BAC Information

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BAC

Clone NameB6Ng01-306M16
Chromosome7 (Build37)
Map Location 101,789,700 - 101,921,553
singlet/doubletdoublet
Overlap geneEG666816
Upstream geneEG638305, EG545982
Downstream geneLOC100040132, LOC666823
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-306M16.bB6Ng01-306M16.g
ACCGA099732GA099733
length1,1471,106
definitionB6Ng01-306M16.b B6Ng01-306M16.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(101,920,389 - 101,921,553)(101,789,700 - 101,790,806)
sequence
gaattctattctcttatttgtaatagctgcacaagattttcctcatactt
tactttttgagcaaaaccatcctttaaaattctaagagcactttagtatt
tttaggctttatattaactggaatggataaaagactgtgctatctcctag
aaggcaaataggcaaaaactgccagtgatgtcacagaaataatagtgaca
tcagagaaaagatattatgtaaatctcaccatttcataaaggcagagtag
aaactcaattcaattccattatttcccagtcgtatagtctttccagagga
gcatcagatactactgtctccttggatacaaaagtgttttcctttcttgg
aaaacacttgcagaaaataaacaaaactgatatgctagcatacacaatat
aggaaactcaaagacaatcccccttttatctgtaaaaaatattagtttga
tcttagccaaactatccattgccagcatcccaagaaacaaacataatgct
tttaaatgaactgcagcaagctgtcacatcaatattctcctaaagacctc
caacatgtctccaagcattagactattctggctcctcaattaagactaaa
tattttcaacttactcaaaatatttcctcctattttacaactgaatatct
ccttacattttctttccctcttccacataccatttttttttaagtttcag
ggtgtgtgagtgtggcatctgtgtcatttgatattggctcattcctgtgt
gcttattggctagaagggaacattatgtgtcatgctggactcctctctac
ctcttctcttgacacaggggctgtcactgaggtaggttggttacaaacaa
gcttcagttttcactctgtccttgcttgtacacccaagactggaatggca
gataagtatttgcccatgatagttttgcatgtagatcctgagatctgact
cagtcttcatatacattgaacatttttcatgatttctataacaactttga
tttaattcagcactacacacacagcactcacacacacactcaccaccatc
actcacggcacacacacattttatatatgcaattcaagtaatctacatgc
caccatagaatgtccatgtatgctcactcaggtccttataaatgtat
gaattctctgtacctgtcaaaaaaaaaaaaaaaaaaaaaaagaaaagaaa
agcctgcacctaataagtgaatctcattgatgttacaccccagttggttc
cacttgacctcaggtcttcctcttcaacaatttaaatattatttaaaatt
tgtaatgacttcaaaggaatgagatgattggcatctggttcttagtattg
ctgccgtacattatctgtcatgattaggcagtcctggtcttccaacatca
cagataaaaactctgatttggtaacccaatatttactatagtgtccttta
attgataggagcatgactctgagctgagggattagagaagttcctgaaag
gaaagagaacaatcagtagtccttgaaaccaccttcttagacactgtatc
caagggtaagagggaaaagaataaatgtgtttatatcaaaggatgaaagg
acatagaataaatgagtttgcttcattttaccaataatgactatgtatgg
ttaagttttctttcatttctgccctttagaatatatcatcaccatcatca
tcatcaccatcatcatttgagcaacaattctcaaatgattaagtaagatt
tgagattaaatttaggaaattctaaacaatgtctcaattaacagtattag
tatttcctcaagtatgtgcattgttctctttatagtacacaagaatcgtt
cttgaggttagagcatgattatacgttgaaagtaaatacaattgctttgg
ggaccaaaaggtctgcctaatcctgattcagttccatataagcaaagagc
tgtctcatcctgaatcagttctgcataagcagggtacagtcaacatgaaa
ggcatgggaatgtccaaataagacattatcctgacaatcatattatcagt
tctccttctagaaagtgaagatacagtagaagtaatcagcgtcctctttt
tcaataggattggaattcatcatgatgaggagggcacaaatgcataaagg
acaggtgagctaatacactaaaacaaaacaacaccagaaaaaggtagtca
taagagtctctttcatggaaccaggtgtattctacaagcaaacacagcct
taggac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_101920389_101921553
seq2: B6Ng01-306M16.b_49_1195 (reverse)

seq1  ATACATTTATTATGAACACTGAGTGAGCATTACATTGAGAACTATCTTAT  50
      |||||||||| | ||   ||||||||||| ||||| ||     ||  |||
seq2  ATACATTTATAAGGA--CCTGAGTGAGCA-TACATGGA----CATTCTAT  43

seq1  GGTGGGCATGTAGATTACCTGGAAATGCATATATAAAATGTGTGTGTG-C  99
      ||| ||||||||||||| || ||| ||||||||||||||||||||||| |
seq2  GGT-GGCATGTAGATTA-CTTGAATTGCATATATAAAATGTGTGTGTGCC  91

seq1  GTGTGTG-TGTGTGTGTGTGTGTGTGTGTGTG-TGTGTGTGTAAGTTGGC  147
      ||| ||| ||   ||| ||||||||||| ||| ||||||||| |||  ||
seq2  GTGAGTGATGGTGGTGAGTGTGTGTGTGAGTGCTGTGTGTGT-AGT--GC  138

seq1  TGGATTTAAAATTCAAAAGTTGTTTATAGAAATCATGGAAAAATGGTTCA  197
      || |||  ||||   ||||||| ||||||||||||| ||||||| |||||
seq2  TGAATT--AAAT--CAAAGTTG-TTATAGAAATCAT-GAAAAAT-GTTCA  181

seq1  ATGTATATGAAGACCTGAGTTCAGATCTCAGGATCTACATGCAAAACTAT  247
      ||||||||||||| ||||| ||||||||||||||||||||||||||||||
seq2  ATGTATATGAAGA-CTGAG-TCAGATCTCAGGATCTACATGCAAAACTAT  229

seq1  CATGGGCAAATACTTATCTGCCATTCCAGTCTTGGGTGTACAAGCAAGGA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGGCAAATACTTATCTGCCATTCCAGTCTTGGGTGTACAAGCAAGGA  279

seq1  CAGAGTGAAAACTGAAGCTTGTTTGTAACCAACCTACCTCAGTGACAGCC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTGAAAACTGAAGCTTGTTTGTAACCAACCTACCTCAGTGACAGCC  329

seq1  CCTGTGTCAAGAGAAGAGGTAGAGAGGAGTCCAGCATGACACATAATGTT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGTCAAGAGAAGAGGTAGAGAGGAGTCCAGCATGACACATAATGTT  379

seq1  CCCTTCTAGCCAATAAGCACACAGGAATGAGCCAATATCAAATGACACAG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTCTAGCCAATAAGCACACAGGAATGAGCCAATATCAAATGACACAG  429

seq1  ATGCCACACTCACACACCCTGAAACTTAAAAAAAAATGGTATGTGGAAGA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCACACTCACACACCCTGAAACTTAAAAAAAAATGGTATGTGGAAGA  479

seq1  GGGAAAGAAAATGTAAGGAGATATTCAGTTGTAAAATAGGAGGAAATATT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAAGAAAATGTAAGGAGATATTCAGTTGTAAAATAGGAGGAAATATT  529

seq1  TTGAGTAAGTTGAAAATATTTAGTCTTAATTGAGGAGCCAGAATAGTCTA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTAAGTTGAAAATATTTAGTCTTAATTGAGGAGCCAGAATAGTCTA  579

seq1  ATGCTTGGAGACATGTTGGAGGTCTTTAGGAGAATATTGATGTGACAGCT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTGGAGACATGTTGGAGGTCTTTAGGAGAATATTGATGTGACAGCT  629

seq1  TGCTGCAGTTCATTTAAAAGCATTATGTTTGTTTCTTGGGATGCTGGCAA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCAGTTCATTTAAAAGCATTATGTTTGTTTCTTGGGATGCTGGCAA  679

seq1  TGGATAGTTTGGCTAAGATCAAACTAATATTTTTTACAGATAAAAGGGGG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATAGTTTGGCTAAGATCAAACTAATATTTTTTACAGATAAAAGGGGG  729

seq1  ATTGTCTTTGAGTTTCCTATATTGTGTATGCTAGCATATCAGTTTTGTTT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTCTTTGAGTTTCCTATATTGTGTATGCTAGCATATCAGTTTTGTTT  779

seq1  ATTTTCTGCAAGTGTTTTCCAAGAAAGGAAAACACTTTTGTATCCAAGGA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTGCAAGTGTTTTCCAAGAAAGGAAAACACTTTTGTATCCAAGGA  829

seq1  GACAGTAGTATCTGATGCTCCTCTGGAAAGACTATACGACTGGGAAATAA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGTAGTATCTGATGCTCCTCTGGAAAGACTATACGACTGGGAAATAA  879

seq1  TGGAATTGAATTGAGTTTCTACTCTGCCTTTATGAAATGGTGAGATTTAC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATTGAATTGAGTTTCTACTCTGCCTTTATGAAATGGTGAGATTTAC  929

seq1  ATAATATCTTTTCTCTGATGTCACTATTATTTCTGTGACATCACTGGCAG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATATCTTTTCTCTGATGTCACTATTATTTCTGTGACATCACTGGCAG  979

seq1  TTTTTGCCTATTTGCCTTCTAGGAGATAGCACAGTCTTTTATCCATTCCA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGCCTATTTGCCTTCTAGGAGATAGCACAGTCTTTTATCCATTCCA  1029

seq1  GTTAATATAAAGCCTAAAAATACTAAAGTGCTCTTAGAATTTTAAAGGAT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATATAAAGCCTAAAAATACTAAAGTGCTCTTAGAATTTTAAAGGAT  1079

seq1  GGTTTTGCTCAAAAAGTAAAGTATGAGGAAAATCTTGTGCAGCTATTACA  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTGCTCAAAAAGTAAAGTATGAGGAAAATCTTGTGCAGCTATTACA  1129

seq1  AATAAGAGAATAGAATTC  1165
      ||||||||||||||||||
seq2  AATAAGAGAATAGAATTC  1147

seq1: chr7_101789700_101790806
seq2: B6Ng01-306M16.g_67_1172

seq1  GAATTCTCTGTACCTGTCAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGTACCTGTCAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAA  50

seq1  AGCCTGCACCTAATAAGTGAATCTCATTGATGTTACACCCCAGTTGGTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGCACCTAATAAGTGAATCTCATTGATGTTACACCCCAGTTGGTTC  100

seq1  CACTTGACCTCAGGTCTTCCTCTTCAACAATTTAAATATTATTTAAAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGACCTCAGGTCTTCCTCTTCAACAATTTAAATATTATTTAAAATT  150

seq1  TGTAATGACTTCAAAGGAATGAGATGATTGGCATCTGGTTCTTAGTATTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATGACTTCAAAGGAATGAGATGATTGGCATCTGGTTCTTAGTATTG  200

seq1  CTGCCGTACATTATCTGTCATGATTAGGCAGTCCTGGTCTTCCAACATCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCGTACATTATCTGTCATGATTAGGCAGTCCTGGTCTTCCAACATCA  250

seq1  CAGATAAAAACTCTGATTTGGTAACCCAATATTTACTATAGTGTCCTTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATAAAAACTCTGATTTGGTAACCCAATATTTACTATAGTGTCCTTTA  300

seq1  ATTGATAGGAGCATGACTCTGAGCTGAGGGATTAGAGAAGTTCCTGAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATAGGAGCATGACTCTGAGCTGAGGGATTAGAGAAGTTCCTGAAAG  350

seq1  GAAAGAGAACAATCAGTAGTCCTTGAAACCACCTTCTTAGACACTGTATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAGAACAATCAGTAGTCCTTGAAACCACCTTCTTAGACACTGTATC  400

seq1  CAAGGGTAAGAGGGAAAAGAATAAATGTGTTTATATCAAAGGATGAAAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGTAAGAGGGAAAAGAATAAATGTGTTTATATCAAAGGATGAAAGG  450

seq1  ACATAGAATAAATGAGTTTGCTTCATTTTACCAATAATGACTATGTATGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGAATAAATGAGTTTGCTTCATTTTACCAATAATGACTATGTATGG  500

seq1  TTAAGTTTTCTTTCATTTCTGCCCTTTAGAATATATCATCACCATCATCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTTTTCTTTCATTTCTGCCCTTTAGAATATATCATCACCATCATCA  550

seq1  TCATCACCATCATCATTTGAGCAACAATTCTCAAATGATTAAGTAAGATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCACCATCATCATTTGAGCAACAATTCTCAAATGATTAAGTAAGATT  600

seq1  TGAGATTAAATTTAGGAAATTCTAAACAATGTCTCAATTAACAGTATTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATTAAATTTAGGAAATTCTAAACAATGTCTCAATTAACAGTATTAG  650

seq1  TATTTCCTCAAGTATGTGCATTGTTCTCTTTATAGTACACAAGAATCGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCCTCAAGTATGTGCATTGTTCTCTTTATAGTACACAAGAATCGTT  700

seq1  CTTGAGGTTAGAGCATGATTATACGTTGAAAGTAAATACAATTGCTTTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGGTTAGAGCATGATTATACGTTGAAAGTAAATACAATTGCTTTGG  750

seq1  GGACCAAAAGGTCTGCCTAATCCTGATTCAGTTCCATATAAGCAAAGAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCAAAAGGTCTGCCTAATCCTGATTCAGTTCCATATAAGCAAAGAGC  800

seq1  TGTCTCATCCTGAATCAGTTCTGCATAAGCA-GGTACAGTCAACATGAAA  849
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TGTCTCATCCTGAATCAGTTCTGCATAAGCAGGGTACAGTCAACATGAAA  850

seq1  GGCATGGGAATGTCCAAATAAGACATTATCCTGACAATCATATTATCAGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGGGAATGTCCAAATAAGACATTATCCTGACAATCATATTATCAGT  900

seq1  TCTCCTTCTAGAAAGTGAAGATACAGTAGAAGTAATCAGCGTCCTC-TTT  948
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TCTCCTTCTAGAAAGTGAAGATACAGTAGAAGTAATCAGCGTCCTCTTTT  950

seq1  TCAATA-GATT-GAATTCATCATGATGAGGAAGGCAACAAATGCATAAAA  996
      |||||| |||| ||||||||||||||||||| ||| ||||||||||||| 
seq2  TCAATAGGATTGGAATTCATCATGATGAGGAGGGC-ACAAATGCATAAAG  999

seq1  GACAGGTGAAGCTAAATACACTAAAACAAAAC-ACACCAGAAAAAGGTAG  1045
      |||||||| |||| |||||||||||||||||| |||||||||||||||||
seq2  GACAGGTG-AGCT-AATACACTAAAACAAAACAACACCAGAAAAAGGTAG  1047

seq1  TCATAAGAGTCTCCTTTCAT-GAAACAAGTGTATTCTACCAAAGCCAAAC  1094
      |||||||||||| ||||||| ||| || |||||||||||  ||| |||||
seq2  TCATAAGAGTCT-CTTTCATGGAACCAGGTGTATTCTAC--AAG-CAAAC  1093

seq1  ACAGCTTTAGGAC  1107
      ||||| |||||||
seq2  ACAGCCTTAGGAC  1106