BAC Information

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BAC

Clone NameB6Ng01-304N14
Chromosome1 (Build37)7 (Build37)
Map Location 137,622,460 - 137,622,513133,592,877 - 133,594,040
singlet/doubletsingletsinglet
Overlap geneLOC623327
Upstream geneSyt2, Ppp1r12b, Ube2t, Lgr6, Ptprv, LOC100042432, Ptpn7, Arl8a, Gpr37l1, LOC100043064, Elf3, Rnpep, Timm17a, Lmod1, Tmem58, Ipo9, Nav1, EG215714
Downstream geneCsrp1, Phlda3, Tnni1, Lad1, Tnnt2, LOC100042477, Pkp1, 9830123M21Rik, Tmem9, Ascl5, Cacna1s, Kif21b, 2310006M14Rik, 5730559C18Rik, LOC100042513, Gpr25, Camsap1l1, 9230116N13Rik, Ddx59, Kif14, Zfp281
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-304N14.bB6Ng01-304N14.g
ACCGA098289GA098290
length1851,175
definitionB6Ng01-304N14.b B6Ng01-304N14.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(137,622,460 - 137,622,513)(133,592,877 - 133,594,040)
sequence
caaataccacacaatcgcagaaactatctgcagctgacaaaatcttgccc
cagctaaagcatgaagaactcatagtcagctgctgtggacagtctgaagc
cgccacaccccacacctgggattgacatgaaaaccatttctctggggttt
tttgtttggttggtttggttttgttttgggttttt
gaattcaccctggaattttcccgagacaggaagtctatgtctgtctactg
ttcaccagctaagtcctcacgggctgccgtgggcaacaagatgtttgtca
aggtcaggatcttctctctcttacgctggggccctttcctatggcggcct
tctgaaccctggaaggcaggcagggatctcggaattctgttctggttttc
tagggtgcccccgagggggtcatcgaccgctgtaactatgtgcgtgttgg
cacgacccgtgtgccattgacaggccccgtgaaggagaagatcatgtctg
tgatcaaggagtggggcactggtcgggacacactgcggtgcctggcgctg
gccacccgcgacacgccccccaaacgcgaggagatggttctggatgattc
agccaagttcatggagtatgaggtgagccacgaagggtctcttcttgtcc
tgggacttgtgttgagacagttttccccagtggctccctcttgcctgctg
ccatgattctcattccctagtacagtgtgtcagatgaacggctgtgtcct
gtggatccccaaatcacaaggcatgaaggtgtgacggtttcatgaaacac
ctagcccagtcagactcagtagctcggccctcagtagactgagataggcc
agcctcgaaagcaaggctccgtttcagaaacgaaaacaaaagccaagaaa
agaagacagggtcgtttagtccagtgctgcccagtgtggtgctggggctg
gaacccagggcaggcaggtgtgctccgtcccagccgcacctgcagccaca
gtctgcattaaccgtgctctgtgggaatcactgtcacccggtgcagtgtc
tgagacaactgatgcacttcttgctgtggactctgaataacccccaaagc
tcactgcctgcattttataggaaatttatggcctgccaggtaacaggtgg
tgctcagagtgactggcccaacaagggctctgctaggagaccacaaagcc
actggtgtatatgtagcctttttccttttctatttttcttgttttgggtt
ttgctgtggtgttttcagatagagtttttgtaatgttagccaaggctgcc
tgaatcggtatttcatgatgcagccaggcctggccctccctgagtcagga
aatttcatgtgaatgtctcctcttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_137622460_137622513
seq2: B6Ng01-304N14.b_185_234 (reverse)

seq1  AAAAACCAAAAACCAAAAACCAAACCAACCAAACAAAGAACCACTGAGAG  50
      ||||||| |||||  |||||||||||||||||||||| |||| |  ||||
seq2  AAAAACCCAAAAC--AAAACCAAACCAACCAAACAAAAAACCCC--AGAG  46

seq1  AAAT  54
      ||||
seq2  AAAT  50

seq1: chr7_133592877_133594040
seq2: B6Ng01-304N14.g_72_1246 (reverse)

seq1  CAAGAGGA---ATT--CATGAA--TTCCTGAC-CAGGGAGGGCCAGCCCT  42
      ||||||||   |||  ||||||  |||||||| ||||||||||||| |||
seq2  CAAGAGGAGACATTCACATGAAATTTCCTGACTCAGGGAGGGCCAGGCCT  50

seq1  GGCTGCATCATGAATTCACGA-TCAGGGCCAGCCCTGGCT-ACATTAC-A  89
      |||||||||||||| |  ||| |||||  ||||| ||||| ||||||| |
seq2  GGCTGCATCATGAAATACCGATTCAGG--CAGCCTTGGCTAACATTACAA  98

seq1  AAACTCTATCTGAAAAACAACCACAGCAAAAACCAAAACAAAGAAAAAAT  139
      ||||||||||||||||   |||||||||||| |||||||||   ||||||
seq2  AAACTCTATCTGAAAA--CACCACAGCAAAACCCAAAACAA--GAAAAAT  144

seq1  AGAAAAAGAAAA--GCTACATATTAACACAGTGGC-TTGT-GTCTCCTAG  185
      |||||| |||||  |||||||||  || ||||||| |||| |||||||||
seq2  AGAAAAGGAAAAAGGCTACATATACAC-CAGTGGCTTTGTGGTCTCCTAG  193

seq1  CAGAGCCCTTGTT-GGCCAGTCACTCTGAGCACACCCTGTTACCTGGCAG  234
      ||||||||||||| |||||||||||||||||||  |||||||||||||||
seq2  CAGAGCCCTTGTTGGGCCAGTCACTCTGAGCACCACCTGTTACCTGGCAG  243

seq1  GCCAT-AATCTCCTAT-AAATGCAGGCAGTGAGCTTTGGGGGTTATTCAG  282
      ||||| ||| |||||| |||||||||||||||||||||||||||||||||
seq2  GCCATAAATTTCCTATAAAATGCAGGCAGTGAGCTTTGGGGGTTATTCAG  293

seq1  AGTCCACAGCAAGAAGTGCATCAGTTGTCTCAGACACTGCACCGGGTGAC  332
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCACAGCAAGAAGTGCATCAGTTGTCTCAGACACTGCACCGGGTGAC  343

seq1  AGTGATTCCCACAGAGCACGGTTAATGCAGACTGTGGCTGCAGGTGCGGC  382
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATTCCCACAGAGCACGGTTAATGCAGACTGTGGCTGCAGGTGCGGC  393

seq1  TGGGACGGAGCACACCTGCCTGCCCTGGGTTCCAGCCCCAGCACCACACT  432
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACGGAGCACACCTGCCTGCCCTGGGTTCCAGCCCCAGCACCACACT  443

seq1  GGGCAGCACTGGACTAAACGACCCTGTCTTCTTTTCTTGGCTTTTGTTTT  482
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGCACTGGACTAAACGACCCTGTCTTCTTTTCTTGGCTTTTGTTTT  493

seq1  CGTTTCTGAAACGGAGCCTTGCTTTCGAGGCTGGCCTATCTCAGTCTACT  532
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTTCTGAAACGGAGCCTTGCTTTCGAGGCTGGCCTATCTCAGTCTACT  543

seq1  GAGGGCCGAGCTACTGAGTCTGACTGGGCTAGGTGTTTCATGAAACCGTC  582
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGCCGAGCTACTGAGTCTGACTGGGCTAGGTGTTTCATGAAACCGTC  593

seq1  ACACCTTCATGCCTTGTGATTTGGGGATCCACAGGACACAGCCGTTCATC  632
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCTTCATGCCTTGTGATTTGGGGATCCACAGGACACAGCCGTTCATC  643

seq1  TGACACACTGTACTAGGGAATGAGAATCATGGCAGCAGGCAAGAGGGAGC  682
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACACACTGTACTAGGGAATGAGAATCATGGCAGCAGGCAAGAGGGAGC  693

seq1  CACTGGGGAAAACTGTCTCAACACAAGTCCCAGGACAAGAAGAGACCCTT  732
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGGGAAAACTGTCTCAACACAAGTCCCAGGACAAGAAGAGACCCTT  743

seq1  CGTGGCTCACCTCATACTCCATGAACTTGGCTGAATCATCCAGAACCATC  782
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGGCTCACCTCATACTCCATGAACTTGGCTGAATCATCCAGAACCATC  793

seq1  TCCTCGCGTTTGGGGGGCGTGTCGCGGGTGGCCAGCGCCAGGCACCGCAG  832
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCGCGTTTGGGGGGCGTGTCGCGGGTGGCCAGCGCCAGGCACCGCAG  843

seq1  TGTGTCCCGACCAGTGCCCCACTCCTTGATCACAGACATGATCTTCTCCT  882
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCCCGACCAGTGCCCCACTCCTTGATCACAGACATGATCTTCTCCT  893

seq1  TCACGGGGCCTGTCAATGGCACACGGGTCGTGCCAACACGCACATAGTTA  932
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACGGGGCCTGTCAATGGCACACGGGTCGTGCCAACACGCACATAGTTA  943

seq1  CAGCGGTCGATGACCCCCTCGGGGGCACCCTAGAAAACCAGAACAGAATT  982
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCGGTCGATGACCCCCTCGGGGGCACCCTAGAAAACCAGAACAGAATT  993

seq1  CCGAGATCCCTGCCTGCCTTCCAGGGTTCAGAAGGCCGCCATAGGAAAGG  1032
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAGATCCCTGCCTGCCTTCCAGGGTTCAGAAGGCCGCCATAGGAAAGG  1043

seq1  GCCCCAGCGTAAGAGAGAGAAGATCCTGACCTTGACAAACATCTTGTTGC  1082
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCAGCGTAAGAGAGAGAAGATCCTGACCTTGACAAACATCTTGTTGC  1093

seq1  CCACGGCAGCCCGTGAGGACTTAGCTGGTGAACAGTAGACAGACATAGAC  1132
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACGGCAGCCCGTGAGGACTTAGCTGGTGAACAGTAGACAGACATAGAC  1143

seq1  TTCCTGTCTCGGGAAAATTCCAGGGTGAATTC  1164
      ||||||||||||||||||||||||||||||||
seq2  TTCCTGTCTCGGGAAAATTCCAGGGTGAATTC  1175