BAC Information

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BAC

Clone NameB6Ng01-302D09
Chromosome7 (Build37)
Map Location 4,747,645 - 4,878,366
singlet/doubletdoublet
Overlap geneUbe2s, D430041B17Rik, Isoc2b, Isoc2a, LOC384524, Zfp628, Nat14, A430110N23Rik
Upstream geneLOC100041146, Pira2, LOC675749, LOC100038908, LOC100038909, Pira11, Pira3, LOC100041186, LOC664841, Lair1, Ttyh1, Leng8, Leng9, Cdc42ep5, LOC384521, EG232801, Ncr1, Gp6, LOC100041851, Atp6v0c-ps1, Rdh13, Eps8l1, Ppp1r12c, Tnnt1, Tnni3, 6030429G01Rik, Syt5, Ptprh, LOC669557, Tmem86b, Saps1, EG628211, 1500019G21Rik, Brsk1, BC022651, Suv420h2, Cox6b2, 4930401F20Rik, Il11, 4930572D21Rik, 2210411K11Rik, Rpl28
Downstream geneLOC665049, Gm1079, Gm1078, Zfp579, Fiz1, Zfp524, 6430526N21Rik, 4632433K11Rik, Zfp784, Zfp580, Ccdc106, U2af2, Epn1, Rfpl4, Rasl2-9, EG665126, V1rd5, V1rd3, EG665150, Nlrp2, EG272350, V1rd4, EG665163, V1rd10, EG630071, EG665255, EG636697, EG636705, LOC636731, LOC673215, V1rd2, LOC100041627, LOC100041637, V1rd1, LOC100041647, V1rd11
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-302D09.bB6Ng01-302D09.g
ACCGA096322GA096323
length717490
definitionB6Ng01-302D09.b B6Ng01-302D09.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(4,747,645 - 4,748,357)(4,877,871 - 4,878,366)
sequence
gaattcaccctctttgaaaaagcatgtgtaggggctagagggaaggctca
gcagttaagcactggctgctcttccagagagttctgacctcatttctcag
tattcagctttggatcacaccatctataatgggatctgatgccctcttct
ggcacacaggtgtacatgcagacttaggactcaaatgaatgtaaaaaagc
caatgtggtacatgcaggaggtcagaggaggatggtgtcctgattgttcc
ttttaagacagtcccattgaattggatttaggctcggaagtcagcaaccc
ccagcttgtctctgcccacctttgtgctgggagtacagtacagctgtgtg
gcagcatctggctctgttgtccatgaatcagtttgcacatggggaggtca
gaggacaatacatggttttattcctatacttttaggtggattctggaggt
caaactcaggttgccagccttgagggcaagctccttttactaagcttttt
tttgtttttcgagacagggtttctctgtgtagccctgactgtcctggaac
tcactttgtggaccaggctggcctccaactcaaaaatccaccctgcctct
acctcccaagtgctgggattaaaaggtgtgtgccaccacgcccctgcttt
cactaaactatcttgttagtccatgactagctttgtaaacaattttttgt
tttactcagtgtaactc
aggcatccccggtccttctgccccacaagggggtcaaataacctttccac
tcctctccccatcactggcctcataactttggtcctctcccataggtcag
cgtgcagctaactctagagaagactcattgtccctgttggatggcagcaa
tgtctggggagtggaattggggtagcagagaccagaaggagaggggggga
gttggagcggggtgaggccaagtgtagaatcaggacacttacctatagcc
tggatccccaccagcattgctgcaaaggaggttggaggggacagagtgaa
ggataaatcagaggggaggggtcctttccccagtgcaggctcccagcctc
agtacagtgggaagcacccattcacagtcagattcttcacacctctgagt
cagaaaccccactgctggaatggactttgggaggaggctgggataagtta
caggtccctggggtgggtgggtccccaaatgtttgaccct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_4747645_4748357
seq2: B6Ng01-302D09.b_46_762

seq1  GAATTCACCCTCTTTGAAAAAGCATGTGTAGGGGCTAGAGGGAAGGCTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCCTCTTTGAAAAAGCATGTGTAGGGGCTAGAGGGAAGGCTCA  50

seq1  GCAGTTAAGCACTGGCTGCTCTTCCAGAGAGTTCTGACCTCATTTCTCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTAAGCACTGGCTGCTCTTCCAGAGAGTTCTGACCTCATTTCTCAG  100

seq1  TATTCAGCTTTGGATCACACCATCTATAATGGGATCTGATGCCCTCTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCAGCTTTGGATCACACCATCTATAATGGGATCTGATGCCCTCTTCT  150

seq1  GGCACACAGGTGTACATGCAGACTTAGGACTCAAATGAATGTAAAAAAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACACAGGTGTACATGCAGACTTAGGACTCAAATGAATGTAAAAAAGC  200

seq1  CAATGTGGTACATGCAGGAGGTCAGAGGAGGATGGTGTCCTGATTGTTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTGGTACATGCAGGAGGTCAGAGGAGGATGGTGTCCTGATTGTTCC  250

seq1  TTTTAAGACAGTCCCATTGAATTGGATTTAGGCTCGGAAGTCAGCAACCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAGACAGTCCCATTGAATTGGATTTAGGCTCGGAAGTCAGCAACCC  300

seq1  CCAGCTTGTCTCTGCCCACCTTTGTGCTGGGAGTACAGTACAGCTGTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTTGTCTCTGCCCACCTTTGTGCTGGGAGTACAGTACAGCTGTGTG  350

seq1  GCAGCATCTGGCTCTGTTGTCCATGAATCAGTTTGCACATGGGGAGGTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCATCTGGCTCTGTTGTCCATGAATCAGTTTGCACATGGGGAGGTCA  400

seq1  GAGGACAATACATGGTTTTATTCCTATACTTTTAGGTGGATTCTGGAGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGACAATACATGGTTTTATTCCTATACTTTTAGGTGGATTCTGGAGGT  450

seq1  CAAACTCAGGTTGCCAGCCTTGAGGGCAAGCTCCTTTTACTAAGCTTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTCAGGTTGCCAGCCTTGAGGGCAAGCTCCTTTTACTAAGCTTTTT  500

seq1  TTTGTTTTTCGAGACAGGGTTTCTCTGTGTAGCCCTGACTGTCCTGGAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTTTCGAGACAGGGTTTCTCTGTGTAGCCCTGACTGTCCTGGAAC  550

seq1  TCACTTTGTGGACCAGGCTGGCCTCCAACTCAGAAATCCA-CCTGCCTCT  599
      |||||||||||||||||||||||||||||||| ||||||| |||||||||
seq2  TCACTTTGTGGACCAGGCTGGCCTCCAACTCAAAAATCCACCCTGCCTCT  600

seq1  ACCTCCCAAGTGCTGGGATT-AAAGGTGTGTGCCACCACG-CCCTGCTTT  647
      |||||||||||||||||||| ||||||||||||||||||| |||||||||
seq2  ACCTCCCAAGTGCTGGGATTAAAAGGTGTGTGCCACCACGCCCCTGCTTT  650

seq1  CACTAAACTATCTTGTTAGTCCATGACTAGCTTTGTAAACAATTTTTTGT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAAACTATCTTGTTAGTCCATGACTAGCTTTGTAAACAATTTTTTGT  700

seq1  TTT-CTCAGTGTAACTC  713
      ||| |||||||||||||
seq2  TTTACTCAGTGTAACTC  717

seq1: chr7_4877871_4878366
seq2: B6Ng01-302D09.g_65_560 (reverse)

seq1  AGGGTCAGGCATCTGGGGCCCCACCCACCCCAGGGACCTGTAACTTATCC  50
      |||||||  ||| ||||| |||||||||||||||||||||||||||||||
seq2  AGGGTCAAACATTTGGGGACCCACCCACCCCAGGGACCTGTAACTTATCC  50

seq1  CAGCCTCCTCCCAAAGTCCATTCCAGCAGTGGGGTTTCTGACTCAGAGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTCCTCCCAAAGTCCATTCCAGCAGTGGGGTTTCTGACTCAGAGGT  100

seq1  GTGAGGAATCTGACTGTGAATGGGTGCTTCCCACTGTACTGAGGCTGGGA  150
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGAATCTGACTGTGAATGGGTGCTTCCCACTGTACTGAGGCTGGGA  150

seq1  GCCTGCACTGGGGAAAGGACCCCTCCCCTCTGATTTATCCTTCACTCTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCACTGGGGAAAGGACCCCTCCCCTCTGATTTATCCTTCACTCTGT  200

seq1  CCCCTCCAACCTCCTTTGCAGCAATGCTGGTGGGGATCCAGGCTATAGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCCAACCTCCTTTGCAGCAATGCTGGTGGGGATCCAGGCTATAGGT  250

seq1  AAGTGTCCTGATTCTACACTTGGCCTCACCCCGCTCCAACTCCCCCCCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTCCTGATTCTACACTTGGCCTCACCCCGCTCCAACTCCCCCCCTC  300

seq1  TCCTTCTGGTCTCTGCTACCCCAATTCCACTCCCCAGACATTGCTGCCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCTGGTCTCTGCTACCCCAATTCCACTCCCCAGACATTGCTGCCAT  350

seq1  CCAACAGGGACAATGAGTCTTCTCTAGAGTTAGCTGCACGCTGACCTATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACAGGGACAATGAGTCTTCTCTAGAGTTAGCTGCACGCTGACCTATG  400

seq1  GGAGAGGACCAAAGTTATGAGGCCAGTGATGGGGAGAGGAGTGGAAAGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGGACCAAAGTTATGAGGCCAGTGATGGGGAGAGGAGTGGAAAGGT  450

seq1  TATTTGACCCCCTTGTGGGGCAGAAGGACCGGGGATGCCTGAATTC  496
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGACCCCCTTGTGGGGCAGAAGGACCGGGGATGCCTGAATTC  496