BAC Information

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BAC

Clone NameB6Ng01-300N19
Chromosome7 (Build37)
Map Location 94,396,984 - 94,540,044
singlet/doubletdoublet
Overlap geneNox4
Upstream geneVmn2r76, Olfr310, Olfr309, Olfr308, Olfr307, Olfr306-ps1, Olfr305, Olfr304, Olfr303, Olfr301, Olfr1531-ps1, Olfr300-ps1, Olfr299, Olfr298, Olfr297, Olfr296-ps1, Olfr295, Olfr294, Olfr293, Olfr292, Folh1, EG546983, Vmn2r-ps87, LOC637896, EG621430, LOC621477
Downstream geneTyr, Grm5, Ctsc, LOC100039756
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-300N19.bB6Ng01-300N19.g
ACCGA095328GA095329
length1,1831,168
definitionB6Ng01-300N19.b B6Ng01-300N19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(94,396,984 - 94,398,155)(94,538,880 - 94,540,044)
sequence
gaattcagtgcaactagcttcactttcatgattggaggacataggtttat
cttttaatcttagttctctgtgtagtgattaggacatatcaagtctgcag
taagttgcagctgaattaattgatatttttgaaacagattactgtattaa
agctcttgattgtgacatcttcttaacatttaacaccactagctttaact
attggggtcagaaacattgtttcagaaaagaaaaaagagaccccctccct
tattgaagattctgaaattaatatgcttgtcctttctcatctatctaaat
ttggtctatttatctagaactgttctttacattgctttctaaatagtccc
agagaataaagtatttactatttttcaagtgccttacactctgatgcaaa
acagcaaccaaaacccacaagcaaacaaaccaatcaaataattgtaggtt
aataaacacattaagaagaatttctctgatgagttaccaaggacgcctag
cttttcattctctttcttgaaaactcactactcaaagtgaattaataagt
gagaagtttttaaatatgaggtttattttacttaatgcataacacactcg
gtgaacaacttgtaagaaatcacgtgagaattaccctggcagagtttgtt
ctggatcagggtgcttatgttactatccaaatctaagaattataaaagcc
ataactcaactttggagttttactcttaaaataatagaaacgtttccttt
ctaaagggagctaagctaattttgcttgactccaacagggtgggtttcat
gtacttggatgctgtgtaatttgttgttgacaaatcagctaagattaagc
tcgtgtgtacttgcccgtacatacaggaacagatatagtcaaacccattt
taagacacttcaaaatatgctccatgttctactggttattctacgttagt
gcttttgctcaagtgatgttatagaacagagatgtctaagaacctggtgc
attcatgacaggaattgggccacgtgaatggaaagctcagatggggtgga
tggaggaaaaaagaagttgcagtcaagccatgactggatgaactcatgac
ctagtgacacagccaggtggaactacatttcactcagactccgtgtaaac
gaataactccttgtacacgcgttggcttctgaa
gaattcttggaagaggaaccaggtgggaggaacatttgggatataagtaa
ataaataattaattaaaaacatgacaaactatagtgtacatctaggacaa
aattcctccatttttgactattacaatccccatacaatctttacagaact
cagctctacagatctaagagcttcagtactggagatttgggaatggactc
aagagcttgggtatttagttacccactgatgctcaaagaaaaaggttggt
aaccaattgtttaaagctgctatttcagaaaggaataatacacaaagaca
caacaaatatatcaatactggagaaagcactatcataaaagtaatcaatc
caaaaaaaatgtagaagataacaaaatgatgaacacatgaacattctacg
attaactgacatgcttaaacccaaccatatctctattaaattaaaaataa
attgagttaaacttttaatgtacatgaaataaaaatatatagcatttcaa
ggacccatagacccaaaactatagttgatttcaaaacattgagaaaagta
aacaggaaggccataagtatactaaaatattaaacactatcattaaaact
attatcatctcttatttatgattcagctagtcaacaatagtgaaataaaa
aaatgtcaaatatatatactagacagaccatatcctggacaatgaaactg
aatggagtaagctttaaaaagtgaatattatttttaacagtctttctttt
tttcccttatagtttgtgggtatagcacattctggtaggaaaggcacaac
tataggaacatgtggtgattagtaccatcatgcccatagtcaagaatcag
gagaaatgaatgggggtgctcaactctgttctgagacagcaaccaaattg
aatggtgatactttcatagtggcttttttcacattaggtcaatgtctcta
taaaaacccttcacacaaatgtccagagatttatttctaggatgagacta
aaatctgttcaaattaccaattcagatgcaaaaagttgaaagcagaagtt
tttttttcacctccaatatcaagtgaataaacgaacagaaatctgttcat
tctacttgcctttgctatctaacatgctctaatgaactactttctctatg
cttggccctgtccttata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_94396984_94398155
seq2: B6Ng01-300N19.b_49_1231

seq1  GAATTCAGTGCAACTAGCTTCACTTTCATGATTGGAGGACATAGGTTTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGCAACTAGCTTCACTTTCATGATTGGAGGACATAGGTTTAT  50

seq1  CTTTTAATCTTAGTTCTCTGTGTAGTGATTAGGACATATCAAGTCTGCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAATCTTAGTTCTCTGTGTAGTGATTAGGACATATCAAGTCTGCAG  100

seq1  TAAGTTGCAGCTGAATTAATTGATATTTTTGAAACAGATTACTGTATTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTGCAGCTGAATTAATTGATATTTTTGAAACAGATTACTGTATTAA  150

seq1  AGCTCTTGATTGTGACATCTTCTTAACATTTAACACCACTAGCTTTAACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTTGATTGTGACATCTTCTTAACATTTAACACCACTAGCTTTAACT  200

seq1  ATTGGGGTCAGAAACATTGTTTCAGAAAAGAAAAAAGAGACCCCCTCCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGGGTCAGAAACATTGTTTCAGAAAAGAAAAAAGAGACCCCCTCCCT  250

seq1  TATTGAAGATTCTGAAATTAATATGCTTGTCCTTTCTCATCTATCTAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGAAGATTCTGAAATTAATATGCTTGTCCTTTCTCATCTATCTAAAT  300

seq1  TTGGTCTATTTATCTAGAACTGTTCTTTACATTGCTTTCTAAATAGTCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTCTATTTATCTAGAACTGTTCTTTACATTGCTTTCTAAATAGTCCC  350

seq1  AGAGAATAAAGTATTTACTATTTTTCAAGTGCCTTACACTCTGATGCAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAATAAAGTATTTACTATTTTTCAAGTGCCTTACACTCTGATGCAAA  400

seq1  ACAGCAACCAAAACCCACAAGCAAACAAACCAATCAAATAATTGTAGGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAACCAAAACCCACAAGCAAACAAACCAATCAAATAATTGTAGGTT  450

seq1  AATAAACACATTAAGAAGAATTTCTCTGATGAGTTACCAAGGACGCCTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAACACATTAAGAAGAATTTCTCTGATGAGTTACCAAGGACGCCTAG  500

seq1  CTTTTCATTCTCTTTCTTGAAAACTCACTACTCAAAGTGAATTAATAAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCATTCTCTTTCTTGAAAACTCACTACTCAAAGTGAATTAATAAGT  550

seq1  GAGAAGTTTTTAAATATGAGGTTTATTTTACTTAATGCATAACACACTCG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGTTTTTAAATATGAGGTTTATTTTACTTAATGCATAACACACTCG  600

seq1  GTGAACAACTTGTAAGAAATCACGTGAGAATTACCCTGGCAGAGTTTGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAACAACTTGTAAGAAATCACGTGAGAATTACCCTGGCAGAGTTTGTT  650

seq1  CTGGATCAGGGTGCTTATGTTACTATCCAAATCTAAGAATTATAAAAGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGATCAGGGTGCTTATGTTACTATCCAAATCTAAGAATTATAAAAGCC  700

seq1  ATAACTCAACTTTGGAGTTTTACTCTTAAAATAATAGAAACGTTTCCTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTCAACTTTGGAGTTTTACTCTTAAAATAATAGAAACGTTTCCTTT  750

seq1  CTAAAGGGAGCTAAGCTAATTTTGCTTGACTCCAACAGGGTGGGTTTCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGGGAGCTAAGCTAATTTTGCTTGACTCCAACAGGGTGGGTTTCAT  800

seq1  GTACTTGGATGCTGTGTAATTTGTTGTTGACAAATCAGCTAAGATTAAGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTTGGATGCTGTGTAATTTGTTGTTGACAAATCAGCTAAGATTAAGC  850

seq1  TCGTGTGTACTTGCCCGTACATACAGGAACAGATATAGTCAAACCCATTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTGTGTACTTGCCCGTACATACAGGAACAGATATAGTCAAACCCATTT  900

seq1  TAAAGACACTTCAAAATATGCTCCATGTTTCTACT-GTTATTCTACGTTA  949
      | ||||||||||||||||||||||||| ||||||| ||||||||||||||
seq2  T-AAGACACTTCAAAATATGCTCCATG-TTCTACTGGTTATTCTACGTTA  948

seq1  GTGCTTTTGCTCAAGTGATGTTATAGAACAGAGATGTCTAAGAAC--TGT  997
      |||||||||||||||||||||||||||||||||||||||||||||   ||
seq2  GTGCTTTTGCTCAAGTGATGTTATAGAACAGAGATGTCTAAGAACCTGGT  998

seq1  GCATTCATGACAGGGATT-GGCCACGTGAATGAAAAGCTCAGATGGG--T  1044
      |||||||||||||| ||| ||||||||||||| ||||||||||||||   
seq2  GCATTCATGACAGGAATTGGGCCACGTGAATGGAAAGCTCAGATGGGGTG  1048

seq1  GAT-GAGG-AAAAAGAAG-TGCAG-CAAGC--AGACT-GATGAAACTCAT  1087
      ||| |||| ||||||||| ||||| |||||   |||| |||| |||||||
seq2  GATGGAGGAAAAAAGAAGTTGCAGTCAAGCCATGACTGGATG-AACTCAT  1097

seq1  GA-CTAGTGACA---GCAGGTGGACCAACATTTTCAC-CAGACTCCTTGT  1132
      || |||||||||    |||||||| | ||| |||||| |||||||| |||
seq2  GACCTAGTGACACAGCCAGGTGGAACTACA-TTTCACTCAGACTCCGTGT  1146

seq1  AAAAAGGAGTGACCTTTCTTGT-CACGCGTTGCTTTCTGAA  1172
        ||| || | ||  | ||||| |||||||||  |||||||
seq2  --AAACGAATAAC--TCCTTGTACACGCGTTGGCTTCTGAA  1183

seq1: chr7_94538880_94540044
seq2: B6Ng01-300N19.g_70_1237 (reverse)

seq1  TATAA-GACAGGGGCAAGCAT-GAGAAAGTTAGTTCATTTAGGAGCATGT  48
      ||||| ||||||| ||||||| ||||||| |||||||||   ||||||||
seq2  TATAAGGACAGGGCCAAGCATAGAGAAAG-TAGTTCATT--AGAGCATGT  47

seq1  TTAAGATAGGCAAAGCAAGTAGGAATG-ACAGA-TTCTGTCTGTTTATTC  96
      |  ||||||  || ||||||| ||||| ||||| ||||||  ||||||||
seq2  T--AGATAGCAAAGGCAAGTA-GAATGAACAGATTTCTGTTCGTTTATTC  94

seq1  ACTTGATATTGGA-GTG--AAAAAAACTTCTGC-TTCCACTTTGTGCATC  142
      ||||||||||||| |||  |||||||||||||| ||| ||||| ||||||
seq2  ACTTGATATTGGAGGTGAAAAAAAAACTTCTGCTTTCAACTTTTTGCATC  144

seq1  TGGATTGTTAATTTG-ACAGAATTTAGTCTCATCCTAGAAATAAATCTCT  191
      || |||| ||||||| ||||| ||||||||||||||||||||||||||||
seq2  TGAATTGGTAATTTGAACAGATTTTAGTCTCATCCTAGAAATAAATCTCT  194

seq1  GGACATTTGTGTG-AGGGTTTTTATAGAGACATTGACCTAATGTGAAAAA  240
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GGACATTTGTGTGAAGGGTTTTTATAGAGACATTGACCTAATGTGAAAAA  244

seq1  AGCCACTATGAAAGTATCACCATTCAATTTGGTTGCTGTCTCAGAACAGA  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCACTATGAAAGTATCACCATTCAATTTGGTTGCTGTCTCAGAACAGA  294

seq1  GTTGAGCACCCCCATTCATTTCTCCCTGATTCTTGACTATGGGCATGATG  340
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GTTGAGCACCCCCATTCATTTCT-CCTGATTCTTGACTATGGGCATGATG  343

seq1  GTACTAATCACCACATGTTCCTATAGTTGTGCCTTTCCTACCAGAATGTG  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTAATCACCACATGTTCCTATAGTTGTGCCTTTCCTACCAGAATGTG  393

seq1  CTATACCCACAAACTATAAGGGAAAAAAAGAAAGACTGTTAAAAATAATA  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATACCCACAAACTATAAGGGAAAAAAAGAAAGACTGTTAAAAATAATA  443

seq1  TTCACTTTTTAAAGCTTACTCCATTCAGTTTCATTGTCCAGGATATGGTC  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTTTTTAAAGCTTACTCCATTCAGTTTCATTGTCCAGGATATGGTC  493

seq1  TGTCTAGTATATATATTTGACATTTTTTTATTTCACTATTGTTGACTAGC  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTAGTATATATATTTGACATTTTTTTATTTCACTATTGTTGACTAGC  543

seq1  TGAATCATAAATAAGAGATGATAATAGTTTTAATGATAGTGTTTAATATT  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCATAAATAAGAGATGATAATAGTTTTAATGATAGTGTTTAATATT  593

seq1  TTAGTATACTTATGGCCTTCCTGTTTACTTTTCTCAATGTTTTGAAATCA  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTATACTTATGGCCTTCCTGTTTACTTTTCTCAATGTTTTGAAATCA  643

seq1  ACTATAGTTTTGGGTCTATGGGTCCTTGAAATGCTATATATTTTTATTTC  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATAGTTTTGGGTCTATGGGTCCTTGAAATGCTATATATTTTTATTTC  693

seq1  ATGTACATTAAAAGTTTAACTCAATTTATTTTTAATTTAATAGAGATATG  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTACATTAAAAGTTTAACTCAATTTATTTTTAATTTAATAGAGATATG  743

seq1  GTTGGGTTTAAGCATGTCAGTTAATCGTAGAATGTTCATGTGTTCATCAT  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGGTTTAAGCATGTCAGTTAATCGTAGAATGTTCATGTGTTCATCAT  793

seq1  TTTGTTATCTTCTACATTTTTTTTGGATTGATTACTTTTATGATAGTGCT  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTATCTTCTACATTTTTTTTGGATTGATTACTTTTATGATAGTGCT  843

seq1  TTCTCCAGTATTGATATATTTGTTGTGTCTTTGTGTATTATTCCTTTCTG  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCAGTATTGATATATTTGTTGTGTCTTTGTGTATTATTCCTTTCTG  893

seq1  AAATAGCAGCTTTAAACAATTGGTTACCAACCTTTTTCTTTGAGCATCAG  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGCAGCTTTAAACAATTGGTTACCAACCTTTTTCTTTGAGCATCAG  943

seq1  TGGGTAACTAAATACCCAAGCTCTTGAGTCCATTCCCAAATCTCCAGTAC  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTAACTAAATACCCAAGCTCTTGAGTCCATTCCCAAATCTCCAGTAC  993

seq1  TGAAGCTCTTAGATCTGTAGAGCTGAGTTCTGTAAAGATTGTATGGGGAT  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCTCTTAGATCTGTAGAGCTGAGTTCTGTAAAGATTGTATGGGGAT  1043

seq1  TGTAATAGTCAAAAATGGAGGAATTTTGTCCTAGATGTACACTATAGTTT  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATAGTCAAAAATGGAGGAATTTTGTCCTAGATGTACACTATAGTTT  1093

seq1  GTCATGTTTTTAATTAATTATTTATTTACTTATATCCCAAATGTTCCTCC  1140
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATGTTTTTAATTAATTATTTATTTACTTATATCCCAAATGTTCCTCC  1143

seq1  CACCTGGTTCCTCTTCCAAGAATTC  1165
      |||||||||||||||||||||||||
seq2  CACCTGGTTCCTCTTCCAAGAATTC  1168