BAC Information

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BAC

Clone NameB6Ng01-305H17
Chromosome7 (Build37)
Map Location 66,854,936 - 66,856,090
singlet/doubletsinglet
Overlap geneLOC100041029
Upstream geneAtp10a, LOC621446, LOC668811, LOC668813, LOC668815, EG668818, Ube3a, LOC100040985, LOC100041010
Downstream geneLOC100041051, Pwcr1, LOC664788, Snrpn, Snurf, EG664849, LOC100041201
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-305H17.bB6Ng01-305H17.g
ACCGA098761GA098762
length1,1511,194
definitionB6Ng01-305H17.b B6Ng01-305H17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccctgaagtccttagatgccctttccctgtttcccgtgagaggaa
atgtggacatctagggtgcacattggttggcaaacactgcatgccaacaa
gcacctagtcccacaatggaaccttgggcatttctgcaaggatcgcccct
tgctcatgataatgtcttttctggtgttttgcagtcatctcacatgccac
cttggaaggcagagaaacacagataatcaggtaagtggtcagaacatggt
aaagcctccacatccaggtgacctcccccttcatgatttggctttcaatt
ctcagccagtctgttcttttgcaatttggggataacaaaatggtatgcaa
cggttccaaaggtgctcgatttaggctatgttctcccatgtagatcccct
ggtttgtaaagctttaaggaatgtgttcaactcccgataattgtttttga
ataattttgacgtacttctcatggagagaggaggatgatattttttgaat
gttgggatctcatactttgatgcttacaattccatggcaaatatctacag
gaggacagcacagaactcccgggccttatggtatgcttcttttcccttga
aaggggaggccgaagtgacagtgcctttttttagggaaaaagaaggattc
tatgatatccaaaaggctgtcctccccaggaagggttcacaaagggcaat
ccctctagcagatattccaaagatctcaccccagagacaatttaccaatg
tggatagggtgagatattcatttttaccttggtgcccaccacattccaaa
tttccttcatggtatcatttagggcacttactgaacctcactgcagaatc
actgaggaaaaaaagctctacacattaggttgatacagggtaaaggccag
gtgtttaaagaacctaattccactttgatttcataacaccaagtcctgac
ttgagtccagcaacagtgcttacactcacgttttacagcaggcaacccat
acacgttgacacaaatggatacatgttatagacatgggttctggtggcct
cggtccaggattctcgggagaattttcaggatcactgtcacgttgagtcg
gttctacaacatagaacttacagagtctgatgccaattgcacttgagcaa
a
gaattctcctctgaagaaacagactgggaggaagaagcagctcattacca
gccagataaagtgctagctagttggtcaagaaaaaagccaaaagcggctg
gcgaaagccagcatgctgttcagcctgcgggcagtcggcttcaaggtccg
ccctatgcggagcccccgccctgcgtagtgcgtcagccctgcgcagagag
acaatgcgcagagagacaatgcgcagagaggcaatgcgcagactcattca
ttcccagagaggaacaaaggaaaatacaacaggcatttccggtctttgaa
ggagccgagggtgggcgtgtccacgctccggtagaatacgtgcagattaa
agaacttgccgagtcggtccgtaaatacagaaccaatgctaattttacct
tggtgcagttagacaggcttgccggcatggcactaactcctgctgactgg
caaacgattgtaaaagccgctctccctagtatgggcaaatatatggaatg
gagagcgctttggcatgaggctgcacaagcacaggcccgaacaaacgcag
ctgctttgactacagagcagagagattggacttttgacttgttaacgggt
cagggagcttattctgctgatcagacaaactaccattggggagcttatgc
ccaaatttcctccacggctattagggcctggaaggcgctctcccgagcag
gtgaagccactgggcaattaacaaagatcgtccagggacctcaggagtcc
ttctcagattttgtggccagaatgacagaggcagcagagcatatttttgg
agactcagagcaagccgcacctctggtagaacagctcatctatgagcaag
ccacaaaggagtgccgagcggccatagccccaagaaagaacaaaggctta
caagactgggctcagagtttgtcgagagcttgggggacctctcagcaatg
caaggtttagcggctgccatcccttatcccaaaccgctccatgggagaaa
tgatcagaggacatgttttaactgtggaaagcctgggcatcttagaagat
gcagagctccagataacagcagggactctcaactcttgctctaaggtggt
gcaagggtatcatagagcgaacagtgtcgctctgtgagatacgccagatc
tcccactgaagtcaactcagcctatgttgtccaagaaaaacacg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_66854936_66856090
seq2: B6Ng01-305H17.b_45_1195 (reverse)

seq1  TTTGCTCAAAGTGCAAATGTGGCATCAGACCTCTGTAAGGTCTATGTTGT  50
      ||||||| ||||||||   |||||||||| ||||||||| ||||||||||
seq2  TTTGCTC-AAGTGCAA--TTGGCATCAGA-CTCTGTAAGTTCTATGTTGT  46

seq1  AGGACCCGACTCAACGTGACAGTTGATTCCTGAAAA-TCTCCCGAGAATC  99
      | || ||||||||||||||||| ||| ||||||||| |||||||||||||
seq2  A-GAACCGACTCAACGTGACAG-TGA-TCCTGAAAATTCTCCCGAGAATC  93

seq1  CTGGACCCAGGCCA-CAGAACCCATGTCTAT-ACATGTATCCATTTGTGT  147
      ||||||| |||||| |||||||||||||||| ||||||||||||||||||
seq2  CTGGACCGAGGCCACCAGAACCCATGTCTATAACATGTATCCATTTGTGT  143

seq1  CAACGTGTTATGGGTTGCCCTGCTGTAAAACGTGAGTGTAAGCACTGTTG  197
      ||||||| ||||||||| ||||||||||||||||||||||||||||||||
seq2  CAACGTG-TATGGGTTG-CCTGCTGTAAAACGTGAGTGTAAGCACTGTTG  191

seq1  CTGGACTCAAGTCAGGACTTGGTGTTATG-AATCAAAGTGGAATTAGGTT  246
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CTGGACTCAAGTCAGGACTTGGTGTTATGAAATCAAAGTGGAATTAGGTT  241

seq1  CTTTAAACACCTGGCC-TTACCCTGTATCAACCTAATGTGTAGAGCTTTT  295
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CTTTAAACACCTGGCCTTTACCCTGTATCAACCTAATGTGTAGAGCTTTT  291

seq1  TTTCCTCAGTGATTCTGCAGTGAGGTTCAGTAAGTGCCCTAAATGATACC  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTCAGTGATTCTGCAGTGAGGTTCAGTAAGTGCCCTAAATGATACC  341

seq1  ATGAAGGAAATTTGGAATGTGGTGGGCACCAAGGTAAAAATGAATATCTC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGGAAATTTGGAATGTGGTGGGCACCAAGGTAAAAATGAATATCTC  391

seq1  ACCCTATCCACATTGGTAAATTGTCTCTGGGGTGAGATCTTTGGAATATC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTATCCACATTGGTAAATTGTCTCTGGGGTGAGATCTTTGGAATATC  441

seq1  TGCTAGAGGGATTGCCCTTTGTGAACCCTTCCTGGGGAGGACAGCCTTTT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAGAGGGATTGCCCTTTGTGAACCCTTCCTGGGGAGGACAGCCTTTT  491

seq1  GGATATCATAGAATCCTTCTTTTTCCCTAAAAAAAGGCACTGTCACTTCG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATCATAGAATCCTTCTTTTTCCCTAAAAAAAGGCACTGTCACTTCG  541

seq1  GCCTCCCCTTTCAAGGGAAAAGAAGCATACCATAAGGCCCGGGAGTTCTG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCCCCTTTCAAGGGAAAAGAAGCATACCATAAGGCCCGGGAGTTCTG  591

seq1  TGCTGTCCTCCTGTAGATATTTGCCATGGAATTGTAAGCATCAAAGTATG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTCCTCCTGTAGATATTTGCCATGGAATTGTAAGCATCAAAGTATG  641

seq1  AGATCCCAACATTCAAAAAATATCATCCTCCTCTCTCCATGAGAAGTACG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCCCAACATTCAAAAAATATCATCCTCCTCTCTCCATGAGAAGTACG  691

seq1  TCAAAATTATTCAAAAACAATTATCGGGAGTTGAACACATTCCTTAAAGC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAATTATTCAAAAACAATTATCGGGAGTTGAACACATTCCTTAAAGC  741

seq1  TTTACAAACCAGGGGATCTACATGGGAGAACATAGCCTAAATCGAGCACC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACAAACCAGGGGATCTACATGGGAGAACATAGCCTAAATCGAGCACC  791

seq1  TTTGGAACCGTTGCATACCATTTTGTTATCCCCAAATTGCAAAAGAACAG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAACCGTTGCATACCATTTTGTTATCCCCAAATTGCAAAAGAACAG  841

seq1  ACTGGCTGAGAATTGAAAGCCAAATCATGAAGGGGGAGGTCACCTGGATG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGCTGAGAATTGAAAGCCAAATCATGAAGGGGGAGGTCACCTGGATG  891

seq1  TGGAGGCTTTACCATGTTCTGACCACTTACCTGATTATCTGTGTTTCTCT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGCTTTACCATGTTCTGACCACTTACCTGATTATCTGTGTTTCTCT  941

seq1  GCCTTCCAAGGTGGCATGTGAGATGACTGCAAAACACCAGAAAAGACATT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTCCAAGGTGGCATGTGAGATGACTGCAAAACACCAGAAAAGACATT  991

seq1  ATCATGAGCAAGGGGCGATCCTTGCAGAAATGCCCAAGGTTCCATTGTGG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGAGCAAGGGGCGATCCTTGCAGAAATGCCCAAGGTTCCATTGTGG  1041

seq1  GACTAGGTGCTTGTTGGCATGCAGTGTTTGCCAACCAATGTGCACCCTAG  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAGGTGCTTGTTGGCATGCAGTGTTTGCCAACCAATGTGCACCCTAG  1091

seq1  ATGTCCACATTTCCTCTCACGGGAAACAGGGAAAGGGCATCTAAGGACTT  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCACATTTCCTCTCACGGGAAACAGGGAAAGGGCATCTAAGGACTT  1141

seq1  CAGGGAATTC  1155
      ||||||||||
seq2  CAGGGAATTC  1151