BAC Information

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BAC

Clone NameB6Ng01-306E17
Chromosome7 (Build37)
Map Location 110,191,408 - 110,317,075
singlet/doubletdoublet
Overlap geneOlfr583, Olfr584, Olfr585, Olfr586, Olfr587-ps1, Olfr588-ps1, Olfr589, Olfr590-ps1
Upstream geneRnf121, Trpc2, Art5, Art1, Chrna10, Nup98, Frag1, Rhog, Stim1, Rrm1, Olfr543, Olfr544, Olfr545, LOC667284, Olfr547, Olfr548-ps1, Olfr549, Trim21, LOC384699, Olfr550, Olfr551, Olfr552, Olfr553, Olfr554, LOC100040840, Olfr555, Olfr556, Trim68, Olfr557, Olfr558, Olfr33, Olfr559, Olfr78, Olfr560, Olfr561, Olfr562-ps1, Olfr563-ps1, Olfr564, Olfr565-ps1, Olfr566, GA_x5J8B7W5P47-379997-380552, Olfr567-ps1, Olfr568, Olfr569, Olfr570, Olfr571, Olfr572, Olfr573-ps1, Olfr574, Olfr575, Olfr576, Olfr577, Olfr578, Olfr1527-ps1, Olfr579-ps1, Olfr580-ps1, Olfr581-ps1, Olfr582
Downstream geneOlfr591, Olfr592, Olfr593, Olfr594, Olfr595-ps1, Usp17, Dub2a, LOC100041187, Olfr597, GA_x5J8B7TU1BB-380-666, Olfr598, Olfr599, Olfr600, Olfr601, Olfr602-ps1, Olfr604, Olfr596-ps1, Dub2, Olfr605, Olfr606, EG546989, Olfr608, Olfr609, Olfr610, Olfr611, EG545985, Olfr614, Olfr615, Olfr616, LOC100042167, Olfr617, Olfr618, Olfr619, Olfr620, LOC667639, Olfr622, Olfr623, Olfr624, Olfr625-ps1, Olfr261-ps1, Olfr260-ps1, Olfr627, Olfr1526-ps1, Olfr629, Olfr630, Olfr69, Olfr68, Olfr67, Hbb-b1, EG436003, Hbb-bh1, Hbb-y, Olfr66, Olfr64, Olfr65, Olfr631, Olfr632, Olfr633, Olfr634-ps1, LOC233614, Olfr635, Olfr636-ps1, Olfr637-ps1, Olfr638, Olfr639, Olfr640, Olfr641, Olfr642, Olfr643, Olfr644, Olfr645, Olfr646, 4931431F19Rik, Ubqln3, Ubqlnl, E030002O03Rik, Olfr647-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-306E17.bB6Ng01-306E17.g
ACCGA099370GA099371
length1,149698
definitionB6Ng01-306E17.b B6Ng01-306E17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(110,315,928 - 110,317,075)(110,191,408 - 110,192,100)
sequence
gaattcataacttcttagaaaatatcattatcagggaggatgtgggtgtt
ttatttaaatcactgtattcttaacaagggatcaagtctctgcacctgct
taagacgtatctgaagctagcacaataagtaaaagtgtctttatgtttca
gtaccagatacataggtgtggagtggcaatgatatgctgagggaacctta
gaaacataggtcctggactcaaccgtggaataggaattgaggggaaattg
acgctgaagtagactaaagagtggagtagatactgacaaagatcctctga
catatcctacaacctacacagaggtaaataaataggactacaaatctact
aaagatgacattcatatctggacgtaatgaatggactgagtgctcaagta
cttattaaaaaaatcaaacctgcacatagaagcctaacagtaaatgccag
ggccagatggctacacttacaaagctatcaaacataccaaaacatgttta
tcatatggaaatgatatgagagtaaaggtttcttatctaaccaagggact
agcagtaaaacttcaaggttattccataaactgaataaaacatagataaa
ggaggacagaaatagttctatcagtcattaaagtccttaaagagtcacat
ttatgtctaattacacagcatgactgtggagtgatttccctgagaatatc
tagtttaattgtagcatgattgacaaaataacttgatatgatttcgtccc
tgaagtttgttctacagaataagtatgtcatgaaaagttcaaaaaagatg
tttggaagccaatctcatctcaaaatggcaagtgggcctttgcggtttac
aaatttgtacaggttttgagataaattcttactagaaagttaggctttat
cagaatttcaccaagattttttttggcctggaaattttattaacataatg
ccatttatgttacacagatctagatacctggatgatatactggactcatt
caatgaaactgttcaaaacaaagcccaagatagtgctgacttgccatcca
ttggactcaacattatataaatagtgacaccctctcactgggaatgacat
ctatagcctgacaacacaaacagtctttggaaaggacatatttaatttc
gaattcaaaatctggagacttttcatggattaaatcagtaaatattttac
ctagttgtcattgttcatttggaaggttgcacaattttcaatgaatctag
acatttcatcaagcagttaaaatatacgcatttcttcaaactaatctcta
cataaaatattattttataaatagacatatgttcaaagttatttttaaat
ctgatctacaaaatcaacataaatcatacctgtcatcctataggaagtga
gtgtcatggcacgtgacaagaatcacagcaacagggaatccgaggcggga
gcactgtgaatttgagaccagtctagaatacatagaaaaattttatccca
ataaaataaaatgaaagtagataggaaggttagagggagggagagaataa
aaggaggggcaatggaagaaaggaataatgagaaggagagaagaaaatac
aagtgggaaggaggaagaggagaaaataaatgaaaccaatgacgaaatgt
gattggacaccaggtgccattttatttgtagtaaagacttgatgaactat
tgatatgctttaagttttaaagaaaattaaatttagttaccatcatactc
catactattctattaaaatgaatgcacatatatggaagctttggaagata
tctaaaatactaaaattacctactcttagttaaaaaagataagggttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_110315928_110317075
seq2: B6Ng01-306E17.b_46_1194 (reverse)

seq1  GAAAT--AATATGTCCTTTTCAAAGACTGTTTTGTTTGTAAGGTTTATTA  48
      |||||  |||||||||||| ||||||||||||   |||| ||| |    |
seq2  GAAATTAAATATGTCCTTTCCAAAGACTGTTTGTGTTGTCAGGCTATAGA  50

seq1  TGTTCCATCCCAGT---AGAGTGTCACTA-TTATATAATGTTGAAGTCCA  94
      || ||  |||||||   || ||||||||| ||||||||||||| ||||||
seq2  TG-TCATTCCCAGTGAGAGGGTGTCACTATTTATATAATGTTG-AGTCCA  98

seq1  AT-GATGGCAAGTCCAGCACTATCTTTGGCTTTGTTT--GACAGTTTCAT  141
      || |||||||||| |||||||||||| ||||||||||   ||||||||||
seq2  ATGGATGGCAAGT-CAGCACTATCTTGGGCTTTGTTTTGAACAGTTTCAT  147

seq1  TGAAATGAGTCCAGTTAATATCATCCAGGTTATCTAGATCTGTGTAACAT  191
      || ||||||||||||  |||||||||||| ||||||||||||||||||||
seq2  TG-AATGAGTCCAGT--ATATCATCCAGG-TATCTAGATCTGTGTAACAT  193

seq1  AAATGGCATTATGTTAATAAAATTTCCAGGCCAAAAAAAATCTTGGTGAA  241
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGCATTATGTTAATAAAATTTCCAGGCCAAAAAAAATCTTGGTGAA  243

seq1  ATTCTGATAAAGCCTAACTTTCTAGTAAGAATTTTATCTCAAAACCTGTA  291
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  ATTCTGATAAAGCCTAACTTTCTAGTAAGAA-TTTATCTCAAAACCTGTA  292

seq1  CAAATTTGTAAACCGCAAAGGCCCACTTGCCATTTTGAGATGAGATTGGC  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTTGTAAACCGCAAAGGCCCACTTGCCATTTTGAGATGAGATTGGC  342

seq1  TTCCAAACATCTTTTTTGAACTTTTCATGACATACTTATTCTGTAGAACA  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAAACATCTTTTTTGAACTTTTCATGACATACTTATTCTGTAGAACA  392

seq1  AACTTCAGGGACGAAATCATATCAAGTTATTTTGTCAATCATGCTACAAT  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCAGGGACGAAATCATATCAAGTTATTTTGTCAATCATGCTACAAT  442

seq1  TAAACTAGATATTCTCAGGGAAATCACTCCACAGTCATGCTGTGTAATTA  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTAGATATTCTCAGGGAAATCACTCCACAGTCATGCTGTGTAATTA  492

seq1  GACATAAATGTGACTCTTTAAGGACTTTAATGACTGATAGAACTATTTCT  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATAAATGTGACTCTTTAAGGACTTTAATGACTGATAGAACTATTTCT  542

seq1  GTCCTCCTTTATCTATGTTTTATTCAGTTTATGGAATAACCTTGAAGTTT  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTCCTTTATCTATGTTTTATTCAGTTTATGGAATAACCTTGAAGTTT  592

seq1  TACTGCTAGTCCCTTGGTTAGATAAGAAACCTTTACTCTCATATCATTTC  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGCTAGTCCCTTGGTTAGATAAGAAACCTTTACTCTCATATCATTTC  642

seq1  CATATGATAAACATGTTTTGGTATGTTTGATAGCTTTGTAAGTGTAGCCA  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGATAAACATGTTTTGGTATGTTTGATAGCTTTGTAAGTGTAGCCA  692

seq1  TCTGGCCCTGGCATTTACTGTTAGGCTTCTATGTGCAGGTTTGATTTTTT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCCCTGGCATTTACTGTTAGGCTTCTATGTGCAGGTTTGATTTTTT  742

seq1  TAATAAGTACTTGAGCACTCAGTCCATTCATTACGTCCAGATATGAATGT  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAGTACTTGAGCACTCAGTCCATTCATTACGTCCAGATATGAATGT  792

seq1  CATCTTTAGTAGATTTGTAGTCCTATTTATTTACCTCTGTGTAGGTTGTA  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTTAGTAGATTTGTAGTCCTATTTATTTACCTCTGTGTAGGTTGTA  842

seq1  GGATATGTCAGAGGATCTTTGTCAGTATCTACTCCACTCTTTAGTCTACT  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATGTCAGAGGATCTTTGTCAGTATCTACTCCACTCTTTAGTCTACT  892

seq1  TCAGCGTCAATTTCCCCTCAATTCCTATTCCACGGTTGAGTCCAGGACCT  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCGTCAATTTCCCCTCAATTCCTATTCCACGGTTGAGTCCAGGACCT  942

seq1  ATGTTTCTAAGGTTCCCTCAGCATATCATTGCCACTCCACACCTATGTAT  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTCTAAGGTTCCCTCAGCATATCATTGCCACTCCACACCTATGTAT  992

seq1  CTGGTACTGAAACATAAAGACACTTTTACTTATTGTGCTAGCTTCAGATA  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTACTGAAACATAAAGACACTTTTACTTATTGTGCTAGCTTCAGATA  1042

seq1  CGTCTTAAGCAGGTGCAGAGACTTGATCCCTTGTTAAGAATACAGTGATT  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCTTAAGCAGGTGCAGAGACTTGATCCCTTGTTAAGAATACAGTGATT  1092

seq1  TAAATAAAACACCCACATCCTCCCTGATAATGATATTTTCTAAGAAGTTA  1141
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAAAACACCCACATCCTCCCTGATAATGATATTTTCTAAGAAGTTA  1142

seq1  TGAATTC  1148
      |||||||
seq2  TGAATTC  1149

seq1: chr7_110191408_110192100
seq2: B6Ng01-306E17.g_64_761

seq1  GAATTCAAAATCTGGAGACTTTTCATGGATTAAATCAGTAAATATTTTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAATCTGGAGACTTTTCATGGATTAAATCAGTAAATATTTTAC  50

seq1  CTAGTTGTCATTGTTCATTTGGAAGGTTGCACAATTTTCAATGAATCTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTGTCATTGTTCATTTGGAAGGTTGCACAATTTTCAATGAATCTAG  100

seq1  ACATTTCATCAAGCAGTTAAAATATACGCATTTCTTCAAACTAATCTCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTCATCAAGCAGTTAAAATATACGCATTTCTTCAAACTAATCTCTA  150

seq1  CATAAAATATTATTTTATAAATAGACATATGTTCAAAGTTATTTTTAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAATATTATTTTATAAATAGACATATGTTCAAAGTTATTTTTAAAT  200

seq1  CTGATCTACAAAATCAACATAAATCATACCTGTCATCCTATAGGAAGTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATCTACAAAATCAACATAAATCATACCTGTCATCCTATAGGAAGTGA  250

seq1  GTGTCATGGCACGTGACAAGAATCACAGCAACAGGGAATCCGAGGCGGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCATGGCACGTGACAAGAATCACAGCAACAGGGAATCCGAGGCGGGA  300

seq1  GCACTGTGAATTTGAGACCAGTCTAGAATACATAGAAAAATTTTATCCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTGTGAATTTGAGACCAGTCTAGAATACATAGAAAAATTTTATCCCA  350

seq1  ATAAAATAAAATGAAAGTAGATAGGAAGGTTAGAGGGAGGGAGAGAATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATAAAATGAAAGTAGATAGGAAGGTTAGAGGGAGGGAGAGAATAA  400

seq1  AAGGAGGGGCAATGGAAGAAAGGAATAATGAGAAGGAGAGAAGAAAATAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGGGGCAATGGAAGAAAGGAATAATGAGAAGGAGAGAAGAAAATAC  450

seq1  AAGTGGGAAGGAGGAAGAGGAGAAAATAAATGAAACCAATGACGAAATGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGGAAGGAGGAAGAGGAGAAAATAAATGAAACCAATGACGAAATGT  500

seq1  GATTGGACACCAGGTGCCATTTTATTTGTAGTAAAGACTTGATGAACTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGGACACCAGGTGCCATTTTATTTGTAGTAAAGACTTGATGAACTAT  550

seq1  TGATATGCTTTAAGTTTTAAAG-AAATTAAATTTAGTTACCATCATACTC  599
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TGATATGCTTTAAGTTTTAAAGAAAATTAAATTTAGTTACCATCATACTC  600

seq1  CATACTA-TCTA-TAAAATGAATGCACATATATGGAAGCTTTGGAAGATA  647
      ||||||| |||| |||||||||||||||||||||||||||||||||||||
seq2  CATACTATTCTATTAAAATGAATGCACATATATGGAAGCTTTGGAAGATA  650

seq1  TCT-AAATACTAAAAATACCCACTC-TAGTTAATAAAGATAAGGGTCT  693
      ||| ||||||||||| |||| |||| ||||||| |||||||||||| |
seq2  TCTAAAATACTAAAATTACCTACTCTTAGTTAAAAAAGATAAGGGTTT  698