BAC Information

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BAC

Clone NameB6Ng01-303A20
Chromosome7 (Build37)
Map Location 29,645,744 - 29,646,798
singlet/doubletsinglet
Overlap genenone
Upstream gene4732475C15Rik, Prkcz2, 1700049G17Rik, EG668175, LOC100043771, Zfp780b, C130069I09Rik, LOC100043772, Psmc4, LOC100043774, 9530053A07Rik, Fbl, Dyrk1b, Eid2, LOC434156, BC089491, Dll3, Timm50, Supt5h, Rps16, Plekhg2, Zfp36, Ixl, Paf1, Samd4b, 1700085B13Rik, Gmfg, Lrfn1, LOC624672, 1700028B04Rik, EG330496, Il28, Sycn, 1190020J12Rik, Pak4, C330005M16Rik, Fbxo27, Fbxo17, Mrps12, Sars2, EG624918, Nfkbib, Sirt2, 5830482F20Rik, Hnrpl, Ech1, Lgals4
Downstream geneLgals7, Capn12, Actn4, Eif3s12, Map4k1, Ryr1, Rasgrp4, 1110006G06Rik, Spred3, Ggn, Psmd8, A230107C01Rik, Kcnk6, Yif1b, Spint2, Ppp1r14a, Neud4, Sipa1l3, LOC100043791, 4932431P20Rik, 4930432E11Rik, 1700067C01Rik, Zfp84, LOC100043794, Zfp30, EG625349, 6330581L23Rik, BC027344, Zfp420
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-303A20.bB6Ng01-303A20.g
ACCGA096946GA096947
length1,0231,063
definitionB6Ng01-303A20.b B6Ng01-303A20.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcactggttttaccatgttccccaccatccagaagcagctgtcctg
atagaaagatggaatggccttttgaagacggagttacagtgccaattagg
tgacagcagcatagatgggtggggcagggttcttcagaaggaggtatatg
ctttgaatcagtgtctgatctatggtacattttctcccatggccaggatc
caccagtccaagaatcaaggggtgggaaaggaaactgttccactcacttt
cacttctagagaccccctaggagagtttctgcttccgtccccacagccct
aggttctgcttgcctagaagttttggttccaatagggagagtgctcctgc
caggaggcacaacaaacattccattgaactggaaaatgtccccctgttca
ttttgggcttctactgcctttaaactaacaggctaagaaaggaataccag
tgttaggaggggtgatagatccagattaccatggggaaattggactgcct
ctccacaatggaggtaagaaggattatatctggagtgcaggagatccttt
agggcatctcttagtactaccatgtcctgtgattaaagtcaattggaacc
tacaacagcctaatccaagcaggatgacaaaggatgcagacccatcagaa
aggaaggaatgggtccctcctccaggaaaggagccaggatgtgctgcagt
gctggcagaggatggaggaaacacagaaaggagagtagaggaaggtatct
ataaatgcctgcaaaggccacatacagaaatgaagattacaagtggtatg
aatgcttctgttttattttgttaagaacacatttatggcagtggtggcac
acgcctttaatcccagcactcgggaggcagaggcagacagaagttctgag
ttcgagggccagtcctggtcctacgaagtgagtttccaggaacagccagg
gctacacagagatatccttgtctattatatatattgatttatatatatta
ctactaagtcatggattatatac
gaattcttggtcctactgctgcaacctcccaaatgctaggatgtgctgtg
ctatcacaactggttggtgcaatgctgaacccagagctttgtccacacta
gacaggtacaccggcatcgacagccccagctcagctgtggggactcaaaa
cccaaggctccactcgtcaatgttggtctgtcataatttttattattttt
ttgtacacagtggaaataatgaagtgaagctaggcatggtgatccatgcc
tttaagtccagctctggcgaggcagagacaggtatatctttgagtttgag
accagcctggacgatagaataagttccagcagagccagggtgaaacagag
aaattgtgtcttgaaacaaaacaacaaaaatagaaaaaggtaagaaagga
atgaagtgataatgatattgatgatctggtgaaaaacctgaactttaaag
attttaatttgattttggtttaagtgcgtgtctgcggagagatatatgca
tgcaagtgtaatgcctggggagacaaaaagagggcgtcagattacgggag
ctggaattacataggcttgtgagccctctgacagattgtgttggtgttta
ttttatgtgtatgggtggttttgcctgcatgtatatatgtgcaccatgtg
agtgcagtacctgaggaggtcagaagagggcgccaggtattctggtactg
gagttgctgacagtttctagtcacttgtggatcctgggaacagaacccga
gtcctctgggaagagcagcaagtgctcttagccattgacaccatctcttc
agcctccctcttttcttttatagatgaggtctccgctatagtgcaggtga
gccaggaactatcaaacctctttttcttagcctccccattgctggggtta
cagggttagggtctctgtacctgtatgaaaactaatgtttctaatggtga
ctatagtaagttgaacaactctagtctctgacaagggcaaggcctcttct
tgtagtgtcagctccatttatgaacttaattagtataaatcctactaatt
atttttaagccga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_29645744_29646798
seq2: B6Ng01-303A20.g_64_1126 (reverse)

seq1  TCCGCTT-AAAATAATTAGTA-GATTTTAATTAAATAAGTTCATAAATGG  48
      || |||| ||||||||||||| |||||  | ||| |||||||||||||||
seq2  TCGGCTTAAAAATAATTAGTAGGATTTATACTAATTAAGTTCATAAATGG  50

seq1  AGCTGAACACTACAAGAAGAGG-CTTGCCCTTGTCAGAGACTAGAG-TGT  96
      ||||| |||||||||||||||| ||||||||||||||||||||||| |||
seq2  AGCTG-ACACTACAAGAAGAGGCCTTGCCCTTGTCAGAGACTAGAGTTGT  99

seq1  TCAACTTACTATAGTCACCATTAGAAACATTAGTTTTCATACAGGTACAG  146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACTTACTATAGTCACCATTAGAAACATTAGTTTTCATACAGGTACAG  149

seq1  AGACCCTAA-CCTGTAACCCCAGCAATGGGGAGGCTAAG-AAAAGAGGTT  194
      ||||||||| ||||||||||||||||||||||||||||| ||||||||||
seq2  AGACCCTAACCCTGTAACCCCAGCAATGGGGAGGCTAAGAAAAAGAGGTT  199

seq1  TGATAGTTCCTGGCTCACCTGCACTATAGCGGAGACCTCATCTATAAAAG  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGTTCCTGGCTCACCTGCACTATAGCGGAGACCTCATCTATAAAAG  249

seq1  -AAAGA-GGAGGCTGAAGAGATGGTGTCAATGGCTAAGAGCACTTGCTGC  292
       ||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAGGGAGGCTGAAGAGATGGTGTCAATGGCTAAGAGCACTTGCTGC  299

seq1  TCTT-CCAGAGGACTCGGGTTCTGTTCCCAGGATCCACAAGTGACTAGAA  341
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCCAGAGGACTCGGGTTCTGTTCCCAGGATCCACAAGTGACTAGAA  349

seq1  ACTGTCAGCAACTCCAGTACCAGAATACCTGGCGCCCTCTTCTGACCTCC  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTCAGCAACTCCAGTACCAGAATACCTGGCGCCCTCTTCTGACCTCC  399

seq1  TCAGGTACTGCACTCACATGGTGCACATATATACATGCAGGCAAAACCAC  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTACTGCACTCACATGGTGCACATATATACATGCAGGCAAAACCAC  449

seq1  CCATACACATAAAATAAACACCAACACAATCTGTCAGAGGGCTCACAAGC  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATACACATAAAATAAACACCAACACAATCTGTCAGAGGGCTCACAAGC  499

seq1  CTATGTAATTCCAGCTCCCGTAATCTGACGCCCTCTTTTTGTCTCCCCAG  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGTAATTCCAGCTCCCGTAATCTGACGCCCTCTTTTTGTCTCCCCAG  549

seq1  GCATTACACTTGCATGCATATATCTCTCCGCAGACACGCACTTAAACCAA  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTACACTTGCATGCATATATCTCTCCGCAGACACGCACTTAAACCAA  599

seq1  AATCAAATTAAAATCTTTAAAGTTCAGGTTTTTCACCAGATCATCAATAT  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAAATTAAAATCTTTAAAGTTCAGGTTTTTCACCAGATCATCAATAT  649

seq1  CATTATCACTTCATTCCTTTCTTACCTTTTTCTATTTTTGTTGTTTTGTT  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATCACTTCATTCCTTTCTTACCTTTTTCTATTTTTGTTGTTTTGTT  699

seq1  TCAAGACACAATTTCTCTGTTTCACCCTGGCTCTGCTGGAACTTATTCTA  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGACACAATTTCTCTGTTTCACCCTGGCTCTGCTGGAACTTATTCTA  749

seq1  TCGTCCAGGCTGGTCTCAAACTCAAAGATATACCTGTCTCTGCCTCGCCA  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTCCAGGCTGGTCTCAAACTCAAAGATATACCTGTCTCTGCCTCGCCA  799

seq1  GAGCTGGACTTAAAGGCATGGATCACCATGCCTAGCTTCACTTCATTATT  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGGACTTAAAGGCATGGATCACCATGCCTAGCTTCACTTCATTATT  849

seq1  TCCACTGTGTACAAAAAAATAATAAAAATTATGACAGACCAACATTGACG  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTGTGTACAAAAAAATAATAAAAATTATGACAGACCAACATTGACG  899

seq1  AGTGGAGCCTTGGGTTTTGAGTCCCCACAGCTGAGCTGGGGCTGTCGATG  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGAGCCTTGGGTTTTGAGTCCCCACAGCTGAGCTGGGGCTGTCGATG  949

seq1  CCGGTGTACCTGTCTAGTGTGGACAAAGCTCTGGGTTCAGCATTGCACCA  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGTGTACCTGTCTAGTGTGGACAAAGCTCTGGGTTCAGCATTGCACCA  999

seq1  ACCAGTTGTGATAGCACAGCACATCCTAGCATTTGGGAGGTTGCAGCAGT  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGTTGTGATAGCACAGCACATCCTAGCATTTGGGAGGTTGCAGCAGT  1049

seq1  AGGACCAAGAATTC  1055
      ||||||||||||||
seq2  AGGACCAAGAATTC  1063