BAC Information

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BAC

Clone NameB6Ng01-302P03
Chromosome7 (Build37)
Map Location 6,906,077 - 7,010,407
singlet/doubletdoublet
Overlap geneUsp29, Aurkc
Upstream geneLOC100041666, V1rd6, EG384525, EG269859, Nlrp4c, Zfp787, Zfp444, Galp, Zfp371, EG627821, Zfp667, Zfp583, LOC100042467, LOC100042459, Zfp78, Zfp28, LOC100042450, Olfr1344, GA_x5J8B7W3DQU-679632-679375, Olfr1336, Olfr1346, Olfr5, Olfr1347, Olfr1348, Olfr1349, LOC665328, Olfr1350, Zim2, Zim1, Peg3, LOC627961
Downstream geneLOC628030, LOC100041822, 5730403M16Rik, 2810409K11Rik, Vmn2r-ps35, Zfp418, BC023179, 6430701C03Rik, Clcn4-2, V2r15, LOC100041866, LOC100042577, Vmn2r31, Vmn2r-ps36, V2r5, LOC100041883, EG628117, Vmn2r33, LOC665470, EG665474, EG628368, LOC100042636, LOC665485, EG625353, Vmn2r-ps40, Vmn2r36, LOC638170, LOC100042662
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-302P03.bB6Ng01-302P03.g
ACCGA096866GA096867
length855926
definitionB6Ng01-302P03.b B6Ng01-302P03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,009,559 - 7,010,407)(6,906,077 - 6,906,995)
sequence
gaattcagctctttttcttttccttagtgttacacatcagatatggcagc
atcaccactggcattttggggtgttgttgttgttgctttggttggttggt
ttttcaagaaagggtttctctgtgtagcattggctgtcctggaatttgct
ctgttgtaatgaaatataatgtggtgaggggtgtctggtgggcccatgcc
aaagtgttccccctgagaaattatgccatgcaacagatctggtataacag
gggttattgagaggaaaggaaaagaataggacctggagaagggatagaga
cagacaaatggacatagagataggccaacagaagggagtagaggcatgag
ggcagagaagaggacggggcagagaacagaaaaggggagagtgagactgc
tggggagcatgtgtcaagagagaacagagagaactgtagtcgcaagcagt
ccttttatacatccttttaaatgatacagcatcatctaaacatcattaga
tgatgatgtgagccattgctaggtccctgggagagctagtggaatctctt
ataagctaacatctatagaccagactggcctagaactcacagagatccac
ctgcttctctgcctcacaagtgctgggtttaaaggcatatactaccatcc
agcttacccactggcttttatagagaaaggattcagagaaaaagatttca
agcagcagctgcccaggaaaacggaaatatctggaatcaagacagcatcc
tgcacgagtaccactaaactccttacacactgctttctccatcttccatc
cctgacagggtgtccaagacttcagagtgaattgttgttttgtttttgtt
ttttt
gaattcaaggccagcctggtctacagagtgagttcaagaacagccagggc
tacacagagaaaccctttctcattaaacaacaacaacaacaacaacaaac
aaacgaatgaacgaacaaacaaataaaaaacacgaacctggggctggaga
gatggctcagtggttaagagcactgactattcttccagaggtcctgagtt
caaatcccagcaaccacatggtggctcacaaccatctgtaattcaatcca
actccttcttctggtgtgttggaacacagaaacagtgtactcatacataa
aataaataaatctttaaaaacaagcaaacaaacttttacatgtatctgct
atcccaataaggtcttccctctcccttaggggtcttccttctacttcaaa
gccccttttaaaaaaatgtaaattctgtctatgaaaaagaatatgaaata
cttgtcatttggaatctggctgggcttgcttaaaatgagttccattccaa
attttcctgctaatgtaattttgttcttctttttggctggataaaactgt
cgtgttcacggacattcatgctcatttatctcttcacctgttttagcttt
ctgttcacctgtaggtgggcatctgggctcatcccacaacttggttttct
atagttctgtgaaaaccataggtgttcaggccctatgttgttccctgaca
ttgactccttcagataagcacccaggaggtatagttagggtcacacggta
gttctgtttgtaagttttctttttaatatgtattacattttatctagtta
atattattttcatttcatcttatttttatctatttacctattggggtttt
gttgttgtttacattttgtaatatatgtgtggtgttttgcctttgatttt
ggttttttggctttttaaaatatggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_7009559_7010407
seq2: B6Ng01-302P03.b_45_899 (reverse)

seq1  AAAAAAAC-AAAACAAAACAACAATTCACTCTGAAGTCTTGGACACCCTG  49
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAACAAAAACAAAACAACAATTCACTCTGAAGTCTTGGACACCCTG  50

seq1  TCAGGGATGGAAGATGGAG-AAGCAGTGTGTAAGGAG-TTAGTGGTACTC  97
      ||||||||||||||||||| ||||||||||||||||| ||||||||||||
seq2  TCAGGGATGGAAGATGGAGAAAGCAGTGTGTAAGGAGTTTAGTGGTACTC  100

seq1  GTGCA-GATGCTGTCCTGATTCCAGATATTTCCGTTTTCCTGGGCAGCTG  146
      ||||| ||||||||| ||||||||||||||||||||||||||||||||||
seq2  GTGCAGGATGCTGTCTTGATTCCAGATATTTCCGTTTTCCTGGGCAGCTG  150

seq1  CTGCTTG-AATCTTTTTCTCTGAATCCTTTCTCTATAAAAGCCAGT-GGT  194
      ||||||| |||||||||||||||||||||||||||||||||||||| |||
seq2  CTGCTTGAAATCTTTTTCTCTGAATCCTTTCTCTATAAAAGCCAGTGGGT  200

seq1  AAGCTGGATGGTAGTATATGCCTTTAAACCCAGCACTTGTGAGGCAGAGA  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGGATGGTAGTATATGCCTTTAAACCCAGCACTTGTGAGGCAGAGA  250

seq1  AGCAGGTGGATCTCTGTGAGTTCTAGGCCAGTCTGGTCTATAGATGTTAG  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGTGGATCTCTGTGAGTTCTAGGCCAGTCTGGTCTATAGATGTTAG  300

seq1  CTTATAAGAGATTCCACTAGCTCTCCCAGGGACCTAGCAATGGCTCACAT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATAAGAGATTCCACTAGCTCTCCCAGGGACCTAGCAATGGCTCACAT  350

seq1  CATCATCTAATGATGTTTAGATGATGCTGTATCATTTAAAAGGATGTATA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATCTAATGATGTTTAGATGATGCTGTATCATTTAAAAGGATGTATA  400

seq1  AAAGGACTGCTTGCGACTACAGTTCTCTCTGTTCTCTCTTGACACATGCT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGACTGCTTGCGACTACAGTTCTCTCTGTTCTCTCTTGACACATGCT  450

seq1  CCCCAGCAGTCTCACTCTCCCCTTTTCTGTTCTCTGCCCCGTCCTCTTCT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGCAGTCTCACTCTCCCCTTTTCTGTTCTCTGCCCCGTCCTCTTCT  500

seq1  CTGCCCTCATGCCTCTACTCCCTTCTGTTGGCCTATCTCTATGTCCATTT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCTCATGCCTCTACTCCCTTCTGTTGGCCTATCTCTATGTCCATTT  550

seq1  GTCTGTCTCTATCCCTTCTCCAGGTCCTATTCTTTTCCTTTCCTCTCAAT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTCTCTATCCCTTCTCCAGGTCCTATTCTTTTCCTTTCCTCTCAAT  600

seq1  AACCCCTGTTATACCAGATCTGTTGCATGGCATAATTTCTCAGGGGGAAC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCCTGTTATACCAGATCTGTTGCATGGCATAATTTCTCAGGGGGAAC  650

seq1  ACTTTGGCATGGGCCCACCAGACACCCCTCACCACATTATATTTCATTAC  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGGCATGGGCCCACCAGACACCCCTCACCACATTATATTTCATTAC  700

seq1  AACAGAGCAAATTCCAGGACAGCCAATGCTACACAGAGAAACCCTTTCTT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAGCAAATTCCAGGACAGCCAATGCTACACAGAGAAACCCTTTCTT  750

seq1  GAAAAACCAACCAACCAAAGCAACAACAACAACACCCCAAAATGCCAGTG  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAACCAACCAACCAAAGCAACAACAACAACACCCCAAAATGCCAGTG  800

seq1  GTGATGCTGCCATATCTGATGTGTAACACTAAGGAAAAGAAAAAGAGCTG  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGCTGCCATATCTGATGTGTAACACTAAGGAAAAGAAAAAGAGCTG  850

seq1  AATTC  849
      |||||
seq2  AATTC  855

seq1: chr7_6906077_6906995
seq2: B6Ng01-302P03.g_67_992

seq1  GAATTCAAGGCCAGCCTGGTCTACAGAGTGAGTTCAAGAACAGCCAGGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGGCCAGCCTGGTCTACAGAGTGAGTTCAAGAACAGCCAGGGC  50

seq1  TACACAGAGAAACCCTTTCTCATTAAACAACAACAACAACAACAACAAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAGAGAAACCCTTTCTCATTAAACAACAACAACAACAACAACAAAC  100

seq1  AAACGAATGAACGAACAAACAAATAAAAAACACGAACCTGGGGCTGGAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACGAATGAACGAACAAACAAATAAAAAACACGAACCTGGGGCTGGAGA  150

seq1  GATGGCTCAGTGGTTAAGAGCACTGACTATTCTTCCAGAGGTCCTGAGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCTCAGTGGTTAAGAGCACTGACTATTCTTCCAGAGGTCCTGAGTT  200

seq1  CAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATTCAATCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATTCAATCCA  250

seq1  ACTCCTTCTTCTGGTGTGTTGGAACACAGAAACAGTGTACTCATACATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTTCTTCTGGTGTGTTGGAACACAGAAACAGTGTACTCATACATAA  300

seq1  AATAAATAAATCTTTAAAAACAAGCAAACAAACTTTTACATGTATCTGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATAAATCTTTAAAAACAAGCAAACAAACTTTTACATGTATCTGCT  350

seq1  ATCCCAATAAGGTCTTCCCTCTCCCTTAGGGGTCTTCCTTCTACTTCAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCAATAAGGTCTTCCCTCTCCCTTAGGGGTCTTCCTTCTACTTCAAA  400

seq1  GCCCCTTTTAAAAAAATGTAAATTCTGTCTATGAAAAAGAATATGAAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCTTTTAAAAAAATGTAAATTCTGTCTATGAAAAAGAATATGAAATA  450

seq1  CTTGTCATTTGGAATCTGGCTGGGCTTGCTTAAAATGAGTTCCATTCCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTCATTTGGAATCTGGCTGGGCTTGCTTAAAATGAGTTCCATTCCAA  500

seq1  ATTTTCCTGCTAATGTAATTTTGTTCTTCTTTTTGGCTGGATAAAACTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCCTGCTAATGTAATTTTGTTCTTCTTTTTGGCTGGATAAAACTGT  550

seq1  CGTGTTCACGGACATTCATGCTCATTTATCTCTTCACCTGTTTTAGCTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTTCACGGACATTCATGCTCATTTATCTCTTCACCTGTTTTAGCTTT  600

seq1  CTGTTCACCTGTAGGTGGGCATCTGGGCTCATCCCACAACTTGGTTTTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCACCTGTAGGTGGGCATCTGGGCTCATCCCACAACTTGGTTTTCT  650

seq1  ATAGTTCTGTGAAAACCATAGGTGTTCAGGCCCTATGTTGTTCCCTGACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTCTGTGAAAACCATAGGTGTTCAGGCCCTATGTTGTTCCCTGACA  700

seq1  TTGACTCCTTCAGATAAGCACCCAGGAGGTATAG-TAGGGTCACACGGTA  749
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TTGACTCCTTCAGATAAGCACCCAGGAGGTATAGTTAGGGTCACACGGTA  750

seq1  GTTCTGTTTGTAAGTTTTCTTTTTAATATGTATTACATTTTATCTAGTTA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGTTTGTAAGTTTTCTTTTTAATATGTATTACATTTTATCTAGTTA  800

seq1  ATATTATTTTCAATTTCATCTTA-TTTTATCTATTTACCTATT-GGGTTT  847
      ||||||||||| ||||||||||| ||||||||||||||||||| ||||||
seq2  ATATTATTTTC-ATTTCATCTTATTTTTATCTATTTACCTATTGGGGTTT  849

seq1  TGTTGTTGTTTACATTTTGTAATATATGTGT-GTGTTT--GCTTTGATTT  894
      ||||||||||||||||||||||||||||||| ||||||   |||||||||
seq2  TGTTGTTGTTTACATTTTGTAATATATGTGTGGTGTTTTGCCTTTGATTT  899

seq1  TGGTTTTT--GTTTTTTAAGATATGGT  919
      ||||||||  | ||||||| |||||||
seq2  TGGTTTTTTGGCTTTTTAAAATATGGT  926