BAC Information

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BAC

Clone NameB6Ng01-301L08
Chromosome7 (Build37)
Map Location 13,801,151 - 13,802,189
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043092, V1rg9, V1rg12, V1rg8, V1rg11, Zfp551, EG666065, Zfp606, 2900092C05Rik, EG637908, EG666085, Vmn2r55, LOC629079, LOC629081, EG232875, LOC100043128, LOC100042515, Zfp329, Zfp110, Zfp128, Zscan22, Rps5, 2310014L17Rik, 1810019N24Rik, Zfp324, Zfp446, Slc27a5, ZBTB45, LOC100042553, Trim28, Chmp2a, Ube2m, Mzf1, V1rj3, LOC100043156, V1rk1, LOC666177, EG232887
Downstream geneV1rj2, 6330408A02Rik, Lig1, Pla2g4c, LOC666225, Cabp5, LOC666232, Gm767, LOC666243, 9230107M04Rik, EG666256, LOC666267, LOC100042624, LOC100043194, Sult2a1, EG620627, EG434121, EG629203, LOC677512
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-301L08.bB6Ng01-301L08.g
ACCGA095950GA095951
length1,2011,042
definitionB6Ng01-301L08.b B6Ng01-301L08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagtaagaatgttgcctattcagtgacattcagaattgcctctag
tatagtaagagagatagtgaaagaaatcagacattactatctactacaca
gagttagaaatttcagggcaagctacatccatatgcaggaatttaccatt
atctaggaagtttgtgatctaaggagaaaccaaagtagatacttactgag
ttacacccatacacaggaatttacaatggcgtagggggaaggtggactat
acaacagactagaataggaactaaggcaagggcacaaagccctagcccct
gacttctaagataaagctgaccttgggtggggctgcttttgatcccagtg
gttaactttgaattttattccagctggttcctgacagtcctttgtgtttg
cattcctctgttttgtgtaggagtcataaaggtacctcactggtgtgtca
tctaacttccctattttcttctgtataaaaagtttgatgctctatttgac
acattacattcagatccacactcccggtttgtcccccattctcgcccatc
tgtccgagaccctgattcccatggattgaggggggccaactgggcccagt
ccatggcaatcagctccactgtattgaggataatagatctatctcacata
gtggctgggagactagatggggagactaggtacagggcagaacacacttc
aagagagatcagtaactttccactgtcatgacagcttatactgaatgcag
gcagacatcaataatcaaccacaaaatttacccttgaactcaaggatcct
tctctaggcagcatcaccaatggagaatagttagcccatgacatgtatgg
tttgatatgaaatgctctccacaggctcatactttgaatgctcatctaca
gcttggtgatactatttggggaggctgtgaaaacttcaagaaatggggcc
tacccaatggaaacagggtcactaggtcactatttaagaggttatacagg
tcttggtcctggtcttactctgcttccttatgtgctgtgattgtgagagc
ctcccccacacactctgtggccacaaaccctaccatgcgtccctacagat
gggaccaactgtcagtcatgaactaaatatttctttctcatcagtgtcta
accatagttataccaaaggttaacccataaaatatgggtcttttcccact
g
gaattcatgtggaaagccagttctttctttgtttttatttttttctttta
caaaatctgtttaccagtatttaaattccattttcttgaatgacaaaaat
cgtgcatgctaatcttttgtgatctcattgtccgttgatggcatcttcct
gtgctagtcatagagtgagtctgttcaatttctgttcagatgatagtttg
gtattttattcaagacctattattctttgcaggagcaaatactaaagaca
tggctagtagagggaattttcaggactgtgctaggagaaatatgtatgaa
aagttgaagaaattaagggtagatacaggacaaggagaaagggtgaataa
aaacaaacttctgttgaatattgagtagggtaaccaccaatccttggtaa
aacacaggaaggtgtgagtgattccaaggaaataaatgtgagcctaaaaa
atctataagacaaggagagatgagtatcaaaattaatacaatataaacag
cattaggccaaaccaactacatttcccatgtcttgtccatttttttcaat
ttttattagatattttcttcatttacatttcaaatgtgagtcccctatac
cctctccccgccctgctcccctacccacccactcccacttcttggccctg
gtgttcccctgtactggggcatataaaatttgcaagaccaaggggcctct
attcccaatgatggccgactaggccatcttctgatacacatgcagctaga
gacacgagctccgggggtactggttagttcatattgttgttccacctata
gggttgtcttggccacttttaaaggctttcattttctcagatataaattg
aacataactatgaaaattatataaatcataaggtatgatatactctcaat
atcaagtctatcaattctgtcaaatttaaatataatattcctatcatcta
tcctaacttatgaattttataattttgtgtttgaaattatgttgattttt
ttactggtactaccaatctgaaaaccacttcaatcagaacat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_13801151_13802189
seq2: B6Ng01-301L08.g_69_1110

seq1  GAATTCATGTGGAAAGCCAGTTCTTTCTTTGTTTTTATTTTTTTCTTTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGTGGAAAGCCAGTTCTTTCTTTGTTTTTATTTTTTTCTTTTA  50

seq1  CAAAATCTGTTTACCAGTATTTAAATTCCATTTTCTTGAATGACAAAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATCTGTTTACCAGTATTTAAATTCCATTTTCTTGAATGACAAAAAT  100

seq1  CGTGCATGCTAATCTTTTGTGATCTCATTGTCCGTTGATGGCATCTTCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGCATGCTAATCTTTTGTGATCTCATTGTCCGTTGATGGCATCTTCCT  150

seq1  GTGCTAGTCATAGAGTGAGTCTGTTCAATTTCTGTTCAGATGATAGTTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTAGTCATAGAGTGAGTCTGTTCAATTTCTGTTCAGATGATAGTTTG  200

seq1  GTATTTTATTCAAGACCTATTATTCTTTGCAGGAGCAAATACTAAAGACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTTATTCAAGACCTATTATTCTTTGCAGGAGCAAATACTAAAGACA  250

seq1  TGGCTAGTAGAGGGAATTTTCAGGACTGTGCTAGGAGAAATATGTATGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTAGTAGAGGGAATTTTCAGGACTGTGCTAGGAGAAATATGTATGAA  300

seq1  AAGTTGAAGAAATTAAGGGTAGATACAGGACAAGGAGAAAGGGTGAATAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGAAGAAATTAAGGGTAGATACAGGACAAGGAGAAAGGGTGAATAA  350

seq1  AAACAAACTTCTGTTGAATATTGAGTAGGGTAACCACCAATCCTTGGTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAACTTCTGTTGAATATTGAGTAGGGTAACCACCAATCCTTGGTAA  400

seq1  AACACAGGAAGGTGTGAGTGATTCCAAGGAAATAAATGTGAGCCTAAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAGGAAGGTGTGAGTGATTCCAAGGAAATAAATGTGAGCCTAAAAA  450

seq1  ATCTATAAGACAAGGAGAGATGAGTATCAAAATTAATACAATATAAACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATAAGACAAGGAGAGATGAGTATCAAAATTAATACAATATAAACAG  500

seq1  CATTAGGCCAAACCAACTACATTTCCCATGTCTTGTCCATTTTTTTCAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAGGCCAAACCAACTACATTTCCCATGTCTTGTCCATTTTTTTCAAT  550

seq1  TTTTATTAGATATTTTCTTCATTTACATTTCAAATGTGAGTCCCCTATAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTAGATATTTTCTTCATTTACATTTCAAATGTGAGTCCCCTATAC  600

seq1  CCTCTCCCCGCCCTGCTCCCCTACCCACCCACTCCCACTTCTTGGCCCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCCCCGCCCTGCTCCCCTACCCACCCACTCCCACTTCTTGGCCCTG  650

seq1  GTGTTCCCCTGTACTGGGGCATATAAAATTTGCAAGACCAAGGGGCCTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCCCCTGTACTGGGGCATATAAAATTTGCAAGACCAAGGGGCCTCT  700

seq1  ATTCCCAATGATGGCCGACTAGGCCATCTTCTGATACACATGCAGCTAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCAATGATGGCCGACTAGGCCATCTTCTGATACACATGCAGCTAGA  750

seq1  GACACGAGCTCCGGGGGTACTGGTTAGTTCATATTGTTGTTCCACCTATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACGAGCTCCGGGGGTACTGGTTAGTTCATATTGTTGTTCCACCTATA  800

seq1  GGGTTGTCTTGGCCACTTTTAAAGGC-TTCATTTTCTCAGATATAAATTG  849
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GGGTTGTCTTGGCCACTTTTAAAGGCTTTCATTTTCTCAGATATAAATTG  850

seq1  AACATAACTATGAAAATTATATAAATCATAAGGTATGATATACTCTCAAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATAACTATGAAAATTATATAAATCATAAGGTATGATATACTCTCAAT  900

seq1  ATCAAGTCTATCAATTCTGTCAAA-TTAAATATAATATT-CTATCATCTA  947
      |||||||||||||||||||||||| |||||||||||||| ||||||||||
seq2  ATCAAGTCTATCAATTCTGTCAAATTTAAATATAATATTCCTATCATCTA  950

seq1  TCCTAACTTAATGATTTTATAATTTTGTGTTTG-AATTATGTTGA-TTTT  995
      ||||||||||   |||||||||||||||||||| ||||||||||| ||||
seq2  TCCTAACTTATGAATTTTATAATTTTGTGTTTGAAATTATGTTGATTTTT  1000

seq1  TTACTTGTACTACC-ATCTGAAAACCACTTTCAAATCCAGAACAT  1039
      ||||| |||||||| ||||||||||||| |||||   ||||||||
seq2  TTACTGGTACTACCAATCTGAAAACCAC-TTCAA--TCAGAACAT  1042