BAC Information

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BAC

Clone NameB6Ng01-304P11
Chromosome7 (Build37)
Map Location 147,604,058 - 147,605,102
singlet/doubletsinglet
Overlap geneOlfr532
Upstream geneInpp5a, Nkx6-2, E030019B06Rik, 9330101J02Rik, LOC100043472, EG434253, EG664869, Gpr123, LOC244229, Kndc1, Utf1, LOC100039095, 6430531B16Rik, Adam8, Tubgcp2, Zfp511, Msx3, Drd1ip, Prap1, 1810014F10Rik, Echs1, Paox, Mtg1, Sprn, Olfr522, Olfr523, Olfr524, E430002D04Rik, 5830411N06Rik, EG622335, Olfr525, Olfr527, GA_x5J8B7W72BC-152913-152037, Olfr60, GA_x5J8B7W72BC-125691-125311, Olfr530, LOC622973, Olfr531
Downstream geneOlfr533, Olfr534-ps1, Olfr535, Olfr536, Olfr537-ps1, Olfr1523-ps1, Olfr538, Olfr1553-ps1, Olfr46, Olfr61, Olfr53, Olfr539, GA_x5J8B7W3EKE-4574231-4574913, Olfr45, Olfr541, GA_x5J8B7W3EKE-4522784-4521912, Cyp2e1, Syce1, LOC100043529, BC066028, 1190003J15Rik, Scgb1c1, Odf3, Bet1l, Ric8, Sirt3, Psmd13, LOC100043546, Cox8b, Nlrp6, Athl1, Ifitm5, Ifitm2, Ifitm1, LOC665143, Ifitm3, Ifitm6, B4galnt4, Pkp3, Sigirr, Trp53i5, Ptdss2, Rnh1, LOC546015, Hras1, Lrrc56, 1600016N20Rik, Rassf7, AA673488, Irf7, Mucdhl, Sct, Drd4, Deaf1, Tmem80, Eps8l2, B230206H07Rik, Taldo1, LOC100043585, Pddc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-304P11.bB6Ng01-304P11.g
ACCGA098378GA098379
length1,1941,064
definitionB6Ng01-304P11.b B6Ng01-304P11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcccccattgttggtg
ggattgcaggcttgtacagccactttggaaatcagtcttgcggttcctca
taaaattggacacagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcaaccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtgatacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggtgggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatacaatttgctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggactatgtagagactgccatatccagagatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattaaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtcgatgctcacagtcagctaatggatggatcacagggctccca
atggaggagctagagaaagtagccaaggagctaaggtatctgcaacccta
taggtggaacacattatgactaaccagtacccgggagctcttgactctag
ctgcatatgtatcaaggatgggctagtgggcatccactggaaggaaggcc
atttggcattgcacctttaatgcccagtacagggtacgctaggtctaagg
gggatggcggtaagcaaattgcgactcatccctatcgctgacac
gaattcatggtctttaaaaagaaggtacacatatagatccagaggtgagg
aattacaggggcagctgaacatttgtaggttgctagcaaaagcatcaaag
aacagagtgtttattatagcctggagaaaactgtaggggagggaagagag
tacaggaggatgctatggacagtgacatccagaggccagagggagattga
acatctactcagtctgcagaaatttctgcccaaaacaagatatgatagca
aaagttccggcagaaaaagaacagaggagtcaagccacaccttcctgggt
attgctgatatgaaaagaatgctccttgttcgctctcctctcagaggtgt
aaggaccatggtgccaccagacacagttctcaagtacaaactaagaggac
ttagtccaatataggtgtttgggtgattttctcaaatgcatgataccaaa
aagctctatgtaagagatagctttccaggatatacacacagccttcctca
gacctggatgcccacacttccaaaagaaaatggccagtgtctcctccaag
gagggcacagaagatgtacatctacaatataaattaactatctgtactct
gacaggacatcaaattctcagtcacacatcccatatagttcaacaacagc
ttgatcaaatcacatttggtgacttctgcctcctcaatgaaaacagggaa
ataaccttttgagggctaccttcacatccttgttccttagagaataaatg
atgggattcaaggtagggctgactgctgtgtacagtaaggtaacaacctt
gctattctggaaggaggatccagagccaggctgtagataggtgtagatga
tggtggagtagtacagggtgactactaccaagtgggcagaagcaggtaga
agaatgcacgcttctttgctccttcggctgagcgaaatgcccaggatgtc
tgggaaatgatgaagctgtaggattatcattagtcaccagaaaggtggaa
tcacaccaaaataaaactttctggcgatgactaagcattatggttgttga
agggtgggctgggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_147604058_147605102
seq2: B6Ng01-304P11.g_66_1129

seq1  GAATTCATGGTCTTTAAAAAGAAGGTACACATATAGATCCAGAGGTGAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGGTCTTTAAAAAGAAGGTACACATATAGATCCAGAGGTGAGG  50

seq1  AATTACAGGGGCAGCTGAACATTTGTAGGTTGCTAGCAAAAGCATCAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACAGGGGCAGCTGAACATTTGTAGGTTGCTAGCAAAAGCATCAAAG  100

seq1  AACAGAGTGTTTATTATAGCCTGGAGAAAACTGTAGGGGAGGGAAGAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAGTGTTTATTATAGCCTGGAGAAAACTGTAGGGGAGGGAAGAGAG  150

seq1  TACAGGAGGATGCTATGGACAGTGACATCCAGAGGCCAGAGGGAGATTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGAGGATGCTATGGACAGTGACATCCAGAGGCCAGAGGGAGATTGA  200

seq1  ACATCTACTCAGTCTGCAGAAATTTCTGCCCAAAACAAGATATGATAGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTACTCAGTCTGCAGAAATTTCTGCCCAAAACAAGATATGATAGCA  250

seq1  AAAGTTCCGGCAGAAAAAGAACAGAGGAGTCAAGCCACACCTTCCTGGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTCCGGCAGAAAAAGAACAGAGGAGTCAAGCCACACCTTCCTGGGT  300

seq1  ATTGCTGATATGAAAAGAATGCTCCTTGTTCGCTCTCCTCTCAGAGGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTGATATGAAAAGAATGCTCCTTGTTCGCTCTCCTCTCAGAGGTGT  350

seq1  AAGGACCATGGTGCCACCAGACACAGTTCTCAAGTACAAACTAAGAGGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACCATGGTGCCACCAGACACAGTTCTCAAGTACAAACTAAGAGGAC  400

seq1  TTAGTCCAATATAGGTGTTTGGGTGATTTTCTCAAATGCATGATACCAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTCCAATATAGGTGTTTGGGTGATTTTCTCAAATGCATGATACCAAA  450

seq1  AAGCTCTATGTAAGAGATAGCTTTCCAGGATATACACACAGCCTTCCTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCTATGTAAGAGATAGCTTTCCAGGATATACACACAGCCTTCCTCA  500

seq1  GACCTGGATGCCCACACTTCCAAAAGAAAATGGCCAGTGTCTCCTCCAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTGGATGCCCACACTTCCAAAAGAAAATGGCCAGTGTCTCCTCCAAG  550

seq1  GAGGGCACAGAAGATGTACATCTACAATATAAATTAACTATCTGTACTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGCACAGAAGATGTACATCTACAATATAAATTAACTATCTGTACTCT  600

seq1  GACAGGACATCAAATTCTCAGTCACACATCCCATATAGTTCAACAACAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGACATCAAATTCTCAGTCACACATCCCATATAGTTCAACAACAGC  650

seq1  TTGATCAAATCACATTTGGTGACTTCTGCCTCCTCAATGAAAACAGGGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATCAAATCACATTTGGTGACTTCTGCCTCCTCAATGAAAACAGGGAA  700

seq1  ATAACCTTTTGAGGGCTACCTTCACATCCTTGTTCCTTAGAGAATAAATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACCTTTTGAGGGCTACCTTCACATCCTTGTTCCTTAGAGAATAAATG  750

seq1  ATGGGATTCAAGGTAGGGCTGACTGCTGTGTACAGTAAGGTAACAACCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGATTCAAGGTAGGGCTGACTGCTGTGTACAGTAAGGTAACAACCTT  800

seq1  GCTATTCTGGAAGGAGGATCCAGAGCCAGGCTGTAGATAGGTGTAGATGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATTCTGGAAGGAGGATCCAGAGCCAGGCTGTAGATAGGTGTAGATGA  850

seq1  TGGTGGAGTAGTACAGGGTGACTACTACCAGGTGGGCAG-AGCAGGTAG-  898
      |||||||||||||||||||||||||||||| |||||||| ||||||||| 
seq2  TGGTGGAGTAGTACAGGGTGACTACTACCAAGTGGGCAGAAGCAGGTAGA  900

seq1  AGAATGCACGCTTCTT---GCCCTCGGCTGAGCG-AATGCGCAGGATG-C  943
      ||||||||||||||||    || ||||||||||| ||||| ||||||| |
seq2  AGAATGCACGCTTCTTTGCTCCTTCGGCTGAGCGAAATGCCCAGGATGTC  950

seq1  T-GGAAATGATGAAGCTGTAGGA-TATCA-TAGTCAACAGAAAGTTG--A  988
      | ||||||||||||||||||||| ||||| |||||| ||||||| ||  |
seq2  TGGGAAATGATGAAGCTGTAGGATTATCATTAGTCACCAGAAAGGTGGAA  1000

seq1  GCACACCAAAATAAACATCT---GCGATGAC-AAGCATAAT-GTTGTTG-  1032
       ||||||||||||||  | |   |||||||| |||||| || ||||||| 
seq2  TCACACCAAAATAAAACTTTCTGGCGATGACTAAGCATTATGGTTGTTGA  1050

seq1  AGGGT-GGTTGGGC  1045
      ||||| || |||||
seq2  AGGGTGGGCTGGGC  1064