BAC Information

Click to search

BAC

Clone NameB6Ng01-304D13
Chromosome7 (Build37)
Map Location 121,733,417 - 121,734,544
singlet/doubletsinglet
Overlap genenone
Upstream geneEG434228, Spon1, Rras2, LOC668451, Copb1, Psma1, 4933406I18Rik, Pde3b, Cyp2r1
Downstream geneCalca, LOC100043295, Calcb, Insc, EG627967, LOC668472, Sox6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-304D13.bB6Ng01-304D13.g
ACCGA097831GA097832
length1,1111,154
definitionB6Ng01-304D13.b B6Ng01-304D13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatatctaacattgctaaggtgggcaaaaacctgagaccagatag
attatgggccctagtagaaaacttactgttattcttcaaaaagaatataa
aagtaaatgactgctaataacatattattataaccatagatcacagcgta
gttcgtctcatcagagaagcttcttgctgtagatagtaattaatgcagag
actcacaactggacaatgtgcagagagtgacggacttcagtgattgtgtg
gattgtatgaccacattttgtaatcaagacttctctaccactaaacacaa
ttaagaataaaaacatcaaaattgcgtagtattagtttgataatattacc
ttcctaattgtctatggccagctgagtaacagataatacaaagcagactt
tattctctatcattgcttttgcctgccactcacctgcaccctaatgtaat
ccttagcagatgtgtttataaaatctgagtaattttactcctagcctaag
caatacactagtggaattgaaggtaaattctgtaatgttggacagaagaa
atgactgtcacacctaccactgtttctatctattaacatgtgtagtttcc
cggtggctatggcaatgagttgattagtagataaaacagggaagtaatcg
tgccatccatgaaatcacatgccattgctatggggtgccacggaccgggc
ccagtcgacctccctcaatctgtgggaatcaggggttccggcagatgggc
atagagtcagcgggaatggggtgacaaacagacttgacacaggggagtgt
ggatctgaatgtaatgtcaaattgagcatcaaactttttatacagaagaa
aataggaaagttaggtgacatatcagcaaggtacaaatgaggttaccgga
tgcttaatgactctaacacaaacagaggaatgcaagcacaaagactggca
ggaactgggcaataaacaactgagacaaagtcagctatatctcagaagcc
aggtgtgaggtctttacacttcaggcaagggcttcacacccaagtcatgt
ctataggagttcagctctagctaacatctcatgataatgcatactctaac
acaaccgatct
gaattctccttaaaaagggacggggtttcgttttctccctctcttgcttc
ttgctctcttgcttcttgctctcttgcttcttacactcctgctcctgaag
atgtaagcaataaagctttgccgcagaagattctggtttgttgcgtcttt
cctggccggtcgtgagaacgcgtctaataacaattggtgccgaattccgg
gacgagaaaaaactcgggactggcgcaaggaagatccctcattccagaac
cagaactgcgggtcgcggtaataaaggttcccgtaaagcagactgttaag
aaggattcaactgtatgaattcagaacttttcagctggggaacgagagta
ccagtgagtacagctttacgaggtaagtctgatcttgaactttctaagga
aattcaagacagtctatcagaagtaaagtggaatatgtttggccttgaat
tttttctggtgttaggagcccttttgttccttttcacatgttatcaagtg
attaagatagggctgaaaattctagaggaaattcaggacaagctatcaga
agtaaagcggggagagagagtaggaacaaagaggaaatatggtacacaaa
ataagtatacaggcctttccaagggtcttgaacccgaggaaaagttaagg
ttaggtaggaatacctggagagagattagaagaaaaagaggaaaaaggga
aaagaagaaagatcaattagcggaggtctctaggaaaaggagcctgtgct
catcgctggatgggctcggggagccagctcttagtagctctgaagcagat
gaagaattctcctctgaagaaacagactgggaggaagaagcagctcatta
tgagaaaaaagggtaccagccaggtaagtgctagctaatcagttaaggaa
gcccaaagcggctggcgaaggccagttgctgattgggcctcaggcagtcg
gcttcaagggtcggccctatgcggagtccccgccctgcgtagttgcgtca
gccctgcgcagagaggcagtgcgcagactcatcatccagagaggtacaag
gaaatacacaggcatttccgtctttgagactgagggtgggccgtgtccca
cgctcggtagaatctacaataaggatgccgtgagtcggtccgtaaaatat
cggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_121733417_121734544
seq2: B6Ng01-304D13.b_46_1156 (reverse)

seq1  AGATCGGGTTGTGGTTTTAGAGTATTGCATTATTCATGAGATGGTTAGCT  50
      ||||| |||||||   |||||||| ||||||| ||||||||| |||||||
seq2  AGATC-GGTTGTG---TTAGAGTA-TGCATTA-TCATGAGAT-GTTAGCT  43

seq1  AGAGCTGAACTCCCTAATTAGAACCATGACTTGGGTGTGAAAGCCCTTGC  100
      ||||||||||| ||||  ||||  ||||||||||||||| ||||||||| 
seq2  AGAGCTGAACT-CCTA--TAGA--CATGACTTGGGTGTG-AAGCCCTTG-  86

seq1  CCTGGAGTGTAAAGACCTCACACCTGGCTTCTGAGAATATAGCTGACTTT  150
      |||| |||||||||||||||||||||||||||||| ||||||||||||||
seq2  CCTGAAGTGTAAAGACCTCACACCTGGCTTCTGAG-ATATAGCTGACTTT  135

seq1  GTCTCAGTTGTTTTATTGCCCAGTTCCTGCCAGTCTTTGTGCTTGCATTC  200
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GTCTCAGTTG-TTTATTGCCCAGTTCCTGCCAGTCTTTGTGCTTGCATTC  184

seq1  CTCTGTTTTGTGTTAGAGTCATTAAGCATCCGGTAACCTCATTTGTACCT  250
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTG-TTTGTGTTAGAGTCATTAAGCATCCGGTAACCTCATTTGTACCT  233

seq1  TGCTGATATGTCACCTAACTTTCCTATTTTCTTCTGTATAAAAAGTTTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGATATGTCACCTAACTTTCCTATTTTCTTCTGTATAAAAAGTTTGA  283

seq1  TGCTCAATTTGACATTACATTCAGATCCACACTCCCCTGTGTCAAGTCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCAATTTGACATTACATTCAGATCCACACTCCCCTGTGTCAAGTCTG  333

seq1  TTTGTCACCCCATTCCCGCTGACTCTATGCCCATCTGCCGGAACCCCTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCACCCCATTCCCGCTGACTCTATGCCCATCTGCCGGAACCCCTGA  383

seq1  TTCCCACAGATTGAGGGAGGTCGACTGGGCCCGGTCCGTGGCACCCCATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCACAGATTGAGGGAGGTCGACTGGGCCCGGTCCGTGGCACCCCATA  433

seq1  GCAATGGCATGTGATTTCATGGATGGCACGATTACTTCCCTGTTTTATCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATGGCATGTGATTTCATGGATGGCACGATTACTTCCCTGTTTTATCT  483

seq1  ACTAATCAACTCATTGCCATAGCCACCGGGAAACTACACATGTTAATAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATCAACTCATTGCCATAGCCACCGGGAAACTACACATGTTAATAGA  533

seq1  TAGAAACAGTGGTAGGTGTGACAGTCATTTCTTCTGTCCAACATTACAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAACAGTGGTAGGTGTGACAGTCATTTCTTCTGTCCAACATTACAGA  583

seq1  ATTTACCTTCAATTCCACTAGTGTATTGCTTAGGCTAGGAGTAAAATTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACCTTCAATTCCACTAGTGTATTGCTTAGGCTAGGAGTAAAATTAC  633

seq1  TCAGATTTTATAAACACATCTGCTAAGGATTACATTAGGGTGCAGGTGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATTTTATAAACACATCTGCTAAGGATTACATTAGGGTGCAGGTGAG  683

seq1  TGGCAGGCAAAAGCAATGATAGAGAATAAAGTCTGCTTTGTATTATCTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGGCAAAAGCAATGATAGAGAATAAAGTCTGCTTTGTATTATCTGT  733

seq1  TACTCAGCTGGCCATAGACAATTAGGAAGGTAATATTATCAAACTAATAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCAGCTGGCCATAGACAATTAGGAAGGTAATATTATCAAACTAATAC  783

seq1  TACGCAATTTTGATGTTTTTATTCTTAATTGTGTTTAGTGGTAGAGAAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGCAATTTTGATGTTTTTATTCTTAATTGTGTTTAGTGGTAGAGAAGT  833

seq1  CTTGATTACAAAATGTGGTCATACAATCCACACAATCACTGAAGTCCGTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATTACAAAATGTGGTCATACAATCCACACAATCACTGAAGTCCGTC  883

seq1  ACTCTCTGCACATTGTCCAGTTGTGAGTCTCTGCATTAATTACTATCTAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCTGCACATTGTCCAGTTGTGAGTCTCTGCATTAATTACTATCTAC  933

seq1  AGCAAGAAGCTTCTCTGATGAGACGAACTACGCTGTGATCTATGGTTATA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGAAGCTTCTCTGATGAGACGAACTACGCTGTGATCTATGGTTATA  983

seq1  ATAATATGTTATTAGCAGTCATTTACTTTTATATTCTTTTTGAAGAATAA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATATGTTATTAGCAGTCATTTACTTTTATATTCTTTTTGAAGAATAA  1033

seq1  CAGTAAGTTTTCTACTAGGGCCCATAATCTATCTGGTCTCAGGTTTTTGC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAAGTTTTCTACTAGGGCCCATAATCTATCTGGTCTCAGGTTTTTGC  1083

seq1  CCACCTTAGCAATGTTAGATATGAATTC  1128
      ||||||||||||||||||||||||||||
seq2  CCACCTTAGCAATGTTAGATATGAATTC  1111