BAC Information

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BAC

Clone NameB6Ng01-303J06
Chromosome7 (Build37)
Map Location 65,715,341 - 65,716,414
singlet/doubletsinglet
Overlap genenone
Upstream geneGabra5, Gabrb3, EG668807, LOC434189
Downstream geneAtp10a, LOC621446, LOC668811, LOC668813, LOC668815, EG668818, Ube3a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-303J06.bB6Ng01-303J06.g
ACCGA097345GA097346
length1,1561,064
definitionB6Ng01-303J06.b B6Ng01-303J06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttattggggttatttgatt
ttctgaagtccaccttcttaagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaatgatactttcccaatctgttggtggtct
ttttgtcttactgacagtgtcttttgccttgcagaaaatttggagtttca
ttaggtcccatttgtcaattctcgatcttacagtacaagccattactgtt
ctgttcagaaatttttcccctgtgcctatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tctacttagatttgaccttagtacaaggagataagtatgtatcgattcac
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggctcatttctgggtcttcaattctattccattgg
tctacttgtctgtcattataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcttaggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttgaaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcttgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagatttgaaggttttatcata
cagatctttcacttccttagttagagtcacgccaaggtatttatattatt
tgtgaccattgagaagggtgttggtttccctaatttcattctcagcctgt
ttattctttgtatagagaaaggcccattgacttgtttgagtttattttta
ttattcaagctacttcaccggagctgtttatcagttttagaagttctcct
ggtgagtttttaaggttccacttatatttacgtatctatactgtatctgg
cataga
gaattccagtttatggatactacatatttcttcagagagtgatttctgtc
ttcactgctacaactctgaagtggacttcatatttattgtggagtaaaag
ttcacctaatgcagcctttgctgaaagtgtcagttctacacttttattta
gtaaatgagtttcacaatcagttctcatgcaaaccttggtcagaaggaaa
atgacctttagatatttatgatgtttactactcaggtgagtatctggtct
catactaacagttataaaagtgcttgagtgccaccactttataagagctg
ggaataaggcctatgcccctcgggaagggtcagagtaaaggcacacacta
agtactaagaagccacttagatggaatgcacttatattcttttttctatc
tttttttttttttttaagatttatttatttattatatgtaagtacactgt
agctgtcttcagacactccagaagagggcgccagatctcattacggatgg
ttgtgagccaccatgtggttgctgggatttgaactccagaccttcggaag
agcagtcgggtgctcttacccactgagccatctcaccagcccctctatct
ttttttaattgcatattttatttatttacattttaactgttatccccttt
tccaatcccctcttcccctggaaactccctatcccatgccccctcctcct
gcttctatgagggtatgccccccgcccgctcacccactccctcctcccca
ccctcacatttccctatactggggcactgagccttcataggacaagggcc
tcttctcccattgatggctgacaagggcatcccctgctacatatacgctg
gagccatgggtccctccatgtacacgtatgtctaatgtatgggcctgtgt
agaatatgtttcctccaaattctttagtgagattctgttttccttgagtc
atcagactgtcagactcttttggcgacttcatcatttctggaccaaaagt
ccttacctgtttgacttttttattaaaaaagaaacgggtgggtgctaagg
ctagtatgcaatac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_65715341_65716414
seq2: B6Ng01-303J06.g_69_1132 (reverse)

seq1  GTATTGCTTTCCTAGCCTT-GCCCCCACCCCCTTTTCTTTTTTTAATAAA  49
      |||||||  | |||||||| || ||||  ||| |||| ||||||||||||
seq2  GTATTGC-ATACTAGCCTTAGCACCCA--CCCGTTTC-TTTTTTAATAAA  46

seq1  AATGTCCAAACAGTTAAGACTTTTTGGTCCAG-AATGATGAAGTCGCCAA  98
      || || ||||||| ||||   ||||||||||| |||||||||||||||||
seq2  AAAGT-CAAACAGGTAAGGACTTTTGGTCCAGAAATGATGAAGTCGCCAA  95

seq1  AAGGAGTCTTGACAGTCTGGATGACACAAGGAAAAACAGAATCTCACTAA  148
      || ||||| ||||||||| |||||| ||||| ||||||||||||||||||
seq2  AA-GAGTC-TGACAGTCT-GATGACTCAAGG-AAAACAGAATCTCACTAA  141

seq1  AGATTTTGGAGGAAACATATTCTACACAGGCCCATACATTAGAACATACG  198
      ||| |||||||||||||||||||||||||||||||||||||| |||||||
seq2  AGAATTTGGAGGAAACATATTCTACACAGGCCCATACATTAG-ACATACG  190

seq1  TGTACATGGAGGGACCCATGGCTCCAGCCGTATATGTAGCAGGGGATGGC  248
      ||||||||||||||||||||||||||| |||||||||||||||||||| |
seq2  TGTACATGGAGGGACCCATGGCTCCAG-CGTATATGTAGCAGGGGATGCC  239

seq1  CTTGTCAGGCATCAATGGGAGAAGAGGCCCTTTGTCCTATGAAGGCTCAG  298
      |||||||| ||||||||||||||||||||| |||||||||||||||||||
seq2  CTTGTCAGCCATCAATGGGAGAAGAGGCCC-TTGTCCTATGAAGGCTCAG  288

seq1  TGCCCCAGTATAGGGAAATGTGAGGGTGGGGAGGAGGGAGTGGGTGAGCG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCCAGTATAGGGAAATGTGAGGGTGGGGAGGAGGGAGTGGGTGAGCG  338

seq1  GGCGGGGGGCATACCCTCATAGAAGCAGGAGGAGGGGGCATGGGATAGGG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGGGGGGCATACCCTCATAGAAGCAGGAGGAGGGGGCATGGGATAGGG  388

seq1  AGTTTCCAGGGGAAGAGGGGATTGGAAAAGGGGATAACAGTTAAAATGTA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCCAGGGGAAGAGGGGATTGGAAAAGGGGATAACAGTTAAAATGTA  438

seq1  AATAAATAAAATATGCAATTAAAAAAAGATAGAGGGGCTGGTGAGATGGC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATAAAATATGCAATTAAAAAAAGATAGAGGGGCTGGTGAGATGGC  488

seq1  TCAGTGGGTAAGAGCACCCGACTGCTCTTCCGAAGGTCTGGAGTTCAAAT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGGGTAAGAGCACCCGACTGCTCTTCCGAAGGTCTGGAGTTCAAAT  538

seq1  CCCAGCAACCACATGGTGGCTCACAACCATCCGTAATGAGATCTGGCGCC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCAACCACATGGTGGCTCACAACCATCCGTAATGAGATCTGGCGCC  588

seq1  CTCTTCTGGAGTGTCTGAAGACAGCTACAGTGTACTTACATATAATAAAT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCTGGAGTGTCTGAAGACAGCTACAGTGTACTTACATATAATAAAT  638

seq1  AAATAAATCTTAAAAAAAAAAAAAAAGATAGAAAAAAGAATATAAGTGCA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAATCTTAAAAAAAAAAAAAAAGATAGAAAAAAGAATATAAGTGCA  688

seq1  TTCCATCTAAGTGGCTTCTTAGTACTTAGTGTGTGCCTTTACTCTGACCC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATCTAAGTGGCTTCTTAGTACTTAGTGTGTGCCTTTACTCTGACCC  738

seq1  TTCCCGAGGGGCATAGGCCTTATTCCCAGCTCTTATAAAGTGGTGGCACT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCGAGGGGCATAGGCCTTATTCCCAGCTCTTATAAAGTGGTGGCACT  788

seq1  CAAGCACTTTTATAACTGTTAGTATGAGACCAGATACTCACCTGAGTAGT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCACTTTTATAACTGTTAGTATGAGACCAGATACTCACCTGAGTAGT  838

seq1  AAACATCATAAATATCTAAAGGTCATTTTCCTTCTGACCAAGGTTTGCAT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATCATAAATATCTAAAGGTCATTTTCCTTCTGACCAAGGTTTGCAT  888

seq1  GAGAACTGATTGTGAAACTCATTTACTAAATAAAAGTGTAGAACTGACAC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACTGATTGTGAAACTCATTTACTAAATAAAAGTGTAGAACTGACAC  938

seq1  TTTCAGCAAAGGCTGCATTAGGTGAACTTTTACTCCACAATAAATATGAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGCAAAGGCTGCATTAGGTGAACTTTTACTCCACAATAAATATGAA  988

seq1  GTCCACTTCAGAGTTGTAGCAGTGAAGACAGAAATCACTCTCTGAAGAAA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCACTTCAGAGTTGTAGCAGTGAAGACAGAAATCACTCTCTGAAGAAA  1038

seq1  TATGTAGTATCCATAAACTGGAATTC  1074
      ||||||||||||||||||||||||||
seq2  TATGTAGTATCCATAAACTGGAATTC  1064