BAC Information

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BAC

Clone NameB6Ng01-303B11
Chromosome7 (Build37)
Map Location 50,847,391 - 50,989,069
singlet/doubletdoublet
Overlap geneZfp719, 4933405K07Rik, Ceacam18, Siglece, Atpbd3, Klk14, Klk13
Upstream geneEG637776, C330019L16Rik, EG434179, EG546965, LOC546964, LOC100039706, EG637572, LOC100039507, EG435975, LOC668606, EG668668, LOC100039543, LOC668612, LOC385199, LOC100039589, EG668620, Zfp715, Siglecf, Siglecg, LOC100039610, Lim2, Nkg7, Cldnd2, Etfb, 2210412E05Rik, A230106M20Rik, 4931406B18Rik, LOC668630, LOC100039946, Cd33, BC043301
Downstream geneKlk12, Klk11, Klk10, Klk9, Klk8, Klk7, Klk6, Klk5, Klk4, Klk2-ps, Klk15, Klk1b7-ps, Klk1b8, Klk1b1, Klk1b9, Klk1b10-ps, Klk1b11, LOC100039713, Klk1b26, Klk1b18-ps, Klk1b27, Klk1b14-ps, Klk1b15-ps, Klk1b21, Klk1b22, Klk1b16, Klk1b24, Klk1b3, Klk1b4, Klk1b5, Klk1, 1700028J19Rik, LOC668661, Acpt, LOC628854, EG638453, Clec11a, Shank1, 1700008O03Rik, Syt3, Lrrc4b, 0610012D14Rik, Josd2, 2310044H10Rik, 1700021P22Rik, Mybpc2, Spib, Pold1, Nr1h2, Napsa, Kcnc3, Myh14, 1700023D19Rik, Zfp473
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-303B11.bB6Ng01-303B11.g
ACCGA096976GA096977
length1,1001,096
definitionB6Ng01-303B11.b B6Ng01-303B11.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(50,987,970 - 50,989,069)(50,847,391 - 50,848,434)
sequence
gaattcctcttgtgtgggaagtgaatgaagtcctgggtgactgtgctatt
gacatgaacacagctgtctcaaggacctcaatgcctcagacccataggaa
taatgaaaccttccccagataaggctcagcaaaatgataatgcttcccct
tggtccttgtccagatgttgacagtgtgcaccgaaaatgtcaacaacatc
ttcctcctcccaggtgtttacaacctgagaccgcgcccatacagacacct
cccaactgagattagctaaacctgccttctggttcagctgtacatgacaa
acctattccctcgattgatatttataaaataaaatcactgagttttctgg
gttgctgttgttactgagtttccatcagagcgcaccatgggccacaccat
cccagctttcttgtatctgtgagtgtattttagttactgttctattgctg
tgaagagacactgtgatcaaggaaactttgataagaaagcatttaattgg
ggccctgcttagtttcagagggttagtccatgatcgctgtggcgggaagc
ttggtggctggcaggaaagcatggtgctggatcagtagcacatcctaatc
tgcaggcaggaggcagggagaggatgggtgctgagtgagcttaaaacccc
agtggctcatctcctcctaatctttcccaaacagttctactaactgggac
caaacattcaaatgtgtgagtctacggaggccattctcattggaaccatc
atgatgtgtgtcatttcttcattccctgtcaccccacttagtcctgtccc
taaaccaggcatgtagtgccatgctcacttaatgataaccaatacagaag
acgtctgccaccttcagaagatgtagtgatgtcacctgagccagttctgc
agtgggtgccagtggtctgttgcattagttgttgtattggtttacttttg
tcattgctgtgacattagtgacttgggggggaaggaatggtttattttgg
ctcatagttcaagggcatcacctgtcatgttggggagacatgtcacaggg
aacttgagtcttgggtcacctgcatctgaagtcagaattgggtgattact

gaattcactatatagaccagactggccttgaactcacagaattctgcctt
cctctacctcccaaggggttggattaaagatgtgcactagtatgcctggc
tggatagtaatatttttattttcattaatgaattactttacattctggtc
agaactttcccttctcaccttctttccctctttcctcctccttccttttc
tccttagaaaaggggaggcctccaatggatatcaacccaccttggcctat
caagttgcagtaggacaaggtgcatcatcttctattgaggctagacaagg
cagttcagttaggggaaaggggcccaaaggcaggcaactgaatcagagag
ctcctgttcctattgaaagcggttccacatgaataccaaactgcatatct
gttatatgtaggatgcctaggtccttcccatgcatgctctcttggtggtg
gttgagtctcagtgagcccctggctcaggttagttaattttgtagacttt
cttatagtgcccttgacttctctgactcctccagttcttcctccccctct
tctacaagatgatactaatatttttaaactttccttgtttctgtctatga
agggacagattgtgttgggcttgtccctaccatggtggccaacagacata
gcagctattttgacttcctaggcctctcaccagatttttttaccagtctc
ggattcctggacatcatcacctcagggtgccatttgagagagagatagaa
acccagaatattcatgaactggtacctgtgtctccacagtccgtttgtgc
tgctgtgattcatgttcttccagaacctcggaagatgtcctcatagaaat
ggcttctttgtaaaagtaactaggctgtaggcaaacttgggccagggttt
ggtcctaaatctgcttagtgatatgattaaagcccatgtgaaactcaaaa
aatttggaaggcaggatcatcaaggcagagatttggtgaatatacctcag
catggaatgttgatgactgttagcacagaaactaaaaagaaaaaaaaaaa
caaacaacataatttctttcttgggtgtttcaattgagccatccct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_50987970_50989069
seq2: B6Ng01-303B11.b_48_1147 (reverse)

seq1  AGTATTCACCCATTTCTGACTTCAGATGCAGGTGACCAAGGACCTCAAGT  50
      |||| ||||||| |||||||||||||||||||||||| | || |||||||
seq2  AGTAATCACCCAATTCTGACTTCAGATGCAGGTGACCCAAGA-CTCAAGT  49

seq1  TCCTGGTGACATGTCTTCCCCACCATGACAGGTGATGCCCTTGAACTATG  100
      |||  |||||||||| |||||| |||||||||||||||||||||||||||
seq2  TCCCTGTGACATGTC-TCCCCAACATGACAGGTGATGCCCTTGAACTATG  98

seq1  AGCCAAAATAAACCATTCCTT-CCCCCCAAGTCACTATTGTCACAGCAAT  149
      ||||||||||||||||||||| ||||||||||||||| ||||||||||||
seq2  AGCCAAAATAAACCATTCCTTCCCCCCCAAGTCACTAATGTCACAGCAAT  148

seq1  GACAAAAGT-AACCAATACAACAACTAATGCAACAGACCACTGGCACCCA  198
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GACAAAAGTAAACCAATACAACAACTAATGCAACAGACCACTGGCACCCA  198

seq1  CTGCAGAACTGGCTCAGGTGACATCACTACATCTTCTGAAGGTGGCAGAC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGAACTGGCTCAGGTGACATCACTACATCTTCTGAAGGTGGCAGAC  248

seq1  GTCTTCTGTATTGGTTATCATTAAGTGAGCATGGCACTACATGCCTGGTT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCTGTATTGGTTATCATTAAGTGAGCATGGCACTACATGCCTGGTT  298

seq1  TAGGGACAGGACTAAGTGGGGTGACAGGGAATGAAGAAATGACACACATC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGACAGGACTAAGTGGGGTGACAGGGAATGAAGAAATGACACACATC  348

seq1  ATGATGGTTCCAATGAGAATGGCCTCCGTAGACTCACACATTTGAATGTT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGGTTCCAATGAGAATGGCCTCCGTAGACTCACACATTTGAATGTT  398

seq1  TGGTCCCAGTTAGTAGAACTGTTTGGGAAAGATTAGGAGGAGATGAGCCA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCCCAGTTAGTAGAACTGTTTGGGAAAGATTAGGAGGAGATGAGCCA  448

seq1  CTGGGGTTTTAAGCTCACTCAGCACCCATCCTCTCCCTGCCTCCTGCCTG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGTTTTAAGCTCACTCAGCACCCATCCTCTCCCTGCCTCCTGCCTG  498

seq1  CAGATTAGGATGTGCTACTGATCCAGCACCATGCTTTCCTGCCAGCCACC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTAGGATGTGCTACTGATCCAGCACCATGCTTTCCTGCCAGCCACC  548

seq1  AAGCTTCCCGCCACAGCGATCATGGACTAACCCTCTGAAACTAAGCAGGG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTCCCGCCACAGCGATCATGGACTAACCCTCTGAAACTAAGCAGGG  598

seq1  CCCCAATTAAATGCTTTCTTATCAAAGTTTCCTTGATCACAGTGTCTCTT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAATTAAATGCTTTCTTATCAAAGTTTCCTTGATCACAGTGTCTCTT  648

seq1  CACAGCAATAGAACAGTAACTAAAATACACTCACAGATACAAGAAAGCTG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCAATAGAACAGTAACTAAAATACACTCACAGATACAAGAAAGCTG  698

seq1  GGATGGTGTGGCCCATGGTGCGCTCTGATGGAAACTCAGTAACAACAGCA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGTGTGGCCCATGGTGCGCTCTGATGGAAACTCAGTAACAACAGCA  748

seq1  ACCCAGAAAACTCAGTGATTTTATTTTATAAATATCAATCGAGGGAATAG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGAAAACTCAGTGATTTTATTTTATAAATATCAATCGAGGGAATAG  798

seq1  GTTTGTCATGTACAGCTGAACCAGAAGGCAGGTTTAGCTAATCTCAGTTG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTCATGTACAGCTGAACCAGAAGGCAGGTTTAGCTAATCTCAGTTG  848

seq1  GGAGGTGTCTGTATGGGCGCGGTCTCAGGTTGTAAACACCTGGGAGGAGG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGTGTCTGTATGGGCGCGGTCTCAGGTTGTAAACACCTGGGAGGAGG  898

seq1  AAGATGTTGTTGACATTTTCGGTGCACACTGTCAACATCTGGACAAGGAC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGTTGTTGACATTTTCGGTGCACACTGTCAACATCTGGACAAGGAC  948

seq1  CAAGGGGAAGCATTATCATTTTGCTGAGCCTTATCTGGGGAAGGTTTCAT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGGAAGCATTATCATTTTGCTGAGCCTTATCTGGGGAAGGTTTCAT  998

seq1  TATTCCTATGGGTCTGAGGCATTGAGGTCCTTGAGACAGCTGTGTTCATG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCCTATGGGTCTGAGGCATTGAGGTCCTTGAGACAGCTGTGTTCATG  1048

seq1  TCAATAGCACAGTCACCCAGGACTTCATTCACTTCCCACACAAGAGGAAT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATAGCACAGTCACCCAGGACTTCATTCACTTCCCACACAAGAGGAAT  1098

seq1  TC  1100
      ||
seq2  TC  1100

seq1: chr7_50847391_50848434
seq2: B6Ng01-303B11.g_131_1165

seq1  CAAGGGGTTGGATTAAAGATGTGCACTAGTATGCCTGGCTGGATAGTAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGGTTGGATTAAAGATGTGCACTAGTATGCCTGGCTGGATAGTAAT  50

seq1  ATTTTTATTTTCATTAATGAATTACTTTACATTCTGGTCAGAACTTTCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTATTTTCATTAATGAATTACTTTACATTCTGGTCAGAACTTTCCC  100

seq1  TTCTCACCTTCTTTCCCTCTTTCCTCCTCCTTCCTTTTCTCCTTAGAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCACCTTCTTTCCCTCTTTCCTCCTCCTTCCTTTTCTCCTTAGAAAA  150

seq1  GGGGAGGCCTCCAATGGATATCAACCCACCTTGGCCTATCAAGTTGCAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGGCCTCCAATGGATATCAACCCACCTTGGCCTATCAAGTTGCAGT  200

seq1  AGGACAAGGTGCATCATCTTCTATTGAGGCTAGACAAGGCAGTTCAGTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACAAGGTGCATCATCTTCTATTGAGGCTAGACAAGGCAGTTCAGTTA  250

seq1  GGGGAAAGGGGCCCAAAGGCAGGCAACTGAATCAGAGAGCTCCTGTTCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAAAGGGGCCCAAAGGCAGGCAACTGAATCAGAGAGCTCCTGTTCCT  300

seq1  ATTGAAAGCGGTTCCACATGAATACCAAACTGCATATCTGTTATATGTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAAGCGGTTCCACATGAATACCAAACTGCATATCTGTTATATGTAG  350

seq1  GATGCCTAGGTCCTTCCCATGCATGCTCTCTTGGTGGTGGTTGAGTCTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCCTAGGTCCTTCCCATGCATGCTCTCTTGGTGGTGGTTGAGTCTCA  400

seq1  GTGAGCCCCTGGCTCAGGTTAGTTAATTTTGTAGACTTTCTTATAGTGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGCCCCTGGCTCAGGTTAGTTAATTTTGTAGACTTTCTTATAGTGCC  450

seq1  CTTGACTTCTCTGACTCCTCCAGTTCTTCCTCCCCCTCTTCTACAAGATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGACTTCTCTGACTCCTCCAGTTCTTCCTCCCCCTCTTCTACAAGATG  500

seq1  ATACTAATATTTTTAAACTTTCCTTGTTTCTGTCTATGAAGGGACAGATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTAATATTTTTAAACTTTCCTTGTTTCTGTCTATGAAGGGACAGATT  550

seq1  GTGTTGGGCTTGTCCCTACCATGGTGGCCAACAGACATAGCAGCTATTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTGGGCTTGTCCCTACCATGGTGGCCAACAGACATAGCAGCTATTTT  600

seq1  GACTTCCTAGGCCTCTCACCAGATTTTTTTACCAGTCTCGGATTCCTGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCCTAGGCCTCTCACCAGATTTTTTTACCAGTCTCGGATTCCTGGA  650

seq1  CATCATCACCTCAGGGTGCCATTTGAGAGAGAGATAGAAACCCAGAATAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATCACCTCAGGGTGCCATTTGAGAGAGAGATAGAAACCCAGAATAT  700

seq1  TCATGAACTGGTACCTGTGTCTCCACAGTCCGTTTGTGCTGCTGTGATTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGAACTGGTACCTGTGTCTCCACAGTCCGTTTGTGCTGCTGTGATTC  750

seq1  ATGTTCTTCCAGAACCTCGGAAGATGTCCTCATAGAAATGGCTTCTTTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCTTCCAGAACCTCGGAAGATGTCCTCATAGAAATGGCTTCTTTGT  800

seq1  AAAAGTAACTAGGCTGTAGGCAAACTT-GGCCAGGG-TTGGTCCTAAATC  848
      ||||||||||||||||||||||||||| |||||||| |||||||||||||
seq2  AAAAGTAACTAGGCTGTAGGCAAACTTGGGCCAGGGTTTGGTCCTAAATC  850

seq1  TGCTTAGTGATATGATTAAAG-CCATGTGAAACTCAAAAAATTTGGAAGG  897
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TGCTTAGTGATATGATTAAAGCCCATGTGAAACTCAAAAAATTTGGAAGG  900

seq1  CAGGATCATCAAGGCAGAGATTTTGGTG-ATATACCTCCAAGCCATGGAA  946
      |||||||||||||||||||| ||||||| |||||||||  || |||||||
seq2  CAGGATCATCAAGGCAGAGA-TTTGGTGAATATACCTC--AG-CATGGAA  946

seq1  TGTTGATGACTGTTAGCAACAGAAACTAAAAAAGAAAAAAAAAAAACAAA  996
      ||||||||||||||||| ||||||||| |||||||||||||||||   ||
seq2  TGTTGATGACTGTTAGC-ACAGAAACT-AAAAAGAAAAAAAAAAA--CAA  992

seq1  ACAAAACAATATTTTCTTCCTTGGGTGTTTCCAAAATGAGCCATCCCT  1044
      ||||    ||| |||||| ||||||||||||  || ||||||||||||
seq2  ACAA---CATAATTTCTTTCTTGGGTGTTTC--AATTGAGCCATCCCT  1035