BAC Information

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BAC

Clone NameB6Ng01-305K11
Chromosome7 (Build37)7 (Build37)
Map Location 111,998,826 - 111,999,439110,269,090 - 110,270,222
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneHbb-y, Olfr66, Olfr64, Olfr65, Olfr631, Olfr632, Olfr633, Olfr634-ps1, LOC233614, Olfr635, Olfr636-ps1, Olfr637-ps1, Olfr638, Olfr639, Olfr640, Olfr641, Olfr642, Olfr643, Olfr644, Olfr645, Olfr646, 4931431F19Rik, Ubqln3, Ubqlnl, E030002O03Rik, Olfr647-ps1, Olfr648, Olfr649, Olfr650-ps1, Trim6, LOC667497, EG667823, Trim12, Trim34, 9230105E10Rik, A530023O14Rik, EG434219, LOC100041595, Trim30, AI451617, LOC672495, LOC625305, EG625321, Olfr651, Olfr652, Olfr653, Olfr654, Olfr655, Olfr656, Olfr657, Olfr658, LOC667882, Olfr659, GA_x5J8B7W3SPQ-80592-80214, Olfr661, LOC625495, Olfr662-ps1, Olfr663, Olfr664, EG625530, LOC100042613, LOC233637, Dub1a
Downstream geneDub1, Olfr665, Olfr666, Olfr667, Olfr668, Olfr669, EG545987, Olfr670, Olfr671, Olfr672, GA_x5J8B7W6B6J-189947-189022, Olfr674-ps1, Olfr675, Olfr676, Olfr677, LOC667987, Olfr678, Olfr679, Olfr680-ps1, Olfr681, Olfr682-ps1, Olfr683, Olfr684, Olfr685, Olfr686, EG668035, Olfr688, Olfr689, Olfr690, Olfr691, Olfr692, EG545989, 4632419K20Rik, Cnga4, EG244189, Cckbr, Prkcdbp, Smpd1, Apbb1, Hpxn, Trim3, Arfip2, Fxc1, Dnhd1, LOC100042811, LOC672646, 1500003O22Rik, Ilk, Taf10, Tpp1, Dchs1, Mrpl17, 9130208D14Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-305K11.bB6Ng01-305K11.g
ACCGA098892GA098893
length1,1051,127
definitionB6Ng01-305K11.b B6Ng01-305K11.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(111,998,826 - 111,999,439)(110,269,090 - 110,270,222)
sequence
gaattccagactctttatgcagacaactgaattaatgactagtgctttat
tgttttatggtagtgcttaattagttactgaataggataaactccttgct
gctatctggaatctaagaacactgggaaaaggctttagctatgttagaat
acaatcttaaaaggcatttactataaggtaatgcttaattgagtgcacgt
gaatctatatattagactaatgtggtggaaatttgattattatgggttag
ggaaaaactccataactccaggaggaaaatttccatggaacttttatcct
cgtgaaacattttccaggcttttcgcctgtcaaactgacccaaactggag
agctgactttcgccagacatccaggaggagagtcctagaaattcatttct
catgagcagcttgttggcatttctgcctcacaagctgactccaacagagt
gccctggcaagacacaaacaaatcaaataatccaatttaaaaatggggta
cagagttaaacagaattctcaacaaagtaatcttttatggccaggaatca
ctaaaagaaagcttcgatgtttttagtcatcacggaaatgcaaatcaaaa
ggaccctgagattccatcctgcaccaataagaatgactatgtaattagtg
gaatcactaaaatgtaggctataatatcaatgcagaaatggacttgttac
caaggcaaggttaagcaggcaaagggcaaaactcttcctttttccctgtc
gttgtctagtagcaggtgttgctagattagatctggattcatgatttgga
ttcaaggtttgtgttctcccttccagatatggattaagatgtttcttcct
caaagattaagatcagaagttattctccctctcaatttagaaaaacaaaa
gaaaactacaggtgtgacctccattttttgctttttagttatcaccagat
gtagtcaaattgaccaccagagtaactgtcacagtccccaataatctttg
gaaaaaaaattattccacctgaaggaatgctggcttcaggtactttctta
cctccacccatgaaagcttagttcagaacagaatgtgtgtcccacactcc
tcatg
gaattcatttagagtatttacattaattatgtaatgctagccagaggtat
aaaatattgcttataaataacacacacacacacacacacacacacacaca
catatatatatatatgaaaatctcacaaatattagttttagcttggagta
aaaaatagcaatgtaaaacttattggttatataaaagttatatctcagat
gtattctactttatactgtttttgtttttttatacttttaatattttttc
tgacaaaaacatgtgacaaattgagtctactgacttatgaaagaatgaag
tatagattagaaatttgtttaatatattataatgtattatataaatacat
tataatatattaaatatatataatgtattatataaatgatttttgagaca
tagttcatgtagccatggctagcttttaagacactatgttgtgaaaatga
ccttgaaatcttcatcttcctgacctctcctcctgagtgctgagattaca
ggtgtaaaccatcatgctttgctgtattatttaattaagatttttgagag
taactttaagattttggctgtaaggcattatcagctgaagtttttgaact
acacttaaaattatgtttgaggaagcatccaacagcaggctgattgtttc
caaagccaatgtgcataagtagttagtttcaagcaatcatgctcagatgg
gcacatttattttggttgtagggaggcatgagtctcttgtggttttcagt
gagtttagaagtctaatattccagcagtgatgggaagctcatgggccaag
gaggggaggaaaatgtgccagagatagacacaaagggatggatgatgtta
gaatctcagagtggcatgtggaaggacaagagggaagtgaagggaaaatt
gataactaaaggggggacagaggagcagacacagtgggaaggagttatca
gagaggtgacaaagtagaagtgcagagacctctagtcactcactagtttc
aatgattcccagactgtgtgacaagacagattttgccaacttggtaaagc
agatatatttgattgtttacattaatatctcaatatttataattcatcaa
gaaattgtgccaaagctgattccttga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_111998826_111999439
seq2: B6Ng01-305K11.b_536_1151

seq1  AAAATGGGGTACAGAGTTAAACAGAATTCTCAACAAAGGAATTTTGTAAG  50
      |||||||||||||||||||||||||||||||||||||| ||| || || |
seq2  AAAATGGGGTACAGAGTTAAACAGAATTCTCAACAAAGTAATCTTTTATG  50

seq1  GCCAGGAATCACTAAAATAAAGGTTCAATGTTTTTAGTTATCACGGAAAT  100
      ||||||||||||||||| |||| ||| ||||||||||| |||||||||||
seq2  GCCAGGAATCACTAAAAGAAAGCTTCGATGTTTTTAGTCATCACGGAAAT  100

seq1  GCAAATCAAAAGGACCCTGAGATTCCATCCTGCACCAATAAGAATGACTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATCAAAAGGACCCTGAGATTCCATCCTGCACCAATAAGAATGACTA  150

seq1  AGCAATTAGTGGAATCACTAAAATATAGGCTATAATATCAATGCAGAAAT  200
       | ||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TGTAATTAGTGGAATCACTAAAATGTAGGCTATAATATCAATGCAGAAAT  200

seq1  GGACTTGTTACCAAGGCAAGGTTAAGCAGGCAAAGAGCAAAAATCTTCCT  250
      ||||||||||||||||||||||||||||||||||| |||||| |||||||
seq2  GGACTTGTTACCAAGGCAAGGTTAAGCAGGCAAAGGGCAAAACTCTTCCT  250

seq1  TTTTCCCTGTCGTTGTCTAGTAGCAGGTATTGCTAGATTAGATCTGGATT  300
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TTTTCCCTGTCGTTGTCTAGTAGCAGGTGTTGCTAGATTAGATCTGGATT  300

seq1  CAAGATTTGGATTAAAGGTTGGTCTTCTCCCTTCCAGATCCGGATTAAGG  350
      || |||||||||| |||||| || |||||||||||||||  |||||||| 
seq2  CATGATTTGGATTCAAGGTTTGTGTTCTCCCTTCCAGATATGGATTAAGA  350

seq1  TGTGTCTTCCTCAAAGATTCAGATCAGAAGTTATTCTCCCTCTTCAATTT  400
      ||| ||||||||||||||| |||||||||||||||||||||| |||||||
seq2  TGTTTCTTCCTCAAAGATTAAGATCAGAAGTTATTCTCCCTC-TCAATTT  399

seq1  AGAAAAACAAAAGAAAACCTACAGGTGTGCCCTCCATTTTTTGCTTTTTA  450
      ||||||||||||||||| ||||||||||| ||||||||||||||||||||
seq2  AGAAAAACAAAAGAAAA-CTACAGGTGTGACCTCCATTTTTTGCTTTTTA  448

seq1  GTTATCACCAGATGTAGTCAAATTGACCACCAAGAGTAGCCATCACAGTC  500
      ||||||||||||||||||||||||||||||| |||||| |  ||||||||
seq2  GTTATCACCAGATGTAGTCAAATTGACCACC-AGAGTAACTGTCACAGTC  497

seq1  CCCAATAATCTTTGG-AAAAAAATTA-TCCACCTGAAGGGAATGCT-GCT  547
      ||||||||||||||| |||||||||| |||||||||| |||||||| |||
seq2  CCCAATAATCTTTGGAAAAAAAATTATTCCACCTGAA-GGAATGCTGGCT  546

seq1  TCAGGGTACTTTCTTA-CTCCA-CCATGAAAGC-TAGTTCAAGAACAGAA  594
      ||| |||||||||||| ||||| |||||||||| |||||| |||||||||
seq2  TCA-GGTACTTTCTTACCTCCACCCATGAAAGCTTAGTTC-AGAACAGAA  594

seq1  T-TGTATCCCACACT-ATCATG  614
      | ||| |||||||||  |||||
seq2  TGTGTGTCCCACACTCCTCATG  616

seq1: chr7_110269090_110270222
seq2: B6Ng01-305K11.g_69_1195

seq1  GAATTCATTTAGAGTATTTACATTAATTATGTAATGCTAGCCAGAGGTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTAGAGTATTTACATTAATTATGTAATGCTAGCCAGAGGTAT  50

seq1  AAAATATTGCTTATAAATAACACACACACACACACACACACACACACACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATTGCTTATAAATAACACACACACACACACACACACACACACACA  100

seq1  CATATATATATATATGAAAATCTCACAAATATTAGTTTTAGCTTGGAGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATATATATATATGAAAATCTCACAAATATTAGTTTTAGCTTGGAGTA  150

seq1  AAAAATAGCAATGTAAAACTTATTGGTTATATAAAAGTTATATCTCAGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAGCAATGTAAAACTTATTGGTTATATAAAAGTTATATCTCAGAT  200

seq1  GTATTCTACTTTATACTGTTTTTGTTTTTTTATACTTTTAATATTTTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTCTACTTTATACTGTTTTTGTTTTTTTATACTTTTAATATTTTTTC  250

seq1  TGACAAAAACATGTGACAAATTGAGTCTACTGACTTATGAAAGAATGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAAAAACATGTGACAAATTGAGTCTACTGACTTATGAAAGAATGAAG  300

seq1  TATAGATTAGAAATTTGTTTAATATATTATAATGTATTATATAAATACAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGATTAGAAATTTGTTTAATATATTATAATGTATTATATAAATACAT  350

seq1  TATAATATATTAAATATATATAATGTATTATATAAATGATTTTTGAGACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATATATTAAATATATATAATGTATTATATAAATGATTTTTGAGACA  400

seq1  TAGTTCATGTAGCCATGGCTAGCTTTTAAGACACTATGTTGTGAAAATGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCATGTAGCCATGGCTAGCTTTTAAGACACTATGTTGTGAAAATGA  450

seq1  CCTTGAAATCTTCATCTTCCTGACCTCTCCTCCTGAGTGCTGAGATTACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGAAATCTTCATCTTCCTGACCTCTCCTCCTGAGTGCTGAGATTACA  500

seq1  GGTGTAAACCATCATGCTTTGCTGTATTATTTAATTAAGATTTTTGAGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTAAACCATCATGCTTTGCTGTATTATTTAATTAAGATTTTTGAGAG  550

seq1  TAACTTTAAGATTTTGGCTGTAAGGCATTATCAGCTGAAGTTTTTGAACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTTAAGATTTTGGCTGTAAGGCATTATCAGCTGAAGTTTTTGAACT  600

seq1  ACACTTAAAATTATGTTTGAGGAAGCATCCAACAGCAGGCTGATTGTTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTAAAATTATGTTTGAGGAAGCATCCAACAGCAGGCTGATTGTTTC  650

seq1  CAAAGCCAATGTGCATAAGTAGTTAGTTTCAAGCAATCATGCTCAGATGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCCAATGTGCATAAGTAGTTAGTTTCAAGCAATCATGCTCAGATGG  700

seq1  GCACATTTATTTTGGTTGTAGGGAGGCATGAGTCTCTTGTGGTTTTCAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATTTATTTTGGTTGTAGGGAGGCATGAGTCTCTTGTGGTTTTCAGT  750

seq1  GAGTTTAGAAGTCTAATATTCCAGCAGTGATGGGAAGCTCATGGGCCAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTAGAAGTCTAATATTCCAGCAGTGATGGGAAGCTCATGGGCCAAG  800

seq1  GAGGGGAGGAAAATGTGCCAGAGATAGACACAAAGGGATGGATGATGTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGAGGAAAATGTGCCAGAGATAGACACAAAGGGATGGATGATGTTA  850

seq1  GAATCTCAGAGTGGCATGTGGAAGGACAAGAGGGAAGTGAAGGGAAAATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTCAGAGTGGCATGTGGAAGGACAAGAGGGAAGTGAAGGGAAAATT  900

seq1  GATAACTAAA-GGGGGACAGAGGAGCAGACACAGTGGGAAGGAG-TATCA  948
      |||||||||| ||||||||||||||||||||||||||||||||| |||||
seq2  GATAACTAAAGGGGGGACAGAGGAGCAGACACAGTGGGAAGGAGTTATCA  950

seq1  GAGAGGTGACAAAGTAGGAAGTGCAGAGACCTCTAAGGTCACTCACTAAG  998
      |||||||||||||||| ||||||||||||||||||  |||||||||| ||
seq2  GAGAGGTGACAAAGTA-GAAGTGCAGAGACCTCTA--GTCACTCACT-AG  996

seq1  TTTCCAATGATTCCCCAGACATGTGTGACAAGACAGATATTGCCAACTTG  1048
      ||| |||||||| ||||||| ||||||||||||||||| |||||||||||
seq2  TTT-CAATGATT-CCCAGAC-TGTGTGACAAGACAGATTTTGCCAACTTG  1043

seq1  GTAAAAGCAGGGATATATTTGA-TGTTTACATTAATATCTCAATATTATA  1097
      || ||||||  ||||||||||| |||||||||||||||||||||||| ||
seq2  GT-AAAGCA--GATATATTTGATTGTTTACATTAATATCTCAATATT-TA  1089

seq1  TATTAAATCAAGAAA-TGTG-CAAAGCTGATTCTTTGA  1133
      || |  ||||||||| |||| |||||||||||| ||||
seq2  TAATTCATCAAGAAATTGTGCCAAAGCTGATTCCTTGA  1127