BAC Information

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BAC

Clone NameB6Ng01-306P16
Chromosome7 (Build37)
Map Location 137,428,928 - 137,454,496
singlet/doubletdoublet
Overlap genenone
Upstream genePpapdc1a, Brwd2, LOC100043150, Fgfr2
Downstream geneLOC546005, Ate1, LOC100043163, Nsmce4a, Tacc2, LOC619876, Btbd16, EG434249, Plekha1, Htra1, Dmbt1, 4933402N03Rik, 5430419D17Rik, LOC546006, LOC100043173, Cuzd1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-306P16.bB6Ng01-306P16.g
ACCGA099874GA099875
length9931,007
definitionB6Ng01-306P16.b B6Ng01-306P16.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(137,453,501 - 137,454,496)(137,428,928 - 137,429,927)
sequence
gaattccagtcaagacatgaggtaactccagcagggtctccccagcagat
cagtggtccaaacagaagatactgggcctggtatggtgattgacatctgt
cagagggcaagagtatccatgacattttatcaaactcagcaagtcttgat
agtatatgtttaaaatcctagcacctaagagttgaggctggagagtcacc
aggagtttaaggctagcctatactatatagtgagtttcaggctagtctgg
cagtctggactataagagtgttatcctgtcttaaaaagtaaaataatagc
tgggcagtggtggcacacgcctttaatcccagcacttgggaggcagaggc
aggcagatttctgagtttgaggccagcctggtctactaagtgagctccag
gacagtcagggctacacagagaaaccctgcctcagaaaaataaaataaaa
taaaataaaataaaataaaataaaatcataaaagattatattaggctcac
gatgcaagtaatcatataaatattaaaagcatacatttaagcagaaggga
gatgcagggtgggatcaggtgttactcctaacccaagtctccttggtctg
tccatgctttcactatttttgaaacagaagcagggaatcgctgccctgct
taggttccccaggggaaccaaggtgtggaacgagccctgcagtcgatgag
gagggcctggcacagccctgtgctcccacagccacagaaggaattaacaa
gtgttctgattcagttttccaggcgccgtgctgtgggctgacctcctgga
atgtcccttcaatgacttgtgcaaatagtcttccaaaatcaatagactgc
aaaatctatctggctcgtgaaatcttccttggtcctcttgacatccgatc
actgtccccaccctcagctctgcattcaagactccctccacaccggactg
tttgttgggtaggcacattgcaggtgagggggggggggtgggg
gaattccagggattgaagacagtagacctaacctgcataccttgacccac
atgaccgctgcagtagaactccaggctaactggctcagcatccaggtgcc
tccagaaactgtataaaataaataaattagcacacagctttaatccctct
ggctagaatacggacaagtccttattactcacctgcaatcccaaacaatg
aaggtaaagttagtttgtagaaggaagcagccatgtttgaaagtgatgtc
taattgagtggcagaaaaagggacgaatcaaagaaagatttgacagaata
gggtacgcccaactctcaagagaaaagagaggagggggaaactactcaag
ggagagacagacagtacaggaggaagagggtacagtacaggaatacagta
gacaaacagtacaaacagtacagggatacagtagacacacagtacaaaca
gtacagggatacagtagaggtcctggagaacagggcagtagagttgagag
ggagaggagagcagcacagagagaaagaaggaggcagtgttaccaggaga
gttttacagagacagattggggagagagcaagctagacacaggtaaagaa
caatagaacgaggagccagaagatgagaagacattgctagagttggtttg
agatcaagcagagcaattcagaagaagccgagagagaagccaggttggat
ccgtccactgggagaggagctggagccagaacagctgagttaaaccagcc
agcaaaagatcaggaaaaactagaaagggtgggtttattcagcagcacgt
ttcagaggctgaaaacattctaggcctcgataagattgtatggaggctag
aagcttccaggactgagcctaggttagcagacagaggcagtaagcttcgg
agacgacaattacatcagggtaaataaaaggttacttttacacacgctgg
tctcttttaaaggccctcatagatctacttcagtttttctttgggcatca
gggttgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_137453501_137454496
seq2: B6Ng01-306P16.b_49_1041 (reverse)

seq1  CCCCACCCCCACCCCCCCTCACCTGCAATGTGCCTACCCAACAAACAGTC  50
      |||||||||  |||||||||||||||||||||||||||||||||||||||
seq2  CCCCACCCC--CCCCCCCTCACCTGCAATGTGCCTACCCAACAAACAGTC  48

seq1  CGGTGTGGAGGGAGTCTTGAATGCAGAGCTGAGGGTGGGGGACAGTGAT-  99
      |||||||||||||||||||||||||||||||||||| |||||||||||| 
seq2  CGGTGTGGAGGGAGTCTTGAATGCAGAGCTGAGGGT-GGGGACAGTGATC  97

seq1  GGATGTCAAGAGGACCAAGGAAGATTTCACGAGCCAGATAGATTTTTGCA  149
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GGATGTCAAGAGGACCAAGGAAGATTTCACGAGCCAGATAGA-TTTTGCA  146

seq1  GTCTATTGATTTTGGAAGACTATTTGCACAAGTCATTGAAGGGACATTCC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTATTGATTTTGGAAGACTATTTGCACAAGTCATTGAAGGGACATTCC  196

seq1  AGGAGGTCAGCCCACAGCACGGCGCCTGGAAAACTGAATCAGAACACTTG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGTCAGCCCACAGCACGGCGCCTGGAAAACTGAATCAGAACACTTG  246

seq1  TTAATTCCTTCTGTGGCTGTGGGAGCACAGGGCTGTGCCAGGCCCTCCTC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTCCTTCTGTGGCTGTGGGAGCACAGGGCTGTGCCAGGCCCTCCTC  296

seq1  ATCGACTGCAGGGCTCGTTCCACACCTTGGTTCCCCTGGGGAACCTAAGC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGACTGCAGGGCTCGTTCCACACCTTGGTTCCCCTGGGGAACCTAAGC  346

seq1  AGGGCAGCGATTCCCTGCTTCTGTTTCAAAAATAGTGAAAGCATGGACAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCAGCGATTCCCTGCTTCTGTTTCAAAAATAGTGAAAGCATGGACAG  396

seq1  ACCAAGGAGACTTGGGTTAGGAGTAACACCTGATCCCACCCTGCATCTCC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGGAGACTTGGGTTAGGAGTAACACCTGATCCCACCCTGCATCTCC  446

seq1  CTTCTGCTTAAATGTATGCTTTTAATATTTATATGATTACTTGCATCGTG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGCTTAAATGTATGCTTTTAATATTTATATGATTACTTGCATCGTG  496

seq1  AGCCTAATATAATCTTTTATGATTTTATTTTATTTTATTTTATTTTATTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTAATATAATCTTTTATGATTTTATTTTATTTTATTTTATTTTATTT  546

seq1  TATTTTATTTTTCTGAGGCAGGGTTTCTCTGTGTAGCCCTGACTGTCCTG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTATTTTTCTGAGGCAGGGTTTCTCTGTGTAGCCCTGACTGTCCTG  596

seq1  GAGCTCACTTAGTAGACCAGGCTGGCCTCAAACTCAGAAATCTGCCTGCC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTCACTTAGTAGACCAGGCTGGCCTCAAACTCAGAAATCTGCCTGCC  646

seq1  TCTGCCTCCCAAGTGCTGGGATTAAAGGCGTGTGCCACCACTGCCCAGCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTCCCAAGTGCTGGGATTAAAGGCGTGTGCCACCACTGCCCAGCT  696

seq1  ATTATTTTACTTTTTAAGACAGGATAACACTCTTATAGTCCAGACTGCCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTTACTTTTTAAGACAGGATAACACTCTTATAGTCCAGACTGCCA  746

seq1  GACTAGCCTGAAACTCACTATATAGTATAGGCTAGCCTTAAACTCCTGGT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAGCCTGAAACTCACTATATAGTATAGGCTAGCCTTAAACTCCTGGT  796

seq1  GACTCTCCAGCCTCAACTCTTAGGTGCTAGGATTTTAAACATATACTATC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCTCCAGCCTCAACTCTTAGGTGCTAGGATTTTAAACATATACTATC  846

seq1  AAGACTTGCTGAGTTTGATAAAATGTCATGGATACTCTTGCCCTCTGACA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTTGCTGAGTTTGATAAAATGTCATGGATACTCTTGCCCTCTGACA  896

seq1  GATGTCAATCACCATACCAGGCCCAGTATCTTCTGTTTGGACCACTGATC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTCAATCACCATACCAGGCCCAGTATCTTCTGTTTGGACCACTGATC  946

seq1  TGCTGGGGAGACCCTGCTGGAGTTACCTCATGTCTTGACTGGAATTC  996
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGGGAGACCCTGCTGGAGTTACCTCATGTCTTGACTGGAATTC  993

seq1: chr7_137428928_137429927
seq2: B6Ng01-306P16.g_65_1071

seq1  GAATTCCAGGGATTGAAGACAGTAGACCTAACCTGCATACCTTGACCCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGGATTGAAGACAGTAGACCTAACCTGCATACCTTGACCCAC  50

seq1  ATGACCGCTGCAGTAGAACTCCAGGCTAACTGGCTCAGCATCCAGGTGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACCGCTGCAGTAGAACTCCAGGCTAACTGGCTCAGCATCCAGGTGCC  100

seq1  TCCAGAAACTGTATAAAATAAATAAATTAGCACACAGCTTTAATCCCTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAAACTGTATAAAATAAATAAATTAGCACACAGCTTTAATCCCTCT  150

seq1  GGCTAGAATACGGACAAGTCCTTATTACTCACCTGCAATCCCAAACAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAGAATACGGACAAGTCCTTATTACTCACCTGCAATCCCAAACAATG  200

seq1  AAGGTAAAGTTAGTTTGTAGAAGGAAGCAGCCATGTTTGAAAGTGATGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTAAAGTTAGTTTGTAGAAGGAAGCAGCCATGTTTGAAAGTGATGTC  250

seq1  TAATTGAGTGGCAGAAAAAGGGACGAATCAAAGAAAGATTTGACAGAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGAGTGGCAGAAAAAGGGACGAATCAAAGAAAGATTTGACAGAATA  300

seq1  GGGTACGCCCAACTCTCAAGAGAAAAGAGAGGAGGGGGAAACTACTCAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTACGCCCAACTCTCAAGAGAAAAGAGAGGAGGGGGAAACTACTCAAG  350

seq1  GGAGAGACAGACAGTACAGGAGGAAGAGGGTACAGTACAGGAATACAGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGACAGACAGTACAGGAGGAAGAGGGTACAGTACAGGAATACAGTA  400

seq1  GACAAACAGTACAAACAGTACAGGGATACAGTAGACACACAGTACAAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAACAGTACAAACAGTACAGGGATACAGTAGACACACAGTACAAACA  450

seq1  GTACAGGGATACAGTAGAGGTCCTGGAGAACAGGGCAGTAGAGTTGAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAGGGATACAGTAGAGGTCCTGGAGAACAGGGCAGTAGAGTTGAGAG  500

seq1  GGAGAGGAGAGCAGCACAGAGAGAAAGAAGGAGGCAGTGTTACCAGGAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGGAGAGCAGCACAGAGAGAAAGAAGGAGGCAGTGTTACCAGGAGA  550

seq1  GTTTTACAGAGACAGATTGGGGAGAGAGCAAGCTAGACACAGGTAAAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTACAGAGACAGATTGGGGAGAGAGCAAGCTAGACACAGGTAAAGAA  600

seq1  CAATAGAACGAGGAGCCAGAAGATGAGAAGACATTGCTAGAGTTGGTTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAGAACGAGGAGCCAGAAGATGAGAAGACATTGCTAGAGTTGGTTTG  650

seq1  AGATCAAGCAGAGCAATTCAGAAGAAGCCGAGAGAGAAGCCAGGTTGGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCAAGCAGAGCAATTCAGAAGAAGCCGAGAGAGAAGCCAGGTTGGAT  700

seq1  CCGTCCACTGGGAGAGGAGCTGGAGCCAGAACAGCTGAGTTAAACCAGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTCCACTGGGAGAGGAGCTGGAGCCAGAACAGCTGAGTTAAACCAGCC  750

seq1  AGCAAAAGATCAGGAAAAACTAGAAAGGGTGGGTTTATTCAGCAGCACGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAAGATCAGGAAAAACTAGAAAGGGTGGGTTTATTCAGCAGCACGT  800

seq1  TTCAGAGGCTGAAAACATTCTAGGCCTCGATAAGATTGTATGGAGGCTAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAGGCTGAAAACATTCTAGGCCTCGATAAGATTGTATGGAGGCTAG  850

seq1  AAGCTTCCAGGACTGAGCCTAGGTTAGCAGACAGAGGCAGTAAGCTTCGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTCCAGGACTGAGCCTAGGTTAGCAGACAGAGGCAGTAAGCTTCGG  900

seq1  AGACGACAATTACATCA-GGTAAATAAAA-GTTACTTTTACACAACGCT-  947
      ||||||||||||||||| ||||||||||| ||||||||||||| ||||| 
seq2  AGACGACAATTACATCAGGGTAAATAAAAGGTTACTTTTACAC-ACGCTG  949

seq1  GTCTCTTT--AAGGCCCTCATAGATCTAC-TCAG-TTTTCTTT-GGCATC  992
      ||||||||  ||||||||||||||||||| |||| |||||||| ||||||
seq2  GTCTCTTTTAAAGGCCCTCATAGATCTACTTCAGTTTTTCTTTGGGCATC  999

seq1  AGGGTTGG  1000
      ||||||||
seq2  AGGGTTGG  1007