BAC Information

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BAC

Clone NameB6Ng01-305M02
Chromosome7 (Build37)
Map Location 100,711,972 - 100,806,918
singlet/doubletdoublet
Overlap geneLOC666783
Upstream geneCcdc90b, Ankrd42, Pcf11, LOC676240, LOC100040007, 4632427E13Rik, Rab30, 4632434I11Rik, Prcp, A830059I20Rik, LOC100040298
Downstream geneEG638305, EG545982
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-305M02.bB6Ng01-305M02.g
ACCGA098963GA098964
length1,1451,125
definitionB6Ng01-305M02.b B6Ng01-305M02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(100,711,972 - 100,713,119)(100,805,792 - 100,806,918)
sequence
gaattcaagagaaaacctttgggccctgactaagagctctggtttggtgt
ctttccaaactatctcatttcattttgacttaaatgctttccgaaatagt
caattttgtgtaaatttctttatctgtagacttacttctgcatgtttatt
ttttcaaaaagaaaaaaactcattacagtgaactgaaaaaataattactc
agatttggtatttatgttatctaaatataacatataatctaatatacatg
tgtatgggtatacatttagtaataaatgttcatacaattctatcaataat
acatcatgtgcaaattagtgtctgaattaatgttgtgtagctgctgctgg
aaaaagaaacctattttattgcacaataaaatgcttttaattgttggagt
cgaacagctttattacatacacattactttgggaaacagtaaacttttca
ttgatcaaaaatgttaccagtcatataagactgaaaataaagaatagcac
ccttgaaagggagaaagaaagcaaaataaagtaatagtatatttttaaat
gcaatatggaacatagttaagaaactatggtgaaagcagagcttaaataa
actcagttgtttggatttacttgttaatatcaagagctttgaagtcttgg
cttgtattttaatttagtatttttattttgaattttaattcaaaaaagat
ttataaaaatattaaattaaagtttaatgaaacaaatctgttttcttggt
gttttaattatagacacttttgatggtgtgtatattataatttcaattta
tcaaaagaaatacttttcttaatagaaaattatttctatgttaatatatt
agtaactttaaagttacacacatattaagtgtacatttatatacatttgt
ataaatactactttctatatggaatgagtcataataactatttttaatat
aataccttctaataattactcaaataataattaaatgaaattgtgtaggt
taaatttaaaatcaaaaaaaattgataatgagaagatgggatcagccaac
gtgataataatattttagcagcattaacattttgagttgagcccaatatc
cacataaaaaccagctgttagccattaacctcaacactggttaga

gaattcaataagtacactacaatgcatagaaccacagaacttaaatattg
agtaaaggattgggggaaggttggaccaccctaggaagggaaggcaaaat
agctaattacagatgaagggaagcaagtgctagaagtgaaggatcaaatg
gcaagatgacagaaacagggtgagatagggaatacagggattgacagcta
aaactaaaagctattcactgtttttaaaagtgcatgcatgtgtatactaa
tccacatagtgtttatgcagcagtacatattcatacataaaacgaatgaa
atgtttttccaggtcatagaaccctagtcagtaaagatgaaatagaaata
tagtgctaattatgcagtaagattagttctttatacgtctgtccatttgt
gcagaaaaaaatacaggaagagcagagaaaattctaatgataacaggaat
tttatagtgcaccttggatgagctatgtgtaaaaaaaatgccaagtaata
tagatgaaatgagacagtgatacttttcagaatacactgtattgtttaat
tctaaatttgaaaccacactgtgattttcacagtcaaagaggcaaatcag
aaaagtcaacactattcgtcaaaacttctaagtggtatacaaacataaac
aagtgaacccaatcatctgtaagtcatatttctattataaacttatctca
ctgttgctgcacactacctcatgaaagtaacttaatgaaaggggcttatg
ttagttcacagtaggagagcacagtataacttcagtaaggaaggtgtcac
agcatgagaggaagaggaatctagtctgaatgcatctataggaatgttct
tccatggggaagactattacagagtttttcctctggtttgggataagtgt
cttccaaagaggtaagtatcaaagcttgtcttctacataattggtggtta
ggggtgggagtttacacactagaccatttcatttgaaggcttattgggac
cccagtctctcctgttttgattccacttctggagttcatggctcttattc
tattctttaggtttcctaatgatttagtcattactctaagaagttatcaa
gtgccagtactgaataggttaagac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_100711972_100713119
seq2: B6Ng01-305M02.b_43_1187

seq1  GAATTCAAGAGAAAACCTTTGGGCCCTGACTAAGAGCTCTGGTTTGGTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGAGAAAACCTTTGGGCCCTGACTAAGAGCTCTGGTTTGGTGT  50

seq1  CTTTCCAAACTATCTCATTTCATTTTGACTTAAATGCTTTCCGAAATAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCAAACTATCTCATTTCATTTTGACTTAAATGCTTTCCGAAATAGT  100

seq1  CAATTTTGTGTAAATTTCTTTATCTGTAGACTTACTTCTGCATGTTTATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTTGTGTAAATTTCTTTATCTGTAGACTTACTTCTGCATGTTTATT  150

seq1  TTTTCAAAAAGAAAAAAACTCATTACAGTGAACTGAAAAAATAATTACTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAAAAAGAAAAAAACTCATTACAGTGAACTGAAAAAATAATTACTC  200

seq1  AGATTTGGTATTTATGTTATCTAAATATAACATATAATCTAATATACATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTGGTATTTATGTTATCTAAATATAACATATAATCTAATATACATG  250

seq1  TGTATGGGTATACATTTAGTAATAAATGTTCATACAATTCTATCAATAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGGGTATACATTTAGTAATAAATGTTCATACAATTCTATCAATAAT  300

seq1  ACATCATGTGCAAATTAGTGTCTGAATTAATGTTGTGTAGCTGCTGCTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCATGTGCAAATTAGTGTCTGAATTAATGTTGTGTAGCTGCTGCTGG  350

seq1  AAAAAGAAACCTATTTTATTGCACAATAAAATGCTTTTAATTGTTGGAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGAAACCTATTTTATTGCACAATAAAATGCTTTTAATTGTTGGAGT  400

seq1  CGAACAGCTTTATTACATACACATTACTTTGGGAAACAGTAAACTTTTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAACAGCTTTATTACATACACATTACTTTGGGAAACAGTAAACTTTTCA  450

seq1  TTGATCAAAAATGTTACCAGTCATATAAGACTGAAAATAAAGAATAGCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATCAAAAATGTTACCAGTCATATAAGACTGAAAATAAAGAATAGCAC  500

seq1  CCTTGAAAGGGAGAAAGAAAGCAAAATAAAGTAATAGTATATTTTTAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGAAAGGGAGAAAGAAAGCAAAATAAAGTAATAGTATATTTTTAAAT  550

seq1  GCAATATGGAACATAGTTAAGAAACTATGGTGAAAGCAGAGCTTAAATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATATGGAACATAGTTAAGAAACTATGGTGAAAGCAGAGCTTAAATAA  600

seq1  ACTCAGTTGTTTGGATTTACTTGTTAATATCAAGAGCTTTGAAGTCTTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGTTGTTTGGATTTACTTGTTAATATCAAGAGCTTTGAAGTCTTGG  650

seq1  CTTGTATTTTAATTTAGTATTTTTATTTTGAATTTTAATTCAAAAAAGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTATTTTAATTTAGTATTTTTATTTTGAATTTTAATTCAAAAAAGAT  700

seq1  TTATAAAAATATTAAATTAAAGTTTAATGAAACAAATCTGTTTTCTTGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAAAATATTAAATTAAAGTTTAATGAAACAAATCTGTTTTCTTGGT  750

seq1  GTTTTAATTATAGACACTTTTGATGGTGTGTATATTATAATTTCAATTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAATTATAGACACTTTTGATGGTGTGTATATTATAATTTCAATTTA  800

seq1  TCAAAAGAAATACTTTTCTTAATAGAAAATTATTTCTATGTTAATATATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAGAAATACTTTTCTTAATAGAAAATTATTTCTATGTTAATATATT  850

seq1  AGTAACTTTAAAGTTACACACATATTAAGTGTACATTTATATACATTTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAACTTTAAAGTTACACACATATTAAGTGTACATTTATATACATTTGT  900

seq1  ATAAATACTACTTTCTATATGGAATGAGTCATAATAACTATTTTTAATAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATACTACTTTCTATATGGAATGAGTCATAATAACTATTTTTAATAT  950

seq1  AATACCTTCTAATAATTACTCAAATAATAATTTAAATGAAATTGTGTAGG  1000
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  AATACCTTCTAATAATTACTCAAATAATAA-TTAAATGAAATTGTGTAGG  999

seq1  TTAAATTTAAAATC-AAAAAAATTGATAATGAGAAGAT-GGATCAGCCAA  1048
      |||||||||||||| ||||||||||||||||||||||| |||||||||||
seq2  TTAAATTTAAAATCAAAAAAAATTGATAATGAGAAGATGGGATCAGCCAA  1049

seq1  CGTGATA--TATA-TTTAGCAAGCA-TAACATTTTGAGTTTGGAGCCCCA  1094
      |||||||   ||| |||||| |||| ||||||||||||||  ||| ||||
seq2  CGTGATAATAATATTTTAGC-AGCATTAACATTTTGAGTT--GAG-CCCA  1095

seq1  ATATCCACATAAAAACCAGGCTTGGTAGCCCATTAACCTCAACACTGGGT  1144
      |||||||||||||||||||   || ||| ||||||||||||||||| |||
seq2  ATATCCACATAAAAACCAG--CTGTTAG-CCATTAACCTCAACACT-GGT  1141

seq1  TAGA  1148
      ||||
seq2  TAGA  1145


seq1: chr7_100805792_100806918
seq2: B6Ng01-305M02.g_70_1194 (reverse)

seq1  GTCTTAA-CTATTCAGTACT-GCACTTGATAAACTTCTTTGGGAGTTATT  48
      ||||||| |||||||||||| ||||||||| ||||||||   |||| || 
seq2  GTCTTAACCTATTCAGTACTGGCACTTGAT-AACTTCTT--AGAGTAAT-  46

seq1  GGACTAAATCCATTAGGAAAACTAAAG-ATAGAATAAGAGCCATGGAACC  97
       |||||||| |||||||||| |||||| |||||||||||||||| |||| 
seq2  -GACTAAAT-CATTAGGAAACCTAAAGAATAGAATAAGAGCCAT-GAACT  93

seq1  TCAGAAGTGAAATCAAAACAGGAGAGGACTGGGGTCCCAATAAGCCTTTC  147
       |||||||| ||||||||||||||| ||||||||||||||||||||||  
seq2  CCAGAAGTGGAATCAAAACAGGAGA-GACTGGGGTCCCAATAAGCCTTCA  142

seq1  AATGGAATGGGTCTAGTGTGTAAACT-CCACCC--TACCACCAATTATGT  194
      |||| ||| ||||||||||||||||| ||||||   ||||||||||||||
seq2  AATGAAAT-GGTCTAGTGTGTAAACTCCCACCCCTAACCACCAATTATGT  191

seq1  AGAAGACAAGCTTTGATACTTACCTCTTTGGAAGACACTTAT-CCAAACC  243
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AGAAGACAAGCTTTGATACTTACCTCTTTGGAAGACACTTATCCCAAACC  241

seq1  AGAGGAAAAACTCTGTAATAGTCTTCCCCATGGAAGAACATTCCTATAGA  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAAAAACTCTGTAATAGTCTTCCCCATGGAAGAACATTCCTATAGA  291

seq1  TGCATTCAGACTAGATTCCTCTTCCTCTCATGCTGTGACACCTTCCTTAC  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTCAGACTAGATTCCTCTTCCTCTCATGCTGTGACACCTTCCTTAC  341

seq1  TGAAGTTATACTGTGCTCTCCTACTGTGAACTAACATAAGCCCCTTTCAT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTTATACTGTGCTCTCCTACTGTGAACTAACATAAGCCCCTTTCAT  391

seq1  TAAGTTACTTTCATGAGGTAGTGTGCAGCAACAGTGAGATAAGTTTATAA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTACTTTCATGAGGTAGTGTGCAGCAACAGTGAGATAAGTTTATAA  441

seq1  TAGAAATATGACTTACAGATGATTGGGTTCACTTGTTTATGTTTGTATAC  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAATATGACTTACAGATGATTGGGTTCACTTGTTTATGTTTGTATAC  491

seq1  CACTTAGAAGTTTTGACGAATAGTGTTGACTTTTCTGATTTGCCTCTTTG  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTAGAAGTTTTGACGAATAGTGTTGACTTTTCTGATTTGCCTCTTTG  541

seq1  ACTGTGAAAATCACAGTGTGGTTTCAAATTTAGAATTAAACAATACAGTG  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGAAAATCACAGTGTGGTTTCAAATTTAGAATTAAACAATACAGTG  591

seq1  TATTCTGAAAAGTATCACTGTCTCATTTCATCTATATTACTTGGCATTTT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTGAAAAGTATCACTGTCTCATTTCATCTATATTACTTGGCATTTT  641

seq1  TTTTACACATAGCTCATCCAAGGTGCACTATAAAATTCCTGTTATCATTA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACACATAGCTCATCCAAGGTGCACTATAAAATTCCTGTTATCATTA  691

seq1  GAATTTTCTCTGCTCTTCCTGTATTTTTTTCTGCACAAATGGACAGACGT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTTCTCTGCTCTTCCTGTATTTTTTTCTGCACAAATGGACAGACGT  741

seq1  ATAAAGAACTAATCTTACTGCATAATTAGCACTATATTTCTATTTCATCT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGAACTAATCTTACTGCATAATTAGCACTATATTTCTATTTCATCT  791

seq1  TTACTGACTAGGGTTCTATGACCTGGAAAAACATTTCATTCGTTTTATGT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGACTAGGGTTCTATGACCTGGAAAAACATTTCATTCGTTTTATGT  841

seq1  ATGAATATGTACTGCTGCATAAACACTATGTGGATTAGTATACACATGCA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATATGTACTGCTGCATAAACACTATGTGGATTAGTATACACATGCA  891

seq1  TGCACTTTTAAAAACAGTGAATAGCTTTTAGTTTTAGCTGTCAATCCCTG  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACTTTTAAAAACAGTGAATAGCTTTTAGTTTTAGCTGTCAATCCCTG  941

seq1  TATTCCCTATCTCACCCTGTTTCTGTCATCTTGCCATTTGATCCTTCACT  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCCCTATCTCACCCTGTTTCTGTCATCTTGCCATTTGATCCTTCACT  991

seq1  TCTAGCACTTGCTTCCCTTCATCTGTAATTAGCTATTTTGCCTTCCCTTC  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGCACTTGCTTCCCTTCATCTGTAATTAGCTATTTTGCCTTCCCTTC  1041

seq1  CTAGGGTGGTCCAACCTTCCCCCAATCCTTTACTCAATATTTAAGTTCTG  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGGTGGTCCAACCTTCCCCCAATCCTTTACTCAATATTTAAGTTCTG  1091

seq1  TGGTTCTATGCATTGTAGTGTACTTATTGAATTC  1127
      ||||||||||||||||||||||||||||||||||
seq2  TGGTTCTATGCATTGTAGTGTACTTATTGAATTC  1125


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