BAC Information

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BAC

Clone NameB6Ng01-301O02
Chromosome7 (Build37)
Map Location 120,887,766 - 120,888,540
singlet/doubletsinglet
Overlap genenone
Upstream geneTead1, 4632411J06Rik, LOC434227, Arntl, A630005I04Rik, Btbd10, Pth, LOC100042736, Mlstd2, EG434228
Downstream geneSpon1, Rras2, LOC668451, Copb1, Psma1, 4933406I18Rik, Pde3b, Cyp2r1, Calca, LOC100043295, Calcb
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-301O02.g
ACCGA096078
length770
definitionB6Ng01-301O02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccctcactgcgtgagggactgtcaccaatgactgtctcctgcttt
actttctgtgggttctgttttatgctgtgatacaagaagggatgttttga
tttgttttgttttgttttgttttgtttggtttcgtttccactataggaac
ttttctataccgggaagatatcaagccctgaaacaggtctataagccctg
gttagagcgtggacattcattgaaaagatggggctaagggttcaggctaa
tgactaataggcaaaggaagtgcctattgaacatgcaggaaacaatacat
tagatttttttatgggattctgctttaacagttacagtgttcctgcaaag
cagtattctcctagttttgaagatgaagaatctggggctaataaagatta
catgtctctgatgccacaaagccaggaaatggtgcaagtggctcgtgaac
cggcactgtcatagcaaacaacataccttcctgcactatgtgtgggtggg
ctgtggagtgttcgggtgacgcacagataatgagcttcaatgcatccata
catcccactcccaagggctgacaactccccccgcaggtatagaacctcta
cgttgatcacaggtactccctgatactcagcatccagaaccaaaaccaga
accagaactgtgtgaacagaagaattgggcttggggagataactctgtcc
attactccccatatctacgagaatagcgaccacagacatgacgatgtgga
cctctcaacccgttctcccc
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_120887766_120888540
seq2: B6Ng01-301O02.g_64_833 (reverse)

seq1  GGGGAGGATGGGTTGAGAGGTCCACATCGTCAAGGGTGTGGTTGCTATTC  50
      |||||| | ||||||||||||||||||||||| |  |||||| |||||||
seq2  GGGGAGAACGGGTTGAGAGGTCCACATCGTCATGTCTGTGGTCGCTATTC  50

seq1  CTGTAGCTAAGTGGAGTAAAGAGGCTGA-TTTTTTCCCCAAGCCCAATTC  99
        |||| || | ||||||| | | | || || | ||||||||||||||||
seq2  TCGTAGATATGGGGAGTAATG-GACAGAGTTATCTCCCCAAGCCCAATTC  99

seq1  TTCTGTTCACACAGTTCTGGTTCTGGTTCTGGTTCTGGATGCTGAGTATC  149
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TTCTGTTCACACAGTTCTGGTTCTGGTTTTGGTTCTGGATGCTGAGTATC  149

seq1  AGGGAGAACCTTGGATCAACCTAAAGGTTCTATAACTGCTTGGGTTGAGT  199
      |||||| ||||  ||||||| || |||||||||| ||||  |||  ||||
seq2  AGGGAGTACCTGTGATCAACGTAGAGGTTCTATACCTGC--GGGGGGAGT  197

seq1  CGTCAGCCCATGGGAGAGGGATGTATGGATGCACTGAAGCTCATTACTCT  249
       |||||||| |||||| |||||||||||||||| |||||||||||| |||
seq2  TGTCAGCCCTTGGGAGTGGGATGTATGGATGCATTGAAGCTCATTA-TCT  246

seq1  GTGCGTCACCCGAACACACCACAGCCCACCCACACATAGTGCAGGAAGGT  299
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GTGCGTCACCCGAACACTCCACAGCCCACCCACACATAGTGCAGGAAGGT  296

seq1  ATTTTGTTTGCTATGACAGTCTTGGTTCAAGAGCCACTTACACCATTTCC  349
      || |||||||||||||||||   |||||| ||||||||| ||||||||||
seq2  ATGTTGTTTGCTATGACAGTGCCGGTTCACGAGCCACTTGCACCATTTCC  346

seq1  TGGCTCTGTGGCATCAGAGACATGTAAACTTTCTTAGCCCCAGATTCCTC  399
      ||||| ||||||||||||||||||||| |||| |||||||||||||| ||
seq2  TGGCTTTGTGGCATCAGAGACATGTAATCTTTATTAGCCCCAGATTCTTC  396

seq1  ATCTTCAAAACTAGGAGAATACTGCTTTGCAGGAACACTGTAACTGTTAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCAAAACTAGGAGAATACTGCTTTGCAGGAACACTGTAACTGTTAA  446

seq1  AGCAGAATCCCATAAAAAAATCTAATCTATTGTCTCCTGCATGTTCAATA  499
      |||||||||||||||||||||||||| |||||| ||||||||||||||||
seq2  AGCAGAATCCCATAAAAAAATCTAATGTATTGTTTCCTGCATGTTCAATA  496

seq1  GGCACTTCCTTTGCCTCTTAGTCATTAGCCTGAACCCTTAGCCCCATCTT  549
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GGCACTTCCTTTGCCTATTAGTCATTAGCCTGAACCCTTAGCCCCATCTT  546

seq1  TTCAATGAATGTCCACGCTCTAACCAGGGCTTATAGACCTGTTTCAGGGC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATGAATGTCCACGCTCTAACCAGGGCTTATAGACCTGTTTCAGGGC  596

seq1  TTGATATCTTCCTGGTATAGAAAAGTTCCTCTAGTGGAAACGAAACAAAA  649
      |||||||||||| ||||||||||||||||| ||||||||||||||| |||
seq2  TTGATATCTTCCCGGTATAGAAAAGTTCCTATAGTGGAAACGAAACCAAA  646

seq1  CAAAACAAAACAAAACAAAACAAAACAAAACATCCCTTCTTGTATCACAG  699
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CAAAACAAAACAAAACAAAACAAATCAAAACATCCCTTCTTGTATCACAG  696

seq1  CATAAAACAGAATACCACAGAAAGTAAAGCAGGAGACAGTCATTGGTGAC  749
      ||||||||||||  ||||||||||||||||||||||||||||||||||||
seq2  CATAAAACAGAA-CCCACAGAAAGTAAAGCAGGAGACAGTCATTGGTGAC  745

seq1  AGTGACCTCACACAGTGATGGAATTC  775
      |||  |||||| |||||| |||||||
seq2  AGT-CCCTCACGCAGTGAGGGAATTC  770