAATGCTATCCCAAAAGTCCCCCATACCCTCCTCCCCA-  49
      ||||||||||| |||||| |||| ||||| ||| ||||||| ||||||| 
seq2  ATTTACATTTCAAATGCTGTCCCTAAAGTTCCCTATACCCT-CTCCCCAT  49

seq1  ----CTCACCTACCCACCCACTCCCACTTCTTGGCCCTGGCGTTCCCCTG  95
          ||| |||||| ||| | |||||||||||||||||| ||||||||||
seq2  CCTGCTCCCCTACCTACCTATTCCCACTTCTTGGCCCTGACGTTCCCCTG  99

seq1  TACTGAGGCATATAAAGTTTGCAAGACCAATGGGCCTCTCTTTCCAATGA  145
      |||||||||||||||||||| ||||||||| ||| ||||||| |||||||
seq2  TACTGAGGCATATAAAGTTTTCAAGACCAA-GGGGCTCTCTTCCCAATGA  148

seq1  TGGCTGAATAGGCCATCTTCTGATACATATGCAGCTAGAGACACGAGCTC  195
      ||||  | |||||||||||||| |||||||||||||||||| || |||||
seq2  TGGCCAACTAGGCCATCTTCTGCTACATATGCAGCTAGAGAAACAAGCTC  198

seq1  TGGGGGGTACTGGTTTGTTCATATTGTTGTTCCACCTATAGGGTTGTAGA  245
      | ||||||||||||| |||||||||||||||||||||||||||||| |||
seq2  T-GGGGGTACTGGTTAGTTCATATTGTTGTTCCACCTATAGGGTTGCAGA  247

seq1  CCCCTTTAGCTCCTTGAGTACTTTCTCTAGCTCCTCCATT-GGGGCCCTG  294
       ||||| | ||||||| ||||||||||||||||||||||| |||||||||
seq2  -CCCTTCAACTCCTTGGGTACTTTCTCTAGCTCCTCCATTGGGGGCCCTG  296

seq1  TGATCCATCCAAGAGCTGACTGTGAGCATCCACTTCTGT  333
      || ||||||| | || |||||||||||||||||||||||
seq2  TGTTCCATCCTATAGATGACTGTGAGCATCCACTTCTGT  335


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