BAC Information

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BAC

Clone NameB6Ng01-298F13
Chromosome7 (Build37)
Map Location 21,838,036 - 21,839,162
singlet/doubletsinglet
Overlap geneEG435953
Upstream geneEG545926, LOC100043528, LOC100042964, LOC100042966, LOC100043533, EG435949, LOC100043536, LOC100042968, LOC100042971, EG667129, EG667135, EG435946, LOC100042976, LOC100043550, LOC667156, LOC673977, LOC667166, LOC100042980, EG381936, LOC100043559, LOC667311, LOC100043561, LOC667302, EG667292, LOC100043566, LOC100043569, EG436135, LOC100042996, EG667273, EG667268, EG667262, EG667259, LOC100043574, LOC100043576, Gm1447, LOC100043006, LOC100043583
Downstream geneLOC673902, EG667240, EG435951, Gm1446, LOC381937, LOC100043588, LOC670764, EG667215, LOC100043013, LOC621561, EG667199, EG621510, LOC667186, EG628475, LOC100043595, LOC100043596, LOC667358, LOC100043016, LOC100043602, LOC100043604, EG667378, LOC100043607, LOC100043019, LOC100043025, EG667404, EG435940, LOC100043026, EG545929, LOC667421, LOC100043614, LOC667431, LOC100043029, EG620736
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-298F13.bB6Ng01-298F13.g
ACCGA093478GA093479
length1,127780
definitionB6Ng01-298F13.b B6Ng01-298F13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgatggtagaatcacatgttcaaactactctctttcttgtttgt
attcataagcaaggaccattgtgtgttaaaatgtgtgttattgtattctt
gagctactggaccaataaatctgtagttgtaatacaaaaattatctcaag
gccggagtaataaaatcagtataaaatttaatttgagttattatatatgc
atgttttccaggcaatttacctgtagtgtgatagaatagtgtctcactta
tcaagtgaagaaattgtctcaaatcaattggtaaatgtggacaataaaac
agaaacctgagaagagtagtgttctatctaatcatccagggtcctgtaaa
accctctcaatgtctgatcatgctaaatccctgaaaagcactgaggaagt
ggctcttcagctcctcttgctttgccagtttggggttgggaccttggcca
atgtctttctgtttgtccataatttctatccagtcttgactggttctaaa
cagagacccagaaaggtgattttaagccacatggctgtggccaatgcctt
gactatattcctcactatatttccaaacaacatgatagcttttgctccaa
aaactcctccaactgaactcaaatgtaaattagaattcttcagtcacatg
gtggcaagaaacacaaacttgtgttccacctgtgtcctgagtatccatca
ttttgtcactcttgttcttgttaatagaggtaaacttatactcagagcta
gtgtcccaaattttgtgagttattcttgttacagttgttggtttttcagt
gtcttaagtaacatccacattccaattaaggtcactggtccacagataac
agacaataacactgactctaaaagcaacttgttctgttccacttctggat
tcattggaggcattgtcttcttgcagttttcctatgatgccacattcatg
agcatcatggtctggaaccagtgtctccatgatacttctcctcatagaca
tcgccagcgaatgcagcacatcctcactcccaatcagtaccgcagaaggc
aagctgagtccagagcaaccatactattctgatgctggtggtcaccattt
gttagccttttaatcttctaatttatt
gaattcatcactttcatttatttatttatttatttatttatttatttatt
tatttatttatttatattagatattttctttatttacatttcaaatgtta
tcccttttcctagtttctcccctgaaaatcccctatcctttaccccctcc
ttgtgctcaccaatccaccctcttctgattcctggcctaggcattttcct
atactggggcgtagaactttcatagtcaaagggcctcgcctcccattgat
gaccaactaggccatccactgctacttatgcagctagagccacaattccc
ataatgcattttcttttattagtggtttagtcccagggagctctggggtt
actggttatttcatattgttgttcctcctatggggctgcaaacccctgca
gctgaaagggtactttctctagcttcttcaacgggggctttgtgctctat
ctaatggatgactgtgagcatccacttctatatcagtcaggtactggcag
agcctctcagtagacagttataccagtctcctgtcagcaagctcttgttg
gcatctgcaatagtatctgggtttggtggtggtttatgggatggatcctc
aggtgaggcagttttctggatggtcactccttcagtctctgctccacact
ttgtctctggtaactccttccatgggtattttgttcaccctttctaagaa
ggattgatggtgtccacattttgtctcctatttcttgagttttcatgtgt
ttttgcaaattgtatcttggggtatttctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_21838036_21839162
seq2: B6Ng01-298F13.b_45_1171 (reverse)

seq1  AATAAAATTTAGAAGAT--AAAAGCTAACAAAT-GTGACCACCAGCATCA  47
      ||||||  |||||||||  ||| |||||||||| ||||||||||||||||
seq2  AATAAA--TTAGAAGATTAAAAGGCTAACAAATGGTGACCACCAGCATCA  48

seq1  GAATAGTATGGGTTGCTCTGGACTCAGCTTGGCCTCTGCGGTACTGATTG  97
      ||||||||| ||||||||||||||||||||| | ||||||||||||||||
seq2  GAATAGTAT-GGTTGCTCTGGACTCAGCTTGCCTTCTGCGGTACTGATTG  97

seq1  GGAGTGAGGATGTGCTGCATTCGCTGGCGATGTCTATGGAGGAGAAGTAT  147
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GGAGTGAGGATGTGCTGCATTCGCTGGCGATGTCTAT-GAGGAGAAGTAT  146

seq1  CATGGAGACACTGG-TCCAGACCATGATGCTCATGAATGTGGCATCATAG  196
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CATGGAGACACTGGTTCCAGACCATGATGCTCATGAATGTGGCATCATAG  196

seq1  GAAAACTGCAAGAAGACAATGCCTCCAATGAATCCAGAAGTGGAACAGAA  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACTGCAAGAAGACAATGCCTCCAATGAATCCAGAAGTGGAACAGAA  246

seq1  CAAGTTGCTTTTAGAGTCAGTGTTATTGTCTGTTATCTGTGGACCAGTGA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTGCTTTTAGAGTCAGTGTTATTGTCTGTTATCTGTGGACCAGTGA  296

seq1  CCTTAATTGGAATGTGGATGTTACTTAAGACACTGAAAAACCAACAACTG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAATTGGAATGTGGATGTTACTTAAGACACTGAAAAACCAACAACTG  346

seq1  TAACAAGAATAACTCACAAAATTTGGGACACTAGCTCTGAGTATAAGTTT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAAGAATAACTCACAAAATTTGGGACACTAGCTCTGAGTATAAGTTT  396

seq1  ACCTCTATTAACAAGAACAAGAGTGACAAAATGATGGATACTCAGGACAC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCTATTAACAAGAACAAGAGTGACAAAATGATGGATACTCAGGACAC  446

seq1  AGGTGGAACACAAGTTTGTGTTTCTTGCCACCATGTGACTGAAGAATTCT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGAACACAAGTTTGTGTTTCTTGCCACCATGTGACTGAAGAATTCT  496

seq1  AATTTACATTTGAGTTCAGTTGGAGGAGTTTTTGGAGCAAAAGCTATCAT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTACATTTGAGTTCAGTTGGAGGAGTTTTTGGAGCAAAAGCTATCAT  546

seq1  GTTGTTTGGAAATATAGTGAGGAATATAGTCAAGGCATTGGCCACAGCCA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTTGGAAATATAGTGAGGAATATAGTCAAGGCATTGGCCACAGCCA  596

seq1  TGTGGCTTAAAATCACCTTTCTGGGTCTCTGTTTAGAACCAGTCAAGACT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCTTAAAATCACCTTTCTGGGTCTCTGTTTAGAACCAGTCAAGACT  646

seq1  GGATAGAAATTATGGACAAACAGAAAGACATTGGCCAAGGTCCCAACCCC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAGAAATTATGGACAAACAGAAAGACATTGGCCAAGGTCCCAACCCC  696

seq1  AAACTGGCAAAGCAAGAGGAGCTGAAGAGCCACTTCCTCAGTGCTTTTCA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGGCAAAGCAAGAGGAGCTGAAGAGCCACTTCCTCAGTGCTTTTCA  746

seq1  GGGATTTAGCATGATCAGACATTGAGAGGGTTTTACAGGACCCTGGATGA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATTTAGCATGATCAGACATTGAGAGGGTTTTACAGGACCCTGGATGA  796

seq1  TTAGATAGAACACTACTCTTCTCAGGTTTCTGTTTTATTGTCCACATTTA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATAGAACACTACTCTTCTCAGGTTTCTGTTTTATTGTCCACATTTA  846

seq1  CCAATTGATTTGAGACAATTTCTTCACTTGATAAGTGAGACACTATTCTA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATTGATTTGAGACAATTTCTTCACTTGATAAGTGAGACACTATTCTA  896

seq1  TCACACTACAGGTAAATTGCCTGGAAAACATGCATATATAATAACTCAAA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACTACAGGTAAATTGCCTGGAAAACATGCATATATAATAACTCAAA  946

seq1  TTAAATTTTATACTGATTTTATTACTCCGGCCTTGAGATAATTTTTGTAT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATTTTATACTGATTTTATTACTCCGGCCTTGAGATAATTTTTGTAT  996

seq1  TACAACTACAGATTTATTGGTCCAGTAGCTCAAGAATACAATAACACACA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAACTACAGATTTATTGGTCCAGTAGCTCAAGAATACAATAACACACA  1046

seq1  TTTTAACACACAATGGTCCTTGCTTATGAATACAAACAAGAAAGAGAGTA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAACACACAATGGTCCTTGCTTATGAATACAAACAAGAAAGAGAGTA  1096

seq1  GTTTGAACATGTGATTCTACCATCAGAATTC  1127
      |||||||||||||||||||||||||||||||
seq2  GTTTGAACATGTGATTCTACCATCAGAATTC  1127