BAC Information

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BAC

Clone NameB6Ng01-303C10
Chromosome7 (Build37)
Map Location 50,444,998 - 50,445,264
singlet/doubletsinglet
Overlap geneEG668620
Upstream geneEG637898, Gprc2a-rs2, LOC434177, Vmn2r-ps60, 4933421I07Rik, LOC628503, BC063263, LOC100039449, EG637776, C330019L16Rik, EG434179, EG546965, LOC546964, LOC100039706, EG637572, LOC100039507, EG435975, LOC668606, EG668668, LOC100039543, LOC668612, LOC385199, LOC100039589
Downstream geneZfp715, Siglecf, Siglecg, LOC100039610, Lim2, Nkg7, Cldnd2, Etfb, 2210412E05Rik, A230106M20Rik, 4931406B18Rik, LOC668630, LOC100039946, Cd33, BC043301, Zfp719, 4933405K07Rik, Ceacam18, Siglece, Atpbd3, Klk14, Klk13, Klk12, Klk11, Klk10, Klk9, Klk8, Klk7, Klk6, Klk5, Klk4, Klk2-ps, Klk15, Klk1b7-ps, Klk1b8, Klk1b1, Klk1b9, Klk1b10-ps, Klk1b11, LOC100039713, Klk1b26, Klk1b18-ps, Klk1b27, Klk1b14-ps, Klk1b15-ps, Klk1b21, Klk1b22, Klk1b16, Klk1b24
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-303C10.bB6Ng01-303C10.g
ACCGA097022GA097023
length1,141967
definitionB6Ng01-303C10.b B6Ng01-303C10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctaccagaccttcaaagaagaattaacaccaatacttctcaaatg
atttcacaaagaagaaactaaaggaacattgcctaattcttttttttttt
taaggccacaattattctgttacctaaaccacacaaagacccaaaaaaga
aagaaaatcagagaccaattttccttaaaaacatagatgcaaatttctca
ataaaatacttgtaaagtgaatccaagaacaaatcatcaaagagattatc
tactatgttcaaatgagattcatcccagagatataggtatggttcaacat
atataaattcataaatgtaaaataccacataaacagactgaaggacagaa
aaaaaatcacatgatcactttcattagatgcagaaaaggcttttgacaaa
tataacaccccttcatgatggagagattagggatataaggaacaaaccct
caacataataaaagcaatttacaggaagcccacaaccaatatcaacataa
acacagagaaactcaaagcatttacactaaaatcagggataaaacaagga
tatccactttctccatattcaatatagtacttgaagtcttagaaacaaca
agacaattgaaggagaccaaggagctacaagtaggaaagtcaaagtatcc
ttatttgcagatgatataattttatatacaaataaccctaaaaactctgc
caggaaacttctacatctactgtacttttagcaaaatagcaggagagaaa
atttatacacaaaaatctaaactttcatgtatataaatgacaaacaagga
atcaggaaaacaatacctttcacaatagccaaaaaaacaatcaaccaaac
aaccaacccaaaaaaaaaaaaaaaaaaaaaaaaaacccttggcatactct
aagaaatacaaatgaaagacttaaaataatataaaccttaagaaccaaaa
aaaaaaaaataaagaggaggccagggcgggttagtgccacgccctttatt
ccagcactcagagcagagcagccagattctgattcagcaggctgtctaca
agtgagtcaggacaggcagcctataccagaaatctgtcctgaaccaatca
ctatcaactgcacatctaagaccttaggaggattttaggga
gaattctttcatgttttttaagatcactctgacatgtaaaggatttacca
cattgattacattcatagggtttctctccagtatgtattcttttatgtac
ttgaagataaccagaatatgcaaaggctttaccacaatgattacattcat
agggtttctctccagtatgtattattttatggatttgaagagaattgtgt
tgtgtaaaggttttaccacattgattacatttgtaaggcttctcgccagt
gtgaattctcccatgtctttgaagttgactatgatgtgcaaaggctttat
tacattgcttacatttataaggtttctctccagtgtgtgttgctttgtgt
atatggagactggtgtaatacccaaaggctttaccacactcattacattt
gtaagacttctctccagtatgaattctttcatgtcttttacattcacgaa
tgcatggaaaggctttaccacactgattacatttgtaaggtttctctcca
gtatgtttccttttctgtacttgtagataaccagggtatgcaaaaacttt
accacattgattacattcatagggtttctctccagtatgtattcttttat
gcccttgtagataactttgccgtgcaaaggctttaccacattgattacat
ttgtaaggtttctctccagtatgtgttcttttatgcacttgcagatgact
ctgtagtctaaaggctttaccacattgattacattcatagggtttctctc
cagtatgtattcttttatgtgttttaagattactgtgttgggaataggct
ttaccacattgattacatttatagggtttctctccagtatgtgttctttt
atgttttgggagagaactgcgataggcaaatgttttaccacattcattac
atttataaggcttctctccagtatgaattttttcatgtcttttaagtcta
tgaagatgtggaaaagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_50444998_50445264
seq2: B6Ng01-303C10.g_381_647 (reverse)

seq1  GAGAGAAACCCTATGAATGTAATCAATGTGGTAAAGCCTTTTTACAT--C  48
      ||||||||||||||||||||||||||||||||||||  ||||| |||  |
seq2  GAGAGAAACCCTATGAATGTAATCAATGTGGTAAAG--TTTTTGCATACC  48

seq1  TCAACTATCTTAGAATTCATGAAAGAACACATACTGGAGAGAAACCTTAC  98
           |||||   | | ||  |||| | ||||||||||||||||||||||
seq2  CTGGTTATCTACAAGTACAGAAAAGGAAACATACTGGAGAGAAACCTTAC  98

seq1  CAATGTAATCAATGTGGTAAAGCCTTTACACAAAGGAGTCATCTTCAAAG  148
       |||||||||| ||||||||||||||| ||   |   || |   | ||||
seq2  AAATGTAATCAGTGTGGTAAAGCCTTTCCATGCATTCGTGAATGTAAAAG  148

seq1  ACATAAAGTAGTACATACTGGAGTGAGACCCTACATATGTAATCAGTGTA  198
      |||| ||  | | |||||||||| ||   | |||| ||||||| ||||| 
seq2  ACATGAAAGAATTCATACTGGAGAGAAGTCTTACAAATGTAATGAGTGTG  198

seq1  ATAAAGCCT-----ACCCACAGCAGAATTATCTCCGAAAACATGAAAGAA  243
       ||||||||         ||| |||     |||||  | |||  ||  ||
seq2  GTAAAGCCTTTGGGTATTACACCAG-----TCTCCATATACACAAAGCAA  243

seq1  CACATACTGGAGAGAAACCTTATA  267
      |||| |||||||||||||||||||
seq2  CACACACTGGAGAGAAACCTTATA  267