BAC Information

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BAC

Clone NameB6Ng01-301J10
Chromosome7 (Build37)6 (Build37)
Map Location 115,073,115 - 115,074,21683,963,895 - 83,964,721
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneOlfr710, LOC384651, Olfr6, Olfr711, GA_x5J8B7W6B6J-1784824-1783474, Olfr2, Olfr713, Olfr714, Olfr17, Olfr715, Olfr716, Nlrp14, LOC100042278, 1700012H05Rik, Syt9, Olfml1, Ppfibp2, 5330417H12Rik, Cyb5r2, Ovch2, LOC100042310, Olfr467, Olfr468-ps1, Olfr469, GA_x5J8B7W6B6J-2580381-2580079, Olfr470, Olfr471, LOC626661, Olfr472
Downstream geneOlfr473, LOC669301, Olfr474, Olfr476, Olfr477, LOC626732, Olfr478, Olfr479, Olfr480, Olfr481, LOC100043059, Olfr482, Olfr483, Olfr484, Olfr485, Olfr486, Olfr487, Olfr1538-ps1, Olfr488, LOC546990, Olfr489-ps1, Olfr490, LOC626881, Olfr491, Olfr492, Olfr493, Olfr494, Olfr495, Olfr496-ps1, Olfr497, Olfr498, Olfr499-ps1, Olfr500-ps1, Olfr501-ps1, Olfr502, LOC269980, Olfr503, Olfr504, Olfr505-ps1, Olfr506, Olfr507, Olfr508, Olfr509, Olfr510, Olfr511-ps1, Olfr512, Olfr513, Olfr514, Olfr515-ps1, Olfr516, Olfr517, Olfr518, Olfr519, Nlrp10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-301J10.bB6Ng01-301J10.g
ACCGA095860GA095861
length1,107745
definitionB6Ng01-301J10.b B6Ng01-301J10.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(115,073,115 - 115,074,216)(83,963,895 - 83,964,721)
sequence
gaattcaatctttaaaggcacttataataaaataatactaaaagagagca
tgtgcatccatacaccagactaacacggggatagggtatgagtaaatggg
ttatgagaatgccaaggttccaggaggttgagtttccttgaaactctttg
cctcgtgagtgcttccaggcctctcagcctgccaagcagacttcactgga
gtgtgcgtagcaggaagacagagtatttgggtgaattgagtcaagtattt
aatgtacatgttgtattacctgcaaagggatatgagtgctcaggtgtttc
agaaggccgtcataaagtgctgtattgagcagtaggaagacataggttca
agatacctaaaaaagtgtgaatcttatatacagaattttagcatcaacat
aatgaaaatgatgttcatcaggaaaatgaacaattgtttgataaaatatg
ttcattatttattattttatctttcattttgaacatggcttttcaacttg
attaaaagtttaattggaatgtcctcttatatcaccatactagttagcat
caattaacaaagtttctcattttttatggatgtcctatattctgggaaac
taaagccacttcattgccttttgataaacaatgaaaaagattttgaaagt
acatcatagcaggttaatgccccataggaatgactagccaggtcttaatg
agtcatctggctccaagagtcatttctattaaaaaaaaataagaaaagaa
aaaaatgtaggagcctgtgtctcaagggacagatggcaatagccccaagg
gtttgccttgtttgctgagagcatcttttctctcccttcatgctcaaaga
tatccatcgccatctctattgcatgtgtatccttggccagtgagagtatt
tgaatagtttactttgtgttcagtccccaacttttttataaagtaaatgg
gaacacaacttcataaagttccttttggaattcagtgttccacaactctg
cttctagatggttaggtgcaagagtcatgggttatgttgacaagattatt
taaatgatggagatcaagcaagagaaggccccggggtattcttgacccag
cttaact
gaattcactctgctgtgtcctgaaaacatttttttatccctagtcatcta
caagctctggctcttaaaatctttccaccctctctccaaaattatcataa
ccttggaaagaaagaggtcacacacacacacacacacacacacacacata
cacagagagagagagagagagagagagtgagagagagagagagagagaga
gagagagagagagagagagagagaggtgatatacatatatatctcccatt
atagtgctgagccttccagtctctaattctctgcacattggcaagtaatg
ctaatctccttctattacaaaaagaatctgtgctgggcagtggtggccca
tgcctttgatcccagcacttgggaggcagaggcaggtggatttctgagtt
cgagactagcctggtttacaaagtgagttccaggacagccagggctacac
agagaaaacctgtctcgaaaaaaaaacaaaaaacaaaacaaaaaaaacac
aaataaaaaaaaaaacaaaaaacaaacgcaaaaaaaaagagccttaaaaa
aaaaaaaaaggaatctgtgacaatgagagttcaaaggtgtactaatgtat
tggtataatattaagtcatagcaaattggtttgatactatgtcccattga
ggggaataatggtgatgggggctttccctagggtctatgacctgtctaac
acagattttggctctcgtagcggtataaggtatgatattcatctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_115073115_115074216
seq2: B6Ng01-301J10.b_43_1149

seq1  GAATTCAATCTTTAAAGGCACTTATAATAAAATAATACTAAAAGAGAGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATCTTTAAAGGCACTTATAATAAAATAATACTAAAAGAGAGCA  50

seq1  TGTGCATCCATACACCAGACTAACACGGGGATAGGGTATGAGTAAATGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCATCCATACACCAGACTAACACGGGGATAGGGTATGAGTAAATGGG  100

seq1  TTATGAGAATGCCAAGGTTCCAGGAGGTTGAGTTTCCTTGAAACTCTTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGAGAATGCCAAGGTTCCAGGAGGTTGAGTTTCCTTGAAACTCTTTG  150

seq1  CCTCGTGAGTGCTTCCAGGCCTCTCAGCCTGCCAAGCAGACTTCACTGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCGTGAGTGCTTCCAGGCCTCTCAGCCTGCCAAGCAGACTTCACTGGA  200

seq1  GTGTGCGTAGCAGGAAGACAGAGTATTTGGGTGAATTGAGTCAAGTATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCGTAGCAGGAAGACAGAGTATTTGGGTGAATTGAGTCAAGTATTT  250

seq1  AATGTACATGTTGTATTACCTGCAAAGGGATATGAGTGCTCAGGTGTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTACATGTTGTATTACCTGCAAAGGGATATGAGTGCTCAGGTGTTTC  300

seq1  AGAAGGCCGTCATAAAGTGCTGTATTGAGCAGTAGGAAGACATAGGTTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGCCGTCATAAAGTGCTGTATTGAGCAGTAGGAAGACATAGGTTCA  350

seq1  AGATACCTAAAAAAGTGTGAATCTTATATACAGAATTTTAGCATCAACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATACCTAAAAAAGTGTGAATCTTATATACAGAATTTTAGCATCAACAT  400

seq1  AATGAAAATGATGTTCATCAGGAAAATGAACAATTGTTTGATAAAATATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAAATGATGTTCATCAGGAAAATGAACAATTGTTTGATAAAATATG  450

seq1  TTCATTATTTATTATTTTATCTTTCATTTTGAACATGGCTTTTCAACTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTATTTATTATTTTATCTTTCATTTTGAACATGGCTTTTCAACTTG  500

seq1  ATTAAAAGTTTAATTGGAATGTCCTCTTATATCACCATACTAGTTAGCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAAGTTTAATTGGAATGTCCTCTTATATCACCATACTAGTTAGCAT  550

seq1  CAATTAACAAAGTTTCTCATTTTTTATGGATGTCCTATATTCTGGGAAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTAACAAAGTTTCTCATTTTTTATGGATGTCCTATATTCTGGGAAAC  600

seq1  TAAAGCCACTTCATTGCCTTTTGATAAACAATGAAAAAGATTTTGAAAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCCACTTCATTGCCTTTTGATAAACAATGAAAAAGATTTTGAAAGT  650

seq1  ACATCATAGCAGGTTAATGCCCCATAGGAATGACTAGCCAGGTCTTAATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCATAGCAGGTTAATGCCCCATAGGAATGACTAGCCAGGTCTTAATG  700

seq1  AGTCATCTGGCTCCAAGAGTCATTTCTATTAAAAAAAAATAAGAAAAGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATCTGGCTCCAAGAGTCATTTCTATTAAAAAAAAATAAGAAAAGAA  750

seq1  AAAAATGTAGGAGCCTGTGTCTCAAGGGACAGATGGCAATAGCCCCAAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATGTAGGAGCCTGTGTCTCAAGGGACAGATGGCAATAGCCCCAAGG  800

seq1  GTTTGCCTTGTTTGCTGAGAGCATCTTTTCTCTCCCTTCATGCTCAAAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCCTTGTTTGCTGAGAGCATCTTTTCTCTCCCTTCATGCTCAAAGA  850

seq1  TATCCATCGCCATCTCTATTGCATGTGTATCCTTGGCCAGTGAGAGTA-T  899
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TATCCATCGCCATCTCTATTGCATGTGTATCCTTGGCCAGTGAGAGTATT  900

seq1  TGAATAGTTTACTTTGTGTTCAGTCCCCAACTTTTTATAAAAGTAAAT-G  948
      ||||||||||||||||||||||||||||||||||||   ||||||||| |
seq2  TGAATAGTTTACTTTGTGTTCAGTCCCCAACTTTTTTATAAAGTAAATGG  950

seq1  GAACACAACTTCATAAAGTTCCTTTTGGAATTCAGTGT--CACAACTCTG  996
      ||||||||||||||||||||||||||||||||||||||  ||||||||||
seq2  GAACACAACTTCATAAAGTTCCTTTTGGAATTCAGTGTTCCACAACTCTG  1000

seq1  CTTCTAGATGG-TAAGTGCAAGAGTCATGGGTTATGTTGACAAAGATA-T  1044
      ||||||||||| || ||||||||||||||||||||||||||||   || |
seq2  CTTCTAGATGGTTAGGTGCAAGAGTCATGGGTTATGTTGACAAGATTATT  1050

seq1  TAAATGATGAAGAAGGCAAGCAAGAGAA-GCCCCGGGGTATTCCTGACAC  1093
      ||||||||| |||   |||||||||||| |||||||||||||| |||| |
seq2  TAAATGATGGAGA--TCAAGCAAGAGAAGGCCCCGGGGTATTCTTGACCC  1098

seq1  AGCTAAACT  1102
      |||| ||||
seq2  AGCTTAACT  1107

seq1: chr6_83963895_83964721
seq2: B6Ng01-301J10.g_217_554 (reverse)

seq1  TTTTTTTTTTTG---GTTTTTCGAGACAGGGTTTCTCTGTGTAGCCCTGG  47
      |||| |||||||    |||||||||||||| |||||||||||||||||||
seq2  TTTTGTTTTTTGTTTTTTTTTCGAGACAGGTTTTCTCTGTGTAGCCCTGG  50

seq1  CTGTCCTGGAACTCACTTTGTAGACCAGGCTGGCCTTGAACTCAGAAATC  97
      |||||||||||||||||||||| |||||||| | || |||||||||||||
seq2  CTGTCCTGGAACTCACTTTGTAAACCAGGCTAGTCTCGAACTCAGAAATC  100

seq1  CGCCTGCCTCTGCCTCCGGGGTGCTGGGATTAAAGGCATACGCCACCAC-  146
      | |||||||||||||||   |||||||||| ||||||||  |||||||| 
seq2  CACCTGCCTCTGCCTCCCAAGTGCTGGGATCAAAGGCATGGGCCACCACT  150

seq1  GCCCGGCTAATTTCCTTTTTCTTACCTCTATCAGTCTGGAAACATGA--T  194
      |||| ||  |  | |||||| | |    ||  ||      | ||| |  |
seq2  GCCCAGCACAGATTCTTTTTGTAA----TAGAAGGAGATTAGCATTACTT  196

seq1  GTCTAAGCACAACAAACAAACAGAAACCCCATCTGGAATTCTACAAACTA  244
      | | | |     || | ||  ||| |      ||||||  ||    ||||
seq2  GCCAATG---TGCAGAGAATTAGAGA------CTGGAAGGCTCAGCACTA  237

seq1  CTTCACAATTGATCTCATTCCCATTGAACTTCCAGTTGACCTTCTTACCT  294
        | |     ||| | ||    ||   || ||    |  |  |||   ||
seq2  --TAATGGGAGATAT-ATATGTATATCACCTCTCTCTCTCTCTCT---CT  281

seq1  TTCAACTGGTGAATAGTTTGCTCTCTCTCTCTCTGTAGATGCAAATCT-A  343
       ||              |  |||||||||||||| |   |   | |||  
seq2  CTC--------------TCTCTCTCTCTCTCTCTCTCTCTCTCACTCTCT  317

seq1  CAAATACCCACTATC-ATGAGACCCCTAATGCCTTCATGATAAACCATGG  392
      |     | | || ||  || |                             
seq2  CTCTCTCTCTCTCTCTCTGTG-----------------------------  338

seq1  TAATCATTGACATATTGGCATCCTAGTTCAACAGTTCCTGATGCATCAGG  442
                                                        
seq2  --------------------------------------------------  338

seq1  TTGTCCAAGATTCTGTCTCTTGCTCTGTTCTCTCCAGGCAATGTCTTTGT  492
                                                        
seq2  --------------------------------------------------  338

seq1  CAATATGTGATAGCATAGCATCATAATTCATATTCACAATATCTAAAAGA  542
                                                        
seq2  --------------------------------------------------  338

seq1  AGGAAAAGGTACTGGAGAAGCATGCGTTTTCTCCATAAAGGCACACGGAC  592
                                                        
seq2  --------------------------------------------------  338

seq1  AGTTACATACATATTTCCTCCTTCTATTTCATTGATCTCATATTCAAATC  642
                                                        
seq2  --------------------------------------------------  338

seq1  TAGCTGCAAGGGAGTCTGGGGAAATATAGTTTTTAATTTGGATATCAAGT  692
                                                        
seq2  --------------------------------------------------  338

seq1  GCCAGATAAAACTGTGGGAAATATCAGTAGAAGAAAGAAGAACTGATATG  742
                                                        
seq2  --------------------------------------------------  338

seq1  GAGGGTAAGCTCCATTCTCCATTTTAGCTTCTCTCTCTCTCTCTCTCTCT  792
                                                        
seq2  --------------------------------------------------  338

seq1  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTG  827
                                         
seq2  -----------------------------------  338