BAC Information

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BAC

Clone NameB6Ng01-303A03
Chromosome7 (Build37)14 (Build37)
Map Location 76,526,306 - 76,526,41177,598,751 - 77,599,884
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100041800, EG384639, Arrdc4, LOC384741
Downstream geneEG665410, Nr2f2, LOC100042833
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-303A03.bB6Ng01-303A03.g
ACCGA096914GA096915
length9301,140
definitionB6Ng01-303A03.b B6Ng01-303A03.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(76,526,306 - 76,526,411)(77,598,751 - 77,599,884)
sequence
gaattctgagctgaatccattttttttttttttttggttttttgttttgg
gttgaaaggcttttaattactgcttctacttctataggggatatggatct
gcttaaaatgcttcttgatttaactttggtgtaaaatcaaagtatatatc
aagaaaatcatctagggtttttttttttttttttaagtatatccttatga
ttctctaggtttcctcaatgtctgttgtaatgtcatctctaatttggatc
tttgatctttgttgtttaattaatttggctaagggtttttcagttttaca
tattttctcaaagagctaactttttgttcattgactgtcattttgtcgtg
gtggttatttgttcctgttttattgatctcttgctgtctatctgctcttt
tgaggtgttgtcttctcttatccttctttttaaaattattttttattttt
tattaggtattttcttcatttacatttccaatgctatcccaaaaggcccc
cataccctccccgcacttccctacccacccactcccacttcttggtcctg
gcgttcccctgtactgaggcatataaagtttgcaagaccaatgggcctct
ctttccaatgatggccaactaggccatcttctgatacatatgcagctaga
aacacgagctctgggggggaggtactggtaagttcatattgttgttccac
ctatagggttgcagccttagaataccaaagatatataagatgcaatttgc
aaaacccaggaaactcaagaagaacgaagaccaaagtgtggacactttgc
cccttcttagaattggaaacaaacacccatggaaggagttacagagacaa
agtttggagctgagatgaaaggatggaccatgtagagactgccacacccg
gggatccatcccatatcagcttccaaacgc
gaattctcttttgaaagttagcttgatatgagcctgaacaactcactgga
tgaaacagcttttactgcttttcagaaacactatgtacgatacatgtgcc
cttacttgacgccaggaacaaagagtgttccatctcagcgtggcagcaca
gccacacctaatgagcaagctttctggggaaattgtcgtaacttaagttc
ctattcaaacagttgttggacaaactcaagtgacacatagtatctggaaa
aatactttgtaccatttaaattaatacttttaaaatgtatttatttattc
tttgagtatttcacacaggtatgcaatacatgttgatcataatcaccacc
ccataccccggcatcccaacttcagcagaagtgaacattgtaatattcag
tctttattaagaacatggggacaacaaggacgccacatgaaagactgaac
atgaaaggacacgaagcaggtggttaactcaccctgccccaaaatgttct
cctgcacctcactcctgaaataccactttggcaagctttaaatgccacca
acttgaacttggatgaaccaagtgaactaaaaggtgtatttctaaagtca
gacctaagatactgaccaccaaatgcattcgctgccgcatcttgtgcttt
ccaatatcaaggcaacgatgtgtgtaataaagtcgagacacctccaggat
caggaatcagctttggaataataacttaaattggtatttctgctttccaa
ggtcctccatgtttcctctttccaggatgataatgggaatatacaccact
tctggacctaacggttctgaatgttaatggagactcacacatctcaagca
ttaagggcaacgacctgagactagtagccgaccagtctctccagccaagg
acaccactcactggcacaagtcacatactttaacataagtacatgtaata
acatattcaataaggaagggaaactaggctagaatttctaggatgatctc
tgagtaaacaatattgtgtcatcacaaaagctgtaatttggtggatatct
taatctatttggactttttattatttaagtcacatattatctaaatggtc
caattccactgagcacacagttggaaccctttaccacagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_76526306_76526411
seq2: B6Ng01-303A03.b_493_604

seq1  TATTAGGTATTTTCTTCATTTACATTTCCAGTGCTATCCCAAAAGTCCCC  50
      |||||||||||||||||||||||||||||| |||||||||||||| ||||
seq2  TATTAGGTATTTTCTTCATTTACATTTCCAATGCTATCCCAAAAGGCCCC  50

seq1  CATACCCT------TCTTCCCTACCCACCCACTCCCACTTTTTGGCCCTG  94
      ||||||||       ||||||||||||||||||||||||| |||| ||||
seq2  CATACCCTCCCCGCACTTCCCTACCCACCCACTCCCACTTCTTGGTCCTG  100

seq1  GCGTTCCCCTGT  106
      ||||||||||||
seq2  GCGTTCCCCTGT  112

seq1: chr14_77598751_77599884
seq2: B6Ng01-303A03.g_66_1205 (reverse)

seq1  GCTGTG--TAAGGGT--CCACTGTGTGCTCAGTGGGATTGGA-CATTTAG  45
      ||||||   ||||||  | |||||||||||||||| |||||| |||||||
seq2  GCTGTGGTAAAGGGTTCCAACTGTGTGCTCAGTGGAATTGGACCATTTAG  50

seq1  AT-ATATGTGGACTTTAAATAAT-AAAAGT-CAAATAGATTTAAGATATC  92
      || |||||| ||| ||||||||| |||||| |||||||| ||||||||||
seq2  ATAATATGT-GAC-TTAAATAATAAAAAGTCCAAATAGA-TTAAGATATC  97

seq1  CACC-AATTACAGCTTTTGTGATGACAC-ATATTGTTTACTCAGAAGATT  140
      |||| ||||||||||||||||||||||| ||||||||||||||| ||| |
seq2  CACCAAATTACAGCTTTTGTGATGACACAATATTGTTTACTCAG-AGA-T  145

seq1  CATCCTAGAAATTCTAGCCTAGTTT-CCTTCCTTATTGAATATGTTATTA  189
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CATCCTAGAAATTCTAGCCTAGTTTCCCTTCCTTATTGAATATGTTATTA  195

seq1  CATGTACTTATGTTAAAGTATGTGACTTGTGCCAGTGAGTGGTGTCCTTG  239
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTACTTATGTTAAAGTATGTGACTTGTGCCAGTGAGTGGTGTCCTTG  245

seq1  GCTGGAGAGACTGGTCGGCTACTAGTCTCAGGTCGTTGCCCTTAATGCTT  289
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGAGAGACTGGTCGGCTACTAGTCTCAGGTCGTTGCCCTTAATGCTT  295

seq1  GAGATGTGTGAGTCTCCATTAACATTCAGAACCGTTAGGTCCAGAAGTGG  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGTGTGAGTCTCCATTAACATTCAGAACCGTTAGGTCCAGAAGTGG  345

seq1  TGTATATTCCCATTATCATCCTGGAAAGAGGAAACATGGAGGACCTTGGA  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATATTCCCATTATCATCCTGGAAAGAGGAAACATGGAGGACCTTGGA  395

seq1  AAGCAGAAATACCAATTTAAGTTATTATTCCAAAGCTGATTCCTGATCCT  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGAAATACCAATTTAAGTTATTATTCCAAAGCTGATTCCTGATCCT  445

seq1  GGAGGTGTCTCGACTTTATTACACACATCGTTGCCTTGATATTGGAAAGC  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGTGTCTCGACTTTATTACACACATCGTTGCCTTGATATTGGAAAGC  495

seq1  ACAAGATGCGGCAGCGAATGCATTTGGTGGTCAGTATCTTAGGTCTGACT  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGATGCGGCAGCGAATGCATTTGGTGGTCAGTATCTTAGGTCTGACT  545

seq1  TTAGAAATACACCTTTTAGTTCACTTGGTTCATCCAAGTTCAAGTTGGTG  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAATACACCTTTTAGTTCACTTGGTTCATCCAAGTTCAAGTTGGTG  595

seq1  GCATTTAAAGCTTGCCAAAGTGGTATTTCAGGAGTGAGGTGCAGGAGAAC  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTAAAGCTTGCCAAAGTGGTATTTCAGGAGTGAGGTGCAGGAGAAC  645

seq1  ATTTTGGGGCAGGGTGAGTTAACCACCTGCTTCGTGTCCTTTCATGTTCA  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGGGGCAGGGTGAGTTAACCACCTGCTTCGTGTCCTTTCATGTTCA  695

seq1  GTCTTTCATGTGGCGTCCTTGTTGTCCCCATGTTCTTAATAAAGACTGAA  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTCATGTGGCGTCCTTGTTGTCCCCATGTTCTTAATAAAGACTGAA  745

seq1  TATTACAATGTTCACTTCTGCTGAAGTTGGGATGCCGGGGTATGGGGTGG  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTACAATGTTCACTTCTGCTGAAGTTGGGATGCCGGGGTATGGGGTGG  795

seq1  TGATTATGATCAACATGTATTGCATACCTGTGTGAAATACTCAAAGAATA  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTATGATCAACATGTATTGCATACCTGTGTGAAATACTCAAAGAATA  845

seq1  AATAAATACATTTTAAAAGTATTAATTTAAATGGTACAAAGTATTTTTCC  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATACATTTTAAAAGTATTAATTTAAATGGTACAAAGTATTTTTCC  895

seq1  AGATACTATGTGTCACTTGAGTTTGTCCAACAACTGTTTGAATAGGAACT  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATACTATGTGTCACTTGAGTTTGTCCAACAACTGTTTGAATAGGAACT  945

seq1  TAAGTTACGACAATTTCCCCAGAAAGCTTGCTCATTAGGTGTGGCTGTGC  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTACGACAATTTCCCCAGAAAGCTTGCTCATTAGGTGTGGCTGTGC  995

seq1  TGCCACGCTGAGATGGAACACTCTTTGTTCCTGGCGTCAAGTAAGGGCAC  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCACGCTGAGATGGAACACTCTTTGTTCCTGGCGTCAAGTAAGGGCAC  1045

seq1  ATGTATCGTACATAGTGTTTCTGAAAAGCAGTAAAAGCTGTTTCATCCAG  1089
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATCGTACATAGTGTTTCTGAAAAGCAGTAAAAGCTGTTTCATCCAG  1095

seq1  TGAGTTGTTCAGGCTCATATCAAGCTAACTTTCAAAAGAGAATTC  1134
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTGTTCAGGCTCATATCAAGCTAACTTTCAAAAGAGAATTC  1140