BAC Information

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BAC

Clone NameB6Ng01-300F03
Chromosome7 (Build37)
Map Location 83,277,906 - 83,441,427
singlet/doubletdoublet
Overlap geneLOC434200
Upstream geneSv2b, 1500012K07Rik, LOC100042171, Akap13, Klhl25, LOC100042210
Downstream geneEG244071
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-300F03.bB6Ng01-300F03.g
ACCGA094927GA094928
length732177
definitionB6Ng01-300F03.b B6Ng01-300F03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(83,440,696 - 83,441,427)(83,277,906 - 83,278,082)
sequence
gaattctggctgctgaggtgaaggaggaaggaacttggagagagctcctt
agaggaagagcatacatttaaacgcaaatgtgtgcactaattaggtatga
tgggctgtaattttcctgacttccttttgcaaagcaaattgccttttgag
ttgaaatgttctctggctttctttcactcaagtttggccttttatgaaag
tcctcattttcaaaagccaaatttgtttcattttatcctataactaattt
aatgctaattgcacaatggctacattaggcattgttggactgtagcgcat
tgtggtaggaaaaaatcatctgtcatcctgaaaactgtaagcaagcctaa
gagactgttctaagactagtctcagagagctgcctttatgctctatgctg
atggagacaaggcagcagagtgtacgtgtccctggctcttgacacagctg
acacttctaaaaacatgggttctcctcagaattccctcacaccttgccaa
gtaaagaagaatctcagacgttacttttgtagtctattacatagataccc
ctaacaggataaaagtaagttttttttttcttttaatttgggaacattgt
ttgagttcattgttttctttgtctattcaggatataatccaactcatgat
attcctacttcgatcttcaagtgttggaattgcaaacatgtaccacccac
catatttgacttcctcctcctcctcctcctcc

tgtgtctccagaagtcaggtctcataacaactcaatagatgtttgccaaa
ttgtcactgaatttggatgactgctgcatacttctgatatatgttcagtt
cctgtcttttttgtttccatgtatctgtcaaggtagggggactaagtggt
ttagagagatatggagggagggagagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_83440696_83441427
seq2: B6Ng01-300F03.b_44_775 (reverse)

seq1  GGAGGAGGAGGAGGAGGAGGAAGTCAAATATGGTGGGTGGTACATGTTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGAGGAGGAGGAGGAGGAAGTCAAATATGGTGGGTGGTACATGTTTG  50

seq1  CAATTCCAACACTTGAAGATCGAAGTAGGAATATCATGAGTTGGATTATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTCCAACACTTGAAGATCGAAGTAGGAATATCATGAGTTGGATTATA  100

seq1  TCCTGAATAGACAAAGAAAACAATGAACTCAAACAATGTTCCCAAATTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGAATAGACAAAGAAAACAATGAACTCAAACAATGTTCCCAAATTAA  150

seq1  AAGAAAAAAAAAACTTACTTTTATCCTGTTAGGGGTATCTATGTAATAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAAAAAAAACTTACTTTTATCCTGTTAGGGGTATCTATGTAATAGA  200

seq1  CTACAAAAGTAACGTCTGAGATTCTTCTTTACTTGGCAAGGTGTGAGGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAAAAGTAACGTCTGAGATTCTTCTTTACTTGGCAAGGTGTGAGGGA  250

seq1  ATTCTGAGGAGAACCCATGTTTTTAGAAGTGTCAGCTGTGTCAAGAGCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGAGGAGAACCCATGTTTTTAGAAGTGTCAGCTGTGTCAAGAGCCA  300

seq1  GGGACACGTACACTCTGCTGCCTTGTCTCCATCAGCATAGAGCATAAAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACACGTACACTCTGCTGCCTTGTCTCCATCAGCATAGAGCATAAAGG  350

seq1  CAGCTCTCTGAGACTAGTCTTAGAACAGTCTCTTAGGCTTGCTTACAGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCTCTGAGACTAGTCTTAGAACAGTCTCTTAGGCTTGCTTACAGTT  400

seq1  TTCAGGATGACAGATGATTTTTTCCTACCACAATGCGCTACAGTCCAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGATGACAGATGATTTTTTCCTACCACAATGCGCTACAGTCCAACA  450

seq1  ATGCCTAATGTAGCCATTGTGCAATTAGCATTAAATTAGTTATAGGATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTAATGTAGCCATTGTGCAATTAGCATTAAATTAGTTATAGGATAA  500

seq1  AATGAAACAAATTTGGCTTTTGAAAATGAGGACTTTCATAAAAGGCCAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAACAAATTTGGCTTTTGAAAATGAGGACTTTCATAAAAGGCCAAA  550

seq1  CTTGAGTGAAAGAAAGCCAGAGAACATTTCAACTCAAAAGGCAATTTGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGTGAAAGAAAGCCAGAGAACATTTCAACTCAAAAGGCAATTTGCT  600

seq1  TTGCAAAAGGAAGTCAGGAAAATTACAGCCCATCATACCTAATTAGTGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAAAAGGAAGTCAGGAAAATTACAGCCCATCATACCTAATTAGTGCA  650

seq1  CACATTTGCGTTTAAATGTATGCTCTTCCTCTAAGGAGCTCTCTCCAAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTTGCGTTTAAATGTATGCTCTTCCTCTAAGGAGCTCTCTCCAAGT  700

seq1  TCCTTCCTCCTTCACCTCAGCAGCCAGAATTC  732
      ||||||||||||||||||||||||||||||||
seq2  TCCTTCCTCCTTCACCTCAGCAGCCAGAATTC  732


seq1: chr7_83277906_83278082
seq2: B6Ng01-300F03.g_75_251

seq1  TGTGTCTCCAGAAGTCAGGTCTCATAACAACTCAATAGATGTTTGCCAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCTCCAGAAGTCAGGTCTCATAACAACTCAATAGATGTTTGCCAAA  50

seq1  TTGTCACTGAATTTGGATGACTGCTGCATACTTCTGATATATGTTCAGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCACTGAATTTGGATGACTGCTGCATACTTCTGATATATGTTCAGTT  100

seq1  CCTGTCTTTTTTGTTTCCATGTATCTGTCAAGGTAGGGGGACTAAGTGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCTTTTTTGTTTCCATGTATCTGTCAAGGTAGGGGGACTAAGTGGT  150

seq1  TTAGAGAGATATGGAGGGAGGGAGAGG  177
      |||||||||||||||||||||||||||
seq2  TTAGAGAGATATGGAGGGAGGGAGAGG  177


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