BAC Information

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BAC

Clone NameB6Ng01-307A19
Chromosome7 (Build37)
Map Location 20,729,398 - 20,730,356
singlet/doubletsinglet
Overlap genenone
Upstream geneQpctl, Snrpd2, Gipr, Eml2, Gpr4, Opa3, Vasp, C79127, Rtn2, Fosb, D830036C21Rik, Ercc1, Cd3eap, Ppp1r13l, Ercc2, Klc3, Ckm, Mark4, 4933417E01Rik, Bloc1s3, Trappc6a, Nkpd1, BC024868, Gemin7, Zfp296, Sfrs16, Relb, Clptm1, Apoc2, Apoc4, Apoc1, Apoe, Tomm40, Pvrl2, Bcam, Cblc, Bcl3, Ceacam16, Ceacam19, Pvr, 2210010C17Rik, EG243872, Ceacam20, Nlrp9b, EG667040, EG667067, LOC620401, V1rd21
Downstream geneEG620537, LOC100043519, EG620574, LOC100043523, EG545926, LOC100043528, LOC100042964, LOC100042966, LOC100043533, EG435949, LOC100043536, LOC100042968, LOC100042971, EG667129, EG667135, EG435946, LOC100042976, LOC100043550, LOC667156, LOC673977, LOC667166, LOC100042980, EG381936, LOC100043559, LOC667311, LOC100043561, LOC667302, EG667292, LOC100043566, LOC100043569, EG436135, LOC100042996, EG667273, EG667268, EG667262, EG667259, LOC100043574
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-307A19.bB6Ng01-307A19.g
ACCGA099924GA099925
length9781,199
definitionB6Ng01-307A19.b B6Ng01-307A19.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcggctctgagccccatttttaatggggttatttgattt
tctggagtccaccttcttgagttctttatatgtattggatattagtaccc
tatctgatttaggagttgtaaagatcctttcccagactgttaatggcctt
tttgtcttattgacagtgtcttttgccttacagaatctttgcaattttat
gaggtcccatttgtcaattcttgatcctaccacacaagccatttctgttc
tattcaggaatttctcccctgtgcccatatcttcaaggcttttccccact
ttctcctctatgaatttcagtgtctcttgttttcttttttaggtatttat
ttcatttacatttccaatgctatcccaaatgtcatccacaccccttcccc
acccactcccccacccaccgactcccacttcgttttttaaattttttctt
tttctttaatttttcttttttattttcaattaggtatttatttcatttac
atttccaatgctatcccaatagtcccccaagtgctctcccacccactccc
acttcttggttctggctttcctctatactgaggcatataaagtttgcatg
accaatgggcctctctttccactgatggccgactaggatatcatctgata
cataatgcagatagagacaagagctccggggtactggttagttcatattg
ttgttccacctatagggttgcagatcccttatgctccttgattactttct
ctagctcatccattgggggccatgtgatccatccagtaactgactgtgag
catgcacttctgtgtttgctaggccccggaatagcgtcacaagagacatc
tatatcagtctcctttcagcaaaatcttgctagtgtatgcaatggtgtca
gcgtttggaggctgactatggaatggattcccagatatgtcagtctctaa
ttggacgatccttttgtctcagctccaa
gaattcttcagtgaggaatatcgggctgagaagcacctaaaaaaatgttc
aacatcctttttcatcagagaaataagaatcatactcatggattggcagg
atcaatatagtaaaaatggctacttgccaaaagcaatctacagattcaat
gcaatccccatcaaaattccaactcaattcttcaatgaattaggaagggc
aatctgcaaattcatcttgtaaaacaaaaaacctaggatagcaaaaactc
ttctcaaggataaaagatcctctggtggaaatacaaatcaaaacaatact
aagattacacttcacaccagtcagaatggctaagataaaaatctcaggtg
acagcaaatgcaggcaaggatgtggagaaagtggaacactcctccattgc
tggtgggagtacaagctagtacaacaaatctggaaatcgatctggcagtt
cctcagaaaattggacatagttctgccagaagatccagcaattcttctcc
tgggcatatactcagaaaatgctccaatttttaataaggacacatgttcc
actatgttcatagcagcctcatatataatatccagaagctggaaaaacct
tagtgtccctcaacaaagaatggatacagaaaatgtggtacatttacaaa
atggagttctatgcagctattaaaaacaaggaattcatgaaatttttaga
ggaatggatagagctggaggatatcatcatgattgaggtaacccaatcac
aaaaagacacatgtgatatgcacccactgataagtgaatattagcccaga
agctcagaatacccaagatacaatttgcaaaacacatgaaactcaagaaa
taggaagacaaaatgtggacacatcaatcctttcttagaaaggtgaacaa
aatacccatggaaaggagttacagagacaaagtgtggagcagagactgaa
aggagtgaccatcccagaaactgcctcaccttgaggatccatcccataaa
ccaccaccaaacccagatacttattgcagatgccaacagagcttgctgac
aggagaactggtataacttgtctactgaagaggccctgcccagttacctg
actgatataggaaggtgaatggcctccacagttcaatcaatagaatagag
gcacaaagctctccgattgaaagaaaggccttggagaagaaaagtcata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_20729398_20730356
seq2: B6Ng01-307A19.b_44_1002

seq1  GAATTCTTTGTTCGGCTCTGAGCCCCATTTTTAATGGGGTTATTTGATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTCGGCTCTGAGCCCCATTTTTAATGGGGTTATTTGATTT  50

seq1  TCTGGAGTCCACCTTCTTGAGTTCTTTATATGTATTGGATATTAGTACCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAGTCCACCTTCTTGAGTTCTTTATATGTATTGGATATTAGTACCC  100

seq1  TATCTGATTTAGGAGTTGTAAAGATCCTTTCCCAGACTGTTAATGGCCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGATTTAGGAGTTGTAAAGATCCTTTCCCAGACTGTTAATGGCCTT  150

seq1  TTTGTCTTATTGACAGTGTCTTTTGCCTTACAGAATCTTTGCAATTTTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCTTATTGACAGTGTCTTTTGCCTTACAGAATCTTTGCAATTTTAT  200

seq1  GAGGTCCCATTTGTCAATTCTTGATCCTACCACACAAGCCATTTCTGTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTCCCATTTGTCAATTCTTGATCCTACCACACAAGCCATTTCTGTTC  250

seq1  TATTCAGGAATTTCTCCCCTGTGCCCATATCTTCAAGGCTTTTCCCCACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCAGGAATTTCTCCCCTGTGCCCATATCTTCAAGGCTTTTCCCCACT  300

seq1  TTCTCCTCTATGAATTTCAGTGTCTCTTGTTTTCTTTTTTAGGTATTTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCTCTATGAATTTCAGTGTCTCTTGTTTTCTTTTTTAGGTATTTAT  350

seq1  TTCATTTACATTTCCAATGCTATCCCAAATGTCATCCACACCCCTTCCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTACATTTCCAATGCTATCCCAAATGTCATCCACACCCCTTCCCC  400

seq1  ACCCACTCCCCCACCCACCGACTCCCACTTCGTTTTTTAAATTTTTTCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACTCCCCCACCCACCGACTCCCACTTCGTTTTTTAAATTTTTTCTT  450

seq1  TTTCTTTAATTTTTCTTTTTTATTTTCAATTAGGTATTTATTTCATTTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTAATTTTTCTTTTTTATTTTCAATTAGGTATTTATTTCATTTAC  500

seq1  ATTTCCAATGCTATCCCAATAGTCCCCCAAGTGCTCTCCCACCCACTCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCAATGCTATCCCAATAGTCCCCCAAGTGCTCTCCCACCCACTCCC  550

seq1  ACTTCTTGGTTCTGGCTTTCCTCTATACTGAGGCATATAAAGTTTGCATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTTGGTTCTGGCTTTCCTCTATACTGAGGCATATAAAGTTTGCATG  600

seq1  ACCAATGGGCCTCTCTTTCCACTGATGGCCGACTAGGATATCATCTGATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATGGGCCTCTCTTTCCACTGATGGCCGACTAGGATATCATCTGATA  650

seq1  CATAATGCAGATAGAGACAAGAGCTCCGGGGTACTGGTTAGTTCATATTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATGCAGATAGAGACAAGAGCTCCGGGGTACTGGTTAGTTCATATTG  700

seq1  TTGTTCCACCTATAGGGTTGCAGATCCCTTATGCTCCTTGATTACTTTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCCACCTATAGGGTTGCAGATCCCTTATGCTCCTTGATTACTTTCT  750

seq1  CTAGCTCATCCATTGGGGGCCATGTGATCCATCCAGTAACTGACTGTGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCTCATCCATTGGGGGCCATGTGATCCATCCAGTAACTGACTGTGAG  800

seq1  CATGCACTTCTGTGTTTGCTAGGCCCCGGAATAGCGTCACAAGAGACATC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCACTTCTGTGTTTGCTAGGCCCCGGAATAGCGTCACAAGAGACATC  850

seq1  TATATCAGTCTCCTTTCAGCAAAATCTTGCTAGTGTATGCAATGGTGTCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCAGTCTCCTTTCAGCAAAATCTTGCTAGTGTATGCAATGGTGTCA  900

seq1  GCGTTTGGAGGCTGACTATGGAATGGATTCCCAGATATGTCAGTCTCTAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTTTGGAGGCTGACTATGGAATGGATTCCCAGATATGTCAGTCTCTAA  950

seq1  TTGGACGAT  959
      |||||||||
seq2  TTGGACGAT  959