BAC Information

Click to search

BAC

Clone NameB6Ng01-305J17
Chromosome7 (Build37)
Map Location 89,159,099 - 89,160,067
singlet/doubletsinglet
Overlap genenone
Upstream geneZfp592, Alpk3, Slc28a1, EG623286, LOC100043130, Pde8a, EG636544, Rps17, Cpeb1, LOC623355, Ap3b2, BC048679, Fsd2, Whdc1, Homer2, 2610204K14Rik, 3110040N11Rik, Btbd1, Tm6sf1, LOC100043161, Hdgfrp3, Bnc1
Downstream geneSh3gl3, Adamtsl3, 1700129I04Rik, Eftud1, LOC100038986, LOC619808, Rkhd3, LOC619909
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-305J17.g
ACCGA098857
length969
definitionB6Ng01-305J17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatttactctcagcggatcctccagtttgcatggattagcaggtt
cactttgcataataggttggccaaaagtatacttctgagggctacttata
tatctgctctaagaaataaacccaattagaggcctcttcccttcttagta
cagaagacaaggttcattaatgataatgagggtctgagctacatcaggcc
ctaggtttgtaattaatcttgtacaggctttcccgcttgaaaatattgaa
gaatatcaaagtcgtgaagatcgcccccggctagaactcaagcacgtgaa
aaaggaagggcaggctcctacacagcgttttggctggtcttggacaatgt
tacttctgacgatgcgctcagcttggaaggcgtaaccataattaggtcaa
atgaaagcctttagataactcaacaggattgactatgaaaaatccatact
ttctatattcgatggcattgaaagagatgtccagaataagtgacaaagca
caggagcacagagctttaaagacatggcttgctgggctctggtcaaagac
cccccaattcaaaatggcttgccagctctagattcagtcaaagattgaag
gtggggagagattgaggagacagcgcacactgacctctggccccccacat
gcaccatacacaaatgttcatacatatgaacgattttacacacacacaca
cacacacacacacacacacacaccacaaacactgggtcaagaggaactga
agataccagtggttggttttaagattatgcatatctccaaatgacttaaa
tcaaatatctcaagtattagtggcacgctgtgtactctttttctgtgatt
tcttctcttcctatgattatttttctataatgatgttgcctttggaacca
gttagaataaagtaatttgcaatgctaatgtgccctgtgactgtatttag
tgtgtgtgcgtgtgtgtgt
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_89159099_89160067
seq2: B6Ng01-305J17.g_68_1036

seq1  GAATTCATTTACTCTCAGCGGATCCTCCAGTTTGCATGGATTAGCAGGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTACTCTCAGCGGATCCTCCAGTTTGCATGGATTAGCAGGTT  50

seq1  CACTTTGCATAATAGGTTGGCCAAAAGTATACTTCTGAGGGCTACTTATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTGCATAATAGGTTGGCCAAAAGTATACTTCTGAGGGCTACTTATA  100

seq1  TATCTGCTCTAAGAAATAAACCCAATTAGAGGCCTCTTCCCTTCTTAGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGCTCTAAGAAATAAACCCAATTAGAGGCCTCTTCCCTTCTTAGTA  150

seq1  CAGAAGACAAGGTTCATTAATGATAATGAGGGTCTGAGCTACATCAGGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGACAAGGTTCATTAATGATAATGAGGGTCTGAGCTACATCAGGCC  200

seq1  CTAGGTTTGTAATTAATCTTGTACAGGCTTTCCCGCTTGAAAATATTGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGTTTGTAATTAATCTTGTACAGGCTTTCCCGCTTGAAAATATTGAA  250

seq1  GAATATCAAAGTCGTGAAGATCGCCCCCGGCTAGAACTCAAGCACGTGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATCAAAGTCGTGAAGATCGCCCCCGGCTAGAACTCAAGCACGTGAA  300

seq1  AAAGGAAGGGCAGGCTCCTACACAGCGTTTTGGCTGGTCTTGGACAATGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAAGGGCAGGCTCCTACACAGCGTTTTGGCTGGTCTTGGACAATGT  350

seq1  TACTTCTGACGATGCGCTCAGCTTGGAAGGCGTAACCATAATTAGGTCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCTGACGATGCGCTCAGCTTGGAAGGCGTAACCATAATTAGGTCAA  400

seq1  ATGAAAGCCTTTAGATAACTCAACAGGATTGACTATGAAAAATCCATACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAGCCTTTAGATAACTCAACAGGATTGACTATGAAAAATCCATACT  450

seq1  TTCTATATTCGATGGCATTGAAAGAGATGTCCAGAATAAGTGACAAAGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATATTCGATGGCATTGAAAGAGATGTCCAGAATAAGTGACAAAGCA  500

seq1  CAGGAGCACAGAGCTTTAAAGACATGGCTTGCTGGGCTCTGGTCAAAGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGCACAGAGCTTTAAAGACATGGCTTGCTGGGCTCTGGTCAAAGAC  550

seq1  CCCCCAATTCAAAATGGCTTGCCAGCTCTAGATTCAGTCAAAGATTGAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCAATTCAAAATGGCTTGCCAGCTCTAGATTCAGTCAAAGATTGAAG  600

seq1  GTGGGGAGAGATTGAGGAGACAGCGCACACTGACCTCTGGCCCCCCACAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGAGAGATTGAGGAGACAGCGCACACTGACCTCTGGCCCCCCACAT  650

seq1  GCACCATACACAAATGTTCATACATATGAACGATTTTACACACACACACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCATACACAAATGTTCATACATATGAACGATTTTACACACACACACA  700

seq1  CACACACACACACACACACACACCACAAACACTGGGTCAAGAGGAACTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACCACAAACACTGGGTCAAGAGGAACTGA  750

seq1  AGATACCAGTGGTTGGTTTTAAGATTATGCATATCTCCAAATGACTTAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATACCAGTGGTTGGTTTTAAGATTATGCATATCTCCAAATGACTTAAA  800

seq1  TCAAATATCTCAAGTATTAGTGGCACGCTGTGTACTCTTTTTCTGTGATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATATCTCAAGTATTAGTGGCACGCTGTGTACTCTTTTTCTGTGATT  850

seq1  TCTTCTCTTCCTATGATTATTTTTCTATAATGATGTTGCCTTTGGAACCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTCTTCCTATGATTATTTTTCTATAATGATGTTGCCTTTGGAACCA  900

seq1  GTTAGTATAAAGTAATTTGCAATGCTAGTGTGCCCTGTGACTGTATTTAG  950
      ||||| ||||||||||||||||||||| ||||||||||||||||||||||
seq2  GTTAGAATAAAGTAATTTGCAATGCTAATGTGCCCTGTGACTGTATTTAG  950

seq1  TGTGTGTGTGTGTGTGTGT  969
      |||||||| ||||||||||
seq2  TGTGTGTGCGTGTGTGTGT  969