BAC Information

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BAC

Clone NameB6Ng01-307B23
Chromosome7 (Build37)
Map Location 119,597,114 - 119,598,245
singlet/doubletsinglet
Overlap geneParva
Upstream geneGalntl4, LOC668399, LOC100042678, Usp47, Dkk3, Mical2, Micalcl
Downstream geneLOC627808, Tead1, 4632411J06Rik, LOC434227, Arntl, A630005I04Rik, Btbd10, Pth, LOC100042736
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-307B23.bB6Ng01-307B23.g
ACCGA099976GA099977
length1,1781,128
definitionB6Ng01-307B23.b B6Ng01-307B23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaataatagagaaaaacctgagtactgagattctgatagccatag
taagaatgcacattctacttaattatgaaaaagaatattcatggtagttt
aaaaatgagatttatttatttactccatgtgtgtggatgttttgcctgta
tgcatgtctgtctgtgcacaatgtgtgtacctggtatccacagagaccac
aggaagttatcagatttccctttgctggggttgcagatggttatgagctg
tcacatgggtgctgggaatggaacccaggcctctaaaagagcagctctga
actgccgagtcatttctccagcccttcatgttcattttgttgttatacct
taagggacaggagtggtggtcattgtgtgtgataaatgtgttgttaggct
agaaaagacatcgatggcaggtacacaaaaacaaacctgtagaccaatag
gggagcgtaggacaccaggaaataaacctgtggctacagtcacctggttt
tcaacagggatgcagaaaagcatttcctggagaaaaaaatggcctctaac
aagtggtgccgggaaagccaagcactcaaccccttgcaaaagaatgaaac
tagatctgtatctctcaccgtgagtgacaatcaactcaaacgatcaaaga
tcttaacgtgggacctgaaaagttgaagctgctgatagaaaacccaagca
aaagacgtctacacaggcatagacaaagacttcccacaaagaacccagtg
tcttgggaaatgaccccgtgaactgaaaaatgggactatgggtaattaaa
aaatgtctgcagagcagaggaaacaatcagcgtaaggaaacggcctacag
catgggagaaaatcttgctagctcctgtgccataagatgtagcagctgta
aagaaccttaaagaattaacatcactctaccctctcaaccatccaatgaa
tgactgggtaaatgcactgatagacatttctcaagagataatgcaaatta
tacatgtataatttgcaaatttctcacagaatgcaattttatattattat
actactatatatatatgtgctctactcctaacatcaggcatgcagtaaag
tactgtgagattctattccagttagatgactacgacaggtaacctactat
caattccgggtggaagagcctcatcagc
gaattcctaagatcctgtctccagcatttagtgttcacagacatttctgg
agttcaaggcaaaaggcctttgtgtttctagcattccctcttctcccagg
ccgactgcctctggtttcccagcctttgccgactgggctctctcttgact
tttgggataaatatttagagattgtgtgttcttgtggcatgcttgccttt
gatgcagagggtccagggttctgattggaggaagcctctagccctatgga
gatccaaagctgccagccagtcggagcccctctgcctctccagttcttgc
aggcaggcgccctggaaggtttgcagggctctcctgccctcctgcagtgc
acttggctagagatgagacttaagactgatttccttttagggataattgt
gcagccaaccagcagcagaaaacccagtgacagggataatgacatccagg
gccttgagaaggagcagagagaagggcagagtgactcatgagcccctgca
tcctcccagaacattccaagaactgcctgcctgctgagttcacacccgga
gactattatcctaccaggggcagcaaggccaactgctgagtgttagcccc
agggaggggattgcagatgccctggaaggaacagccctggagttgaattt
ccatcttgggaaggagacacaccacactttcctcttcagcctagcttcta
gggactggtcctctggagggacacagacctcagagctgcttgggcctggc
catatcatttgtttctttgaatgtcagttttccatcttctaaacagggat
caaaaggccttgaagcaatgttggggagcgactgaagaagggtattgttt
gacatgagcacagccttgtcaagaaccccagtgtctcagacccatggaaa
gtggcaaagcgttccctgggtgaggctcagaggatggtagaacccttcct
cttgtcatgtgtggatactcacagtcgctccagaaaaatgcccactgtaa
ctttctccctgctccggcgtgctggatgtctgaagactgctcccctacac
agctgctggtgtgagactagctagcctgctcttgttggcctggttataat
acatgctgatcgatctctgtcagcctaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_119597114_119598245
seq2: B6Ng01-307B23.g_65_1192

seq1  GAATTCCTAAGATCCTGTCTCCAGCATTTAGTGTTCACAGACATTTCTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAAGATCCTGTCTCCAGCATTTAGTGTTCACAGACATTTCTGG  50

seq1  AGTTCAAGGCAAAAGGCCTTTGTGTTTCTAGCATTCCCTCTTCTCCCAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCAAGGCAAAAGGCCTTTGTGTTTCTAGCATTCCCTCTTCTCCCAGG  100

seq1  CCGACTGCCTCTGGTTTCCCAGCCTTTGCCGACTGGGCTCTCTCTTGACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGACTGCCTCTGGTTTCCCAGCCTTTGCCGACTGGGCTCTCTCTTGACT  150

seq1  TTTGGGATAAATATTTAGAGATTGTGTGTTCTTGTGGCATGCTTGCCTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGATAAATATTTAGAGATTGTGTGTTCTTGTGGCATGCTTGCCTTT  200

seq1  GATGCAGAGGGTCCAGGGTTCTGATTGGAGGAAGCCTCTAGCCCTATGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCAGAGGGTCCAGGGTTCTGATTGGAGGAAGCCTCTAGCCCTATGGA  250

seq1  GATCCAAAGCTGCCAGCCAGTCGGAGCCCCTCTGCCTCTCCAGTTCTTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCAAAGCTGCCAGCCAGTCGGAGCCCCTCTGCCTCTCCAGTTCTTGC  300

seq1  AGGCAGGCGCCCTGGAAGGTTTGCAGGGCTCTCCTGCCCTCCTGCAGTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGGCGCCCTGGAAGGTTTGCAGGGCTCTCCTGCCCTCCTGCAGTGC  350

seq1  ACTTGGCTAGAGATGAGACTTAAGACTGATTTCCTTTTAGGGATAATTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGCTAGAGATGAGACTTAAGACTGATTTCCTTTTAGGGATAATTGT  400

seq1  GCAGCCAACCAGCAGCAGAAAACCCAGTGACAGGGATAATGACATCCAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCCAACCAGCAGCAGAAAACCCAGTGACAGGGATAATGACATCCAGG  450

seq1  GCCTTGAGAAGGAGCAGAGAGAAGGGCAGAGTGACTCATGAGCCCCTGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGAGAAGGAGCAGAGAGAAGGGCAGAGTGACTCATGAGCCCCTGCA  500

seq1  TCCTCCCAGAACATTCCAAGAACTGCCTGCCTGCTGAGTTCACACCCGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCCAGAACATTCCAAGAACTGCCTGCCTGCTGAGTTCACACCCGGA  550

seq1  GACTATTATCCTACCAGGGGCAGCAAGGCCAACTGCTGAGTGTTAGCCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTATTATCCTACCAGGGGCAGCAAGGCCAACTGCTGAGTGTTAGCCCC  600

seq1  AGGGAGGGGATTGCAGATGCCCTGGAAGGAACAGCCCTGGAGTTGAATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGGGGATTGCAGATGCCCTGGAAGGAACAGCCCTGGAGTTGAATTT  650

seq1  CCATCTTGGGAAGGAGACACACCACACTTTCCTCTTCAGCCTAGCTTCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTTGGGAAGGAGACACACCACACTTTCCTCTTCAGCCTAGCTTCTA  700

seq1  GGGACTGGTCCTCTGGAGGGACACAGACCTCAGAGCTGCTTGGGCCTGGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACTGGTCCTCTGGAGGGACACAGACCTCAGAGCTGCTTGGGCCTGGC  750

seq1  CATATCATTTGTTTCTTTGAATGTCAGTTTTCCATCTTCTAAACAGGGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATCATTTGTTTCTTTGAATGTCAGTTTTCCATCTTCTAAACAGGGAT  800

seq1  CAAAAGGCCTTGAAGCAATGTTGGGGAGCGACTGAAGAAGGGTATTGTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGGCCTTGAAGCAATGTTGGGGAGCGACTGAAGAAGGGTATTGTTT  850

seq1  GACATGAGCACAGCCTTGTCAAGAACCCCAGTGTCTCAGACCCATGG-AA  899
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GACATGAGCACAGCCTTGTCAAGAACCCCAGTGTCTCAGACCCATGGAAA  900

seq1  GTGGCAAAGCGTTCCCTGGGTGAGGCTCAGAGGATGGTAGAA-CCTTCCT  948
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GTGGCAAAGCGTTCCCTGGGTGAGGCTCAGAGGATGGTAGAACCCTTCCT  950

seq1  CTTGTCCATGTGTGGATACTCACAGTCGCTCCAG-AAAATGCCCACTGTA  997
      ||||| |||||||||||||||||||||||||||| |||||||||||||||
seq2  CTTGT-CATGTGTGGATACTCACAGTCGCTCCAGAAAAATGCCCACTGTA  999

seq1  ACTTTCTCCCTGCTCC-GCGTGCT-GATGTCCTGAAGACTGCTCCCCTAC  1045
      |||||||||||||||| ||||||| ||||| |||||||||||||||||||
seq2  ACTTTCTCCCTGCTCCGGCGTGCTGGATGT-CTGAAGACTGCTCCCCTAC  1048

seq1  ACAGGCTGCTTGTGTGGAGACTAGCTAAGCCTGCCTCCTTGTTTGCCTGT  1095
      ||| |||||| |||| |||||||||| |||||||   |||||| ||||| 
seq2  ACA-GCTGCTGGTGT-GAGACTAGCT-AGCCTGC--TCTTGTTGGCCTGG  1093

seq1  GTATAATAAACATGCTGATCG-TCTCTGTCAGGCCTAA  1132
       ||||||  |||||||||||| ||||||||| ||||||
seq2  TTATAAT--ACATGCTGATCGATCTCTGTCA-GCCTAA  1128