BAC Information

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BAC

Clone NameB6Ng01-301B07
Chromosome7 (Build37)
Map Location 152,049,764 - 152,201,876
singlet/doubletdoublet
Overlap geneFgf4, Fgf15, Oraov1, Ccnd1
Upstream geneGm498, Shank2, Cttn, Ppfia1, Fadd, Tmem16a, LOC669079, LOC677315, Fgf3
Downstream gene1810010D01Rik, LOC100040049, Tpcn2, Mrgprf, Mrgprd
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-301B07.bB6Ng01-301B07.g
ACCGA095488GA095489
length1,1211,177
definitionB6Ng01-301B07.b B6Ng01-301B07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(152,049,764 - 152,050,856)(152,200,706 - 152,201,876)
sequence
gaattctatccccatctacctcagagttcctgagaccctggtgactaagc
tggaggctctgctgggtgcatctgcctgcttctcttccacatgtagtatc
tggacccttgtcacgttccagctatctttacccaatgatttacttttagt
aaggggtattcatggtgaaaatatgcacgaccagctgtcggagtgcacta
tatggtcaccaagtcaagtaacccttatatttttctttatatattttacg
aatgtaacccctgtcactgagaccaaaatggaagagcagggtcggtggca
tttaaaaaaaagggctgaggtgagggagaacaattaattttaatgaatga
ctttggagtttatacaaaatgaccttagctcgcttcagggaatgcttctc
cccaagatgttaagactctgctgggagacttctgagcaacctcccgaatt
aactttatgggaggctacagacagcaagactggaaaatctcattggcatt
ttttttttttgtctttcacattcctttagaaaactctttgtttggatgct
aatgggatacttaaaatactattctgtaccacagcccaagatggaagaag
ccacaccccaaagctgaggtgggagctcctcccaaacttcctttctgtct
ggtggctcacaggacaataagattttgtgttttttaaatccaggccctag
gctccaagagtgttggggagaagacagttgaaatgtcttttcttcttgtt
attttctaaaagacggtctcatagcccaggctgtacctgaactttgctat
gtcactaaagatgaccttgaatttctgatcctcttgccccatttcctagt
gctaaaggttacaggcattgcccaccacgcccactccttaagtgctggga
attgaaatcaagtgcctgccaaggccactccaccagaggataaggccttc
cctcttttttttgtgggggaggaaaatggtggggtccttactctgtagcc
aaggcttggccttactgccttggagcccaaagtgttgaagaactacaagg
tagaaaggcaactgccctgttctgaatggaattctctctgcagctatgat
ggctttcaaggcaggcctgtg
gaattccacagggctcatggtgatttataatggaaaccttggtgcggctg
ggcattgttctccctgacagagtgaagaaagagaccactaaatcccagcc
catcagaagcagtgatggagcctgccgtgtccggcagtcccgatgccctc
caccacaacaaagtggccttttgtgatttattacatttttctccaaaaac
cttcagccatgcacaaggccagcctagatccccaagtgggctgtccctca
ctgtcccgctgagggagacgccaagtgtcagtctgaataacgcgccttca
atacttcccaggagccggcctggctccaggggataaagccgcccccacac
tttctcaggctcttcaggcctggatgaaagctgccccaagcaggccggcg
acaagtggccaccacgccacctggccttcagcaagaatggactgtctggg
ctgatttggtgactagcccctgctggcgagggcaggagggctctgacagg
gtgagaggttgctggagagagggaaccttccagtgccgcgaagctgatga
gaaaatccagggactcccaggcatccttcaaggtgccagtgggacctggt
agcccagtgtccatgactaaaaagcagaactatcagccacatatcaagca
tagagtaattcgcttttattgattgattatgtatttgcatatgtgcacag
gtacatgtggcgaggggtttgaatgcacacatatacatgtttgtacagcc
aggagatacttcagggggcatccctcaggccccatcaacctttctttgag
ccactcactggtctggagctcactgagtaagctagtgagctggccagtga
gctcgtaaggaccactcttcctccccattgctaagattacaggtgcacac
cccccacttctgggttgacttcctttcttttgatgtgggttctgagaatg
gaaacctaggtctattctccctggcctggaagactccttaaaagaacagt
ttctatgtcctttcaaaggtcgaatctggacaggtgaatctgtcctcatc
tattggatccgtggaatcccctcatcgtttgattctgtttttaaccactg
agcccgaacttacttggggaggaggaccactaatccataccatagccgaa
cgggtcccaatgtcaaacacaaaatgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_152049764_152050856
seq2: B6Ng01-301B07.b_50_1170

seq1  GAATTCTATCCCCATCTACCTCAGAGTTCCTGAGACCCTGGTGACTAAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATCCCCATCTACCTCAGAGTTCCTGAGACCCTGGTGACTAAGC  50

seq1  TGGAGGCTCTGCTGGGTGCATCTGCCTGCTTCTCTTCCACATGTAGTATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGCTCTGCTGGGTGCATCTGCCTGCTTCTCTTCCACATGTAGTATC  100

seq1  TGGACCCTTGTCACGTTCCAGCTATCTTTACCCAATGATTTACTTTTAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACCCTTGTCACGTTCCAGCTATCTTTACCCAATGATTTACTTTTAGT  150

seq1  AAGGGGTATTCATGGTGAAAATATGCACGACCAGCTGTCGGAGTGCACTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGGTATTCATGGTGAAAATATGCACGACCAGCTGTCGGAGTGCACTA  200

seq1  TATGGTCACCAAGTCAAGTAACCCTTATATTTTTCTTTATATATTTTACG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGTCACCAAGTCAAGTAACCCTTATATTTTTCTTTATATATTTTACG  250

seq1  AATGTAACCCCTGTCACTGAGACCAAAATGGAAGAGCAGGGTCGGTGGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAACCCCTGTCACTGAGACCAAAATGGAAGAGCAGGGTCGGTGGCA  300

seq1  TTTAAAAAAAAGGGCTGAGGTGAGGGAGAACAATTAATTTTAATGAATGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAAAAAGGGCTGAGGTGAGGGAGAACAATTAATTTTAATGAATGA  350

seq1  CTTTGGAGTTTATACAAAATGACCTTAGCTCGCTTCAGGGAATGCTTCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGAGTTTATACAAAATGACCTTAGCTCGCTTCAGGGAATGCTTCTC  400

seq1  CCCAAGATGTTAAGACTCTGCTGGGAGACTTCTGAGCAACCTCCCGAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAGATGTTAAGACTCTGCTGGGAGACTTCTGAGCAACCTCCCGAATT  450

seq1  AACTTTATGGGAGGCTACAGACAGCAAGACTGGAAAATCTCATTGGCATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTATGGGAGGCTACAGACAGCAAGACTGGAAAATCTCATTGGCATT  500

seq1  TTTTTTTTTTGTCTTTCACATTCCTTTAGAAAACTCTTTGTTTGGATGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTGTCTTTCACATTCCTTTAGAAAACTCTTTGTTTGGATGCT  550

seq1  AATGGGATACTTAAAATACTATTCTGTACCACAGCCCAAGATGGAAGAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGATACTTAAAATACTATTCTGTACCACAGCCCAAGATGGAAGAAG  600

seq1  CCACACCCCAAAGCTGAGGTGGGAGCTCCTCCCAAACTTCCTTTCTGTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACCCCAAAGCTGAGGTGGGAGCTCCTCCCAAACTTCCTTTCTGTCT  650

seq1  GGTGGCTCACAGGACAATAAGATTTTGTGTTTTTTAAATCCAGGCCCTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGCTCACAGGACAATAAGATTTTGTGTTTTTTAAATCCAGGCCCTAG  700

seq1  GCTCCAAGAGTGTTGGGGAGAAGACAGTTGAAATGTCTTTTCTTCTTGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCAAGAGTGTTGGGGAGAAGACAGTTGAAATGTCTTTTCTTCTTGTT  750

seq1  ATTTTCTAAAAGACGGTCTCATAGCCCAGGCTGTACCTGAAC-TTGCTAT  799
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  ATTTTCTAAAAGACGGTCTCATAGCCCAGGCTGTACCTGAACTTTGCTAT  800

seq1  GTCACTAAAGATGACCTTGAATTTCTGATCCTCTTGCCCCATTTCCTAGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACTAAAGATGACCTTGAATTTCTGATCCTCTTGCCCCATTTCCTAGT  850

seq1  GCT-AAGGTTACAGGCATTGCCCACCACGCCCACTCCTTAGGTGCTGGGA  898
      ||| |||||||||||||||||||||||||||||||||||| |||||||||
seq2  GCTAAAGGTTACAGGCATTGCCCACCACGCCCACTCCTTAAGTGCTGGGA  900

seq1  ATTGAAATCAAGTGCCTGCC-AGGCCACTCCA-CAGA-GAT-AGGCC-TC  943
      |||||||||||||||||||| ||||||||||| |||| ||| ||||| ||
seq2  ATTGAAATCAAGTGCCTGCCAAGGCCACTCCACCAGAGGATAAGGCCTTC  950

seq1  CCTC--TTTTTTGTGGGGGAGGAAA--TGTGGGGT-CTTACTCTGTAGCC  988
      ||||  |||||||||||||||||||   ||||||| ||||||||||||||
seq2  CCTCTTTTTTTTGTGGGGGAGGAAAATGGTGGGGTCCTTACTCTGTAGCC  1000

seq1  AAGGC-TGGCC-TACTGC--TTGAGCCC-AAGTGTTGA--GACTAC-AGG  1030
      ||||| ||||| ||||||  | |||||| |||||||||   ||||| |||
seq2  AAGGCTTGGCCTTACTGCCTTGGAGCCCAAAGTGTTGAAGAACTACAAGG  1050

seq1  TAG-AAGGCACCTGCCCTGTTCTG-ATGGGAT--TCTCTGCAGCTATG-T  1075
      ||| |||||| ||||||||||||| |||| ||  |||||||||||||| |
seq2  TAGAAAGGCAACTGCCCTGTTCTGAATGGAATTCTCTCTGCAGCTATGAT  1100

seq1  TGCTT--CAGGCAGG-CTGTG  1093
       ||||   ||||||| |||||
seq2  GGCTTTCAAGGCAGGCCTGTG  1121

seq1: chr7_152200706_152201876
seq2: B6Ng01-301B07.g_67_1243 (reverse)

seq1  ACATTTTGT-TTTG-CA-TGGGGCCCGTTCTGCTTGTGTGTAGTGTTAGG  47
      ||||||||| |||| || |||| ||||||| |||   || | |  |||| 
seq2  ACATTTTGTGTTTGACATTGGGACCCGTTCGGCTATGGTAT-GGATTAG-  48

seq1  TGGGTCCTCCTCCC--AGT-AGATCTGGCTCCAGGTGGTAAAAACAGAAA  94
        ||||||||||||  ||| || || |||| |||  | ||||||||||| 
seq2  -TGGTCCTCCTCCCCAAGTAAGTTCGGGCT-CAGTGGTTAAAAACAGAAT  96

seq1  CAAACGAATGAGGGAATT-CACGGAT-CAATAGATGAAGGACAGAATTCA  142
      |||||| ||||||| ||| ||||||| ||||||||| ||||||| |||||
seq2  CAAACG-ATGAGGGGATTCCACGGATCCAATAGATG-AGGACAG-ATTCA  143

seq1  CTTGTCCAGATTCGACTTTGAAAAGGACATAGAAATTGTTCTTTTAAGGA  192
      | |||||||||||||| ||  |||||||||||||| ||||||||||||||
seq2  CCTGTCCAGATTCGACCTTTGAAAGGACATAGAAACTGTTCTTTTAAGGA  193

seq1  GTCTTCCAGGCCAGGGAG-ATAGACCTAGG-TTCCATTCTCAGAACCCAC  240
      |||||||||||||||||| ||||||||||| |||||||||||||||||||
seq2  GTCTTCCAGGCCAGGGAGAATAGACCTAGGTTTCCATTCTCAGAACCCAC  243

seq1  ATC-AAAGAAAGGAAGTCAA-CCAGAAGT-GGGGGTGTGCACCTGTAATC  287
      ||| |||||||||||||||| |||||||| ||||||||||||||||||||
seq2  ATCAAAAGAAAGGAAGTCAACCCAGAAGTGGGGGGTGTGCACCTGTAATC  293

seq1  TTAGCAATGGGGAGGAAGAGTGGTCCTTACGAGCTCACTGGCCAGCTCAC  337
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCAATGGGGAGGAAGAGTGGTCCTTACGAGCTCACTGGCCAGCTCAC  343

seq1  TAGCTTACTCAGTGAGCTCCAGACCAGTGAGTGGCTCAAAGAAAGGTTGA  387
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTTACTCAGTGAGCTCCAGACCAGTGAGTGGCTCAAAGAAAGGTTGA  393

seq1  TGGGGCCTGAGGGATGCCCCCTGAAGTATCTCCTGGCTGTACAAACATGT  437
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGCCTGAGGGATGCCCCCTGAAGTATCTCCTGGCTGTACAAACATGT  443

seq1  ATATGTGTGCATTCAAACCCCTCGCCACATGTACCTGTGCACATATGCAA  487
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTGTGCATTCAAACCCCTCGCCACATGTACCTGTGCACATATGCAA  493

seq1  ATACATAATCAATCAATAAAAGCGAATTACTCTATGCTTGATATGTGGCT  537
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATAATCAATCAATAAAAGCGAATTACTCTATGCTTGATATGTGGCT  543

seq1  GATAGTTCTGCTTTTTAGTCATGGACACTGGGCTACCAGGTCCCACTGGC  587
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGTTCTGCTTTTTAGTCATGGACACTGGGCTACCAGGTCCCACTGGC  593

seq1  ACCTTGAAGGATGCCTGGGAGTCCCTGGATTTTCTCATCAGCTTCGCGGC  637
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGAAGGATGCCTGGGAGTCCCTGGATTTTCTCATCAGCTTCGCGGC  643

seq1  ACTGGAAGGTTCCCTCTCTCCAGCAACCTCTCACCCTGTCAGAGCCCTCC  687
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGAAGGTTCCCTCTCTCCAGCAACCTCTCACCCTGTCAGAGCCCTCC  693

seq1  TGCCCTCGCCAGCAGGGGCTAGTCACCAAATCAGCCCAGACAGTCCATTC  737
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCTCGCCAGCAGGGGCTAGTCACCAAATCAGCCCAGACAGTCCATTC  743

seq1  TTGCTGAAGGCCAGGTGGCGTGGTGGCCACTTGTCGCCGGCCTGCTTGGG  787
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGAAGGCCAGGTGGCGTGGTGGCCACTTGTCGCCGGCCTGCTTGGG  793

seq1  GCAGCTTTCATCCAGGCCTGAAGAGCCTGAGAAAGTGTGGGGGCGGCTTT  837
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTTTCATCCAGGCCTGAAGAGCCTGAGAAAGTGTGGGGGCGGCTTT  843

seq1  ATCCCCTGGAGCCAGGCCGGCTCCTGGGAAGTATTGAAGGCGCGTTATTC  887
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCCTGGAGCCAGGCCGGCTCCTGGGAAGTATTGAAGGCGCGTTATTC  893

seq1  AGACTGACACTTGGCGTCTCCCTCAGCGGGACAGTGAGGGACAGCCCACT  937
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGACACTTGGCGTCTCCCTCAGCGGGACAGTGAGGGACAGCCCACT  943

seq1  TGGGGATCTAGGCTGGCCTTGTGCATGGCTGAAGGTTTTTGGAGAAAAAT  987
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGATCTAGGCTGGCCTTGTGCATGGCTGAAGGTTTTTGGAGAAAAAT  993

seq1  GTAATAAATCACAAAAGGCCACTTTGTTGTGGTGGAGGGCATCGGGACTG  1037
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATAAATCACAAAAGGCCACTTTGTTGTGGTGGAGGGCATCGGGACTG  1043

seq1  CCGGACACGGCAGGCTCCATCACTGCTTCTGATGGGCTGGGATTTAGTGG  1087
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGACACGGCAGGCTCCATCACTGCTTCTGATGGGCTGGGATTTAGTGG  1093

seq1  TCTCTTTCTTCACTCTGTCAGGGAGAACAATGCCCAGCCGCACCAAGGTT  1137
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTCTTCACTCTGTCAGGGAGAACAATGCCCAGCCGCACCAAGGTT  1143

seq1  TCCATTATAAATCACCATGAGCCCTGTGGAATTC  1171
      ||||||||||||||||||||||||||||||||||
seq2  TCCATTATAAATCACCATGAGCCCTGTGGAATTC  1177