BAC Information

Click to search

BAC

Clone NameB6Ng01-298G16
Chromosome7 (Build37)
Map Location 110,716,210 - 110,819,308
singlet/doubletdoublet
Overlap geneLOC100042167, Olfr617, Olfr618, Olfr619, Olfr620, LOC667639, Olfr622, Olfr623, Olfr624
Upstream geneLOC384699, Olfr550, Olfr551, Olfr552, Olfr553, Olfr554, LOC100040840, Olfr555, Olfr556, Trim68, Olfr557, Olfr558, Olfr33, Olfr559, Olfr78, Olfr560, Olfr561, Olfr562-ps1, Olfr563-ps1, Olfr564, Olfr565-ps1, Olfr566, GA_x5J8B7W5P47-379997-380552, Olfr567-ps1, Olfr568, Olfr569, Olfr570, Olfr571, Olfr572, Olfr573-ps1, Olfr574, Olfr575, Olfr576, Olfr577, Olfr578, Olfr1527-ps1, Olfr579-ps1, Olfr580-ps1, Olfr581-ps1, Olfr582, Olfr583, Olfr584, Olfr585, Olfr586, Olfr587-ps1, Olfr588-ps1, Olfr589, Olfr590-ps1, Olfr591, Olfr592, Olfr593, Olfr594, Olfr595-ps1, Usp17, Dub2a, LOC100041187, Olfr597, GA_x5J8B7TU1BB-380-666, Olfr598, Olfr599, Olfr600, Olfr601, Olfr602-ps1, Olfr604, Olfr596-ps1, Dub2, Olfr605, Olfr606, EG546989, Olfr608, Olfr609, Olfr610, Olfr611, EG545985, Olfr614, Olfr615, Olfr616
Downstream geneOlfr625-ps1, Olfr261-ps1, Olfr260-ps1, Olfr627, Olfr1526-ps1, Olfr629, Olfr630, Olfr69, Olfr68, Olfr67, Hbb-b1, EG436003, Hbb-bh1, Hbb-y, Olfr66, Olfr64, Olfr65, Olfr631, Olfr632, Olfr633, Olfr634-ps1, LOC233614, Olfr635, Olfr636-ps1, Olfr637-ps1, Olfr638, Olfr639, Olfr640, Olfr641, Olfr642, Olfr643, Olfr644, Olfr645, Olfr646, 4931431F19Rik, Ubqln3, Ubqlnl, E030002O03Rik, Olfr647-ps1, Olfr648, Olfr649, Olfr650-ps1, Trim6, LOC667497, EG667823, Trim12, Trim34, 9230105E10Rik, A530023O14Rik, EG434219, LOC100041595, Trim30, AI451617, LOC672495, LOC625305, EG625321, Olfr651, Olfr652, Olfr653, Olfr654, Olfr655, Olfr656, Olfr657, Olfr658, LOC667882, Olfr659
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-298G16.bB6Ng01-298G16.g
ACCGA093528GA093529
length1,1321,141
definitionB6Ng01-298G16.b B6Ng01-298G16.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(110,716,210 - 110,717,351)(110,818,164 - 110,819,308)
sequence
gaattcactgcaggtatttccctttcttttctgtgcttagggctcagaac
ataacatagatattaagatcaccatccacacctttgcaagttttactgta
aaactcactttatactcactctgttacatagcctagttcatttttgctat
tgttttcagacatgttaccagcccctttccatgaagatatgttttttcca
actgatttcatttagttttagttattttgctatctattcacactggatgg
ttcaacacactagatatagcttaatccctcttaaattagattgccatctt
ttgatcatatactcacaaactgtggtttaggaattctgatagtaattaaa
ttaactggttaatgtttagtttctatgaagccttttactggaatatccct
ggctatttcagatcttgagaattattctagccattaaatttctatcaagt
gttcactgttgctcctataattaacattcagcacgtttgatttaatgttc
tcttcttcgtgttacccagatagatttttcttacttgatgttcagtgtca
ttaatgttgggatcataagctctccatagtattgacatcattcatttatt
cctatcatacaagctgcataatgaaagttgcttaaataaataaattgaaa
gtttatacattcttattgtaccatatgaatattaacatctgatagagaca
taaaattcaccagtaactcaaaatccattttaagttctaatgtataaaat
attttgaggaattatacattgggtggggagaggggcatttaaaactaaag
attaagttctagtaaactaaagaaaaaggttattgttatctgaaaggtag
cattttagaacttacagcttactcagtttccagcttccagttatgtgtgt
cctgttgtccatgctactttatggtagattttccatactagccaaaacat
tgctttgtttctacttgaagatttagaagtcacttcattctttcaacttc
caccactatgactgactctagccctcctcaaattctttgtacatctactc
ctccagttctcttaagagaaccttacttcggcatttttctcctgtctttc
ccaatgttggaactttaattctacaaggtttt
gaattctttggggatttcttcaagagatcagccttgatgcctgcattgca
cagtcttacttcatccatggtttgtccttcatggagtcctctgtcctcct
cgccatgtcctttgatcgctacattgccatttgcaaccctctacgctatt
cctccatcctaaccaatgacagaatcctgaaaatcggagtggccatctta
tgtaggagttctatgctcattcctccagttattatccgcctgaagttctt
aaattactgcaggcctcatttcctctcccactctttctgcctgcaccaag
acttgattcgaatggcttgttcagatatccgctttaacagtttctatgct
ctgtctctggtgatttgcaccctgttactggatgcagtgctcattcttgc
ctcctacgtgatgatcctgcacacagttctatcgattgcatccagggagg
agagaatcaagtctttgcaaacatgtgtatctcacatctctgctgttttg
gttttctacatccccattattggtctgactatggttcaccgctttgggaa
gcatctctctcctctggttcaggtcctcatgggcaacatttatatccttt
tcccacccttgatgaaccccattatatacagtatcaagactcagcagatc
cgagtgagaattcagagactgttttccttgaatggaatctaagtcctcag
gtccatagtgattgtatttaaaagtaaagaagtgcactctcagaagagga
ctgcaaagaactgaaacttaactatttaactcatctttcattgacaaatt
acattttacaaatactctcttctactttttaccacagccatcatgaataa
ttgatattgactcatataaaattcatatatatatatatatatgcttattt
gtgtataatgtgctgacaagtatgagtggatgagttcaatactgaaaatc
tttccatatatggtcaatggatataggatacatttattttctcctttagg
agaaaggtaatttttatggatatattctttaatgaatactgaattatatt
tttttggattcttctaactctagtcaccatatgagtttatacacataatc
ctctgattccgtggctaatccaaatggccatataatatgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_110716210_110717351
seq2: B6Ng01-298G16.b_46_1177

seq1  GAATTCACTGCAGGTATTTCCCTTTCTTTTCTGTGCTTAGGGCTCAGAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGCAGGTATTTCCCTTTCTTTTCTGTGCTTAGGGCTCAGAAC  50

seq1  ATAACATAGATATTAAGATCACCATCCACACCTTTGCAAGTTTTACTGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACATAGATATTAAGATCACCATCCACACCTTTGCAAGTTTTACTGTA  100

seq1  AAACTCACTTTATACTCACTCTGTTACATAGCCTAGTTCATTTTTGCTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCACTTTATACTCACTCTGTTACATAGCCTAGTTCATTTTTGCTAT  150

seq1  TGTTTTCAGACATGTTACCAGCCCCTTTCCATGAAGATATGTTTTTTCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTCAGACATGTTACCAGCCCCTTTCCATGAAGATATGTTTTTTCCA  200

seq1  ACTGATTTCATTTAGTTTTAGTTATTTTGCTATCTATTCACACTGGATGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATTTCATTTAGTTTTAGTTATTTTGCTATCTATTCACACTGGATGG  250

seq1  TTCAACACACTAGATATAGCTTAATCCCTCTTAAATTAGATTGCCATCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACACACTAGATATAGCTTAATCCCTCTTAAATTAGATTGCCATCTT  300

seq1  TTGATCATATACTCACAAACTGTGGTTTAGGAATTCTGATAGTAATTAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATCATATACTCACAAACTGTGGTTTAGGAATTCTGATAGTAATTAAA  350

seq1  TTAACTGGTTAATGTTTAGTTTCTATGAAGCCTTTTACTGGAATATCCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTGGTTAATGTTTAGTTTCTATGAAGCCTTTTACTGGAATATCCCT  400

seq1  GGCTATTTCAGATCTTGAGAATTATTCTAGCCATTAAATTTCTATCAAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTATTTCAGATCTTGAGAATTATTCTAGCCATTAAATTTCTATCAAGT  450

seq1  GTTCACTGTTGCTCCTATAATTAACATTCAGCACGTTTGATTTAATGTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCACTGTTGCTCCTATAATTAACATTCAGCACGTTTGATTTAATGTTC  500

seq1  TCTTCTTCGTGTTACCCAGATAGATTTTTCTTACTTGATGTTCAGTGTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTCGTGTTACCCAGATAGATTTTTCTTACTTGATGTTCAGTGTCA  550

seq1  TTAATGTTGGGATCATAAGCTCTCCATAGTATTGACATCATTCATTTATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGTTGGGATCATAAGCTCTCCATAGTATTGACATCATTCATTTATT  600

seq1  CCTATCATACAAGCTGCATAATGAAAGTTGCTTAAATAAATAAATTGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATCATACAAGCTGCATAATGAAAGTTGCTTAAATAAATAAATTGAAA  650

seq1  GTTTATACATTCTTATTGTACCATATGAATATTAACATCTGATAGAGACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATACATTCTTATTGTACCATATGAATATTAACATCTGATAGAGACA  700

seq1  TAAAATTCACCAGTAACTCAAAATCCATTTTAAGTTCTAATGTATAAAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTCACCAGTAACTCAAAATCCATTTTAAGTTCTAATGTATAAAAT  750

seq1  ATTTTGAGGAATTATACATTGGGTGGGGAGAGGGGCATTTAAAACTAAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGAGGAATTATACATTGGGTGGGGAGAGGGGCATTTAAAACTAAAG  800

seq1  ATTAAGTTCTAGTAAACTAAAGAAAAAGGTTATTGTTATCTGAAAGGTAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGTTCTAGTAAACTAAAGAAAAAGGTTATTGTTATCTGAAAGGTAG  850

seq1  CATTTTAGAACTTACAGCTTACTCAGTTTCCAGCTTCCAGTTATGTGTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTAGAACTTACAGCTTACTCAGTTTCCAGCTTCCAGTTATGTGTGT  900

seq1  CCTGTTGTCCATGCTACTTTATGGTAGATTTTCCATACTAGCCAAAACAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTGTCCATGCTACTTTATGGTAGATTTTCCATACTAGCCAAAACAT  950

seq1  TGCTTTGTTTCTACTTGAAGATTTAGAAGTCACTTCATTCTTTCAACTTC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTGTTTCTACTTGAAGATTTAGAAGTCACTTCATTCTTTCAACTTC  1000

seq1  CACCCACTATGACTGACTTCTAGCCCTCCTCAAATTCTTTTGTAACATCT  1050
      || |||||||||||||| ||||||||||||||||||| ||||| ||||||
seq2  CA-CCACTATGACTGAC-TCTAGCCCTCCTCAAATTC-TTTGT-ACATCT  1046

seq1  ACTCCTCCCAGTTCTCCTTTAAGAGAA-CTTACTTCGCCATTTTTCTTCC  1099
      |||||| |||||||||  ||||||||| ||||||||| |||||||||  |
seq2  ACTCCT-CCAGTTCTC--TTAAGAGAACCTTACTTCGGCATTTTTCT--C  1091

seq1  CTGTCTTTCCCATTGTTTGAACTTTTAATTCCTACAATGTTTT  1142
      |||||||||||| |||| |||| ||||||| |||||| |||||
seq2  CTGTCTTTCCCAATGTTGGAAC-TTTAATT-CTACAAGGTTTT  1132

seq1: chr7_110818164_110819308
seq2: B6Ng01-298G16.g_66_1206 (reverse)

seq1  CACATATTATAATGCCATTTGGATAAGCCAC-GAATCAGA-GATAATGTG  48
      |||||||||||  ||||||||||| |||||| |||||||| ||| |||||
seq2  CACATATTATATGGCCATTTGGATTAGCCACGGAATCAGAGGATTATGTG  50

seq1  TATAAACTTCATATGGTGACTAGAGTAAGAAGAATC--AAAAAATATAAT  96
      ||||||| |||||||||||||||||| |||||||||  ||||||||||||
seq2  TATAAAC-TCATATGGTGACTAGAGTTAGAAGAATCCAAAAAAATATAAT  99

seq1  TCAGTAATTTCA-TAAAGAATATATCCATAAAAATTACCTTTCTCCTAAA  145
      ||||||  |||| |||||||||||||||||||||||||||||||||| ||
seq2  TCAGTA--TTCATTAAAGAATATATCCATAAAAATTACCTTTCTCCT-AA  146

seq1  AGGAAGAAATAAATGTATCCTATATCCATTGACCATAATATGGAAAAGAT  195
      ||||  |||||||||||||||||||||||||||||| |||||| ||||||
seq2  AGGAGAAAATAAATGTATCCTATATCCATTGACCAT-ATATGG-AAAGAT  194

seq1  TTTCCAGTAATTGAAACTCATCCACTCATACTTGTCAGCACATTATACAC  245
      ||| |||| |||| ||||||||||||||||||||||||||||||||||||
seq2  TTT-CAGT-ATTG-AACTCATCCACTCATACTTGTCAGCACATTATACAC  241

seq1  AAATAAGCATATATATATATATATATGAATTTTATATGAGTCAATATCAA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAGCATATATATATATATATATGAATTTTATATGAGTCAATATCAA  291

seq1  TTATTCATGATGGCTGTGGTAAAAAGTAGAAGAGAGTATTTGTAAAATGT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCATGATGGCTGTGGTAAAAAGTAGAAGAGAGTATTTGTAAAATGT  341

seq1  AATTTGTCAATGAAAGATGAGTTAAATAGTTAAGTTTCAGTTCTTTGCAG  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGTCAATGAAAGATGAGTTAAATAGTTAAGTTTCAGTTCTTTGCAG  391

seq1  TCCTCTTCTGAGAGTGCACTTCTTTACTTTTAAATACAATCACTATGGAC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTTCTGAGAGTGCACTTCTTTACTTTTAAATACAATCACTATGGAC  441

seq1  CTGAGGACTTAGATTCCATTCAAGGAAAACAGTCTCTGAATTCTCACTCG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGACTTAGATTCCATTCAAGGAAAACAGTCTCTGAATTCTCACTCG  491

seq1  GATCTGCTGAGTCTTGATACTGTATATAATGGGGTTCATCAAGGGTGGGA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTGCTGAGTCTTGATACTGTATATAATGGGGTTCATCAAGGGTGGGA  541

seq1  AAAGGATATAAATGTTGCCCATGAGGACCTGAACCAGAGGAGAGAGATGC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGATATAAATGTTGCCCATGAGGACCTGAACCAGAGGAGAGAGATGC  591

seq1  TTCCCAAAGCGGTGAACCATAGTCAGACCAATAATGGGGATGTAGAAAAC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCAAAGCGGTGAACCATAGTCAGACCAATAATGGGGATGTAGAAAAC  641

seq1  CAAAACAGCAGAGATGTGAGATACACATGTTTGCAAAGACTTGATTCTCT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACAGCAGAGATGTGAGATACACATGTTTGCAAAGACTTGATTCTCT  691

seq1  CCTCCCTGGATGCAATCGATAGAACTGTGTGCAGGATCATCACGTAGGAG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCTGGATGCAATCGATAGAACTGTGTGCAGGATCATCACGTAGGAG  741

seq1  GCAAGAATGAGCACTGCATCCAGTAACAGGGTGCAAATCACCAGAGACAG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGAATGAGCACTGCATCCAGTAACAGGGTGCAAATCACCAGAGACAG  791

seq1  AGCATAGAAACTGTTAAAGCGGATATCTGAACAAGCCATTCGAATCAAGT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATAGAAACTGTTAAAGCGGATATCTGAACAAGCCATTCGAATCAAGT  841

seq1  CTTGGTGCAGGCAGAAAGAGTGGGAGAGGAAATGAGGCCTGCAGTAATTT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTGCAGGCAGAAAGAGTGGGAGAGGAAATGAGGCCTGCAGTAATTT  891

seq1  AAGAACTTCAGGCGGATAATAACTGGAGGAATGAGCATAGAACTCCTACA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACTTCAGGCGGATAATAACTGGAGGAATGAGCATAGAACTCCTACA  941

seq1  TAAGATGGCCACTCCGATTTTCAGGATTCTGTCATTGGTTAGGATGGAGG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATGGCCACTCCGATTTTCAGGATTCTGTCATTGGTTAGGATGGAGG  991

seq1  AATAGCGTAGAGGGTTGCAAATGGCAATGTAGCGATCAAAGGACATGGCG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGCGTAGAGGGTTGCAAATGGCAATGTAGCGATCAAAGGACATGGCG  1041

seq1  AGGAGGACAGAGGACTCCATGAAGGACAAACCATGGATGAAGTAAGACTG  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGACAGAGGACTCCATGAAGGACAAACCATGGATGAAGTAAGACTG  1091

seq1  TGCAATGCAGGCATCAAGGCTGATCTCTTGAAGAAATCCCCAAAGAATTC  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATGCAGGCATCAAGGCTGATCTCTTGAAGAAATCCCCAAAGAATTC  1141