BAC Information

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BAC

Clone NameB6Ng01-307C12
Chromosome7 (Build37)10 (Build37)
Map Location 133,471,854 - 133,473,01698,087,111 - 98,087,160
singlet/doubletsingletsinglet
Overlap genenone
Upstream gene4933440M02Rik, LOC100043014, Jmjd5, Nsmce1, EG244214, Il4ra, Il21r, Gtf3c1, D430042O09Rik, Gsg1l, Xpo6, Sbk1, LOC100043495
Downstream geneLat, 2210013K02Rik, Nfatc2ip, Cd19, Rabep2, Atp2a1, Sh2b1, Tufm, Atxn2l, Eif3s8, Cln3, Apob48r, Il27, Nupr1, Ccdc101, Sult1a1, LOC629029, Giyd2, Bola2, Coro1a, Snrp1c-ps1, LOC100043044, Mapk3, Gdpd3, Ypel3, Tbx6, Ppp4c, Aldoa, 1500016O10Rik, 4930451I11Rik, Doc2a, Ccdc95, Hirip3, 1110032O16Rik, Kctd13, A830007L07Rik, Sez6l2, D830044I16Rik, Cdipt, Mvp, 2900092E17Rik, Maz, Kif22, 1810010M01Rik, AI467606, Qprt, Spn, Cd2bp2, Tbc1d10b, Mylpf, Sept1, LOC100043580, Zfp553, Zfp771, 2410015N17Rik, Sephs2, Itgal
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-307C12.bB6Ng01-307C12.g
ACCGA100000GA100001
length941328
definitionB6Ng01-307C12.b B6Ng01-307C12.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(133,471,854 - 133,473,016)(98,087,111 - 98,087,160)
sequence
gaattcctgaggttagatactgtgatggtttaaaaatgcttgacccagaa
agtggcactactagaaggtgtggtcttgctggagtaggtatgacactgtg
ggtgtgggcttaagactctcaccttagcttcttagaagtcagtcttctac
tagcagccttcagatgaagatgtagaactctcagctcctcctacactgta
cctgcttagatgctgccaatctcccatcctgatgataatggactgaacct
ctgaacctgtaagccagtcccaaatgtacgttgtactttataagacaacg
tacttggtcatgatgtctgttcacagcagtaaaaccctaactaagacaga
taccaagtcacaaaaaccctacccacttagtgctgtgggaatgaccgcca
tgactacagtaaagactcttgcatgaaagacacagtaaattatcagcgaa
tccatctccccaactctgcacagaactatctggtgcaataggaatctttt
aactcttttttttttttttttttttttttttttttttttttttttttttt
tggggttttccagacagggtttctctgtatagccctagctgtcctggaac
tcactttgtagaccaggctgggctcgaactcagaaatccacctggctctg
ccttccaagtgctgggaataaaagcgtgcgccaccacgcccgggggaatc
ttttaactcttaattctacaacagtctcatggaatatcttttggcaatct
catattaatgctattaaaaactaaaggaaatcaagttctttacaattaat
gaaaacgggaggaaaatttttattcacacacaccaagaaacccaaccttc
gagaaaagattggcatgcttaacattgatggccctcttgggcatggcttt
ggaacttcataataaacattaattcaaaaataaagtttcag
atttacaacaaaagctttatttagcctcctgtatgcgtttccttttcctt
ttccttttccttttccttttccttttccttttccttttccttttcttttt
cccttttcttttcttttcttttttgtatagcatacagtttatccagggca
tagggaggggagttgagggagtagagacagagaaaggcagagagagagag
aggaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaa
gaagaagaagaagaagaagaagaagaaagtacaggggaaagccaggccca
agaagtgggagtgggtgggtaggggagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_133471854_133473016
seq2: B6Ng01-307C12.b_45_985 (reverse)

seq1  CTGAAACTTTCTTTTTTTTAAATTAATTTACTTTTATTGTGTATAATAGA  50
                                                        
seq2  --------------------------------------------------  0

seq1  GGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCACATTACATCTATGGAG  100
                                                        
seq2  --------------------------------------------------  0

seq1  GTCAAAGGGCACCTTTATGGAGTTGGTTCTCTTCTTCCTCCTTCACATGA  150
                                                        
seq2  --------------------------------------------------  0

seq1  ATTCCAAGGTCCAAACTCAGGTCACCAGGCTTCAGTGTCCCCGCCCTTTA  200
                                                        
seq2  --------------------------------------------------  0

seq1  GTCCCTCAGCCATCTTCTCAGTTTCTGAAAACTTTA-TTTTGATTTATGT  249
                              ||| |||||||| |||||| |||   
seq2  ------------------------CTG-AAACTTTATTTTTGAATTAATG  25

seq1  TTTATTATTGAAGTTTCAAAAGCATGGCC-AGAGGG-CATCATTGTTAAA  297
      ||||||| ||||||| ||||  |||| || |||||| ||||| |||| ||
seq2  TTTATTA-TGAAGTTCCAAAGCCATGCCCAAGAGGGCCATCAATGTT-AA  73

seq1  GCATG-CAATCTTTTCTCTGAGGTTTGGTTTCTTTGTGTGTGTGTATATA  346
      ||||| ||||||||||||  ||||| |||||||| ||||||||| ||| |
seq2  GCATGCCAATCTTTTCTCGAAGGTTGGGTTTCTTGGTGTGTGTGAATAAA  123

seq1  AATTTTCCT-CCGTTTTCATTTATTGTTAAGGACTTGAATTCCTTTAGTT  395
      ||||||||| ||||||||||| ||||| ||| |||||| |||||||||||
seq2  AATTTTCCTCCCGTTTTCATTAATTGTAAAGAACTTGATTTCCTTTAGTT  173

seq1  TTTAATAGCATTAATATTAGATTGCCAAAAGATATTCCATGAGACTGTTG  445
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TTTAATAGCATTAATATGAGATTGCCAAAAGATATTCCATGAGACTGTTG  223

seq1  TAGAATTAAGAGTTAAAAGATTCCGCCGGGCGTGGTGGCGCACGCCTTTA  495
      |||||||||||||||||||||||| |||||||||||||||||||| ||||
seq2  TAGAATTAAGAGTTAAAAGATTCCCCCGGGCGTGGTGGCGCACGCTTTTA  273

seq1  ATCCCAGCACTTGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCA  545
       ||||||||||||| |||||||| |||||||||||||||||||||| |||
seq2  TTCCCAGCACTTGGAAGGCAGAGCCAGGTGGATTTCTGAGTTCGAGCCCA  323

seq1  GCCTGGTCTACAAAGTGAGTTCCAGGACAGCTAGGGCTATACAGAGAAAC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGTCTACAAAGTGAGTTCCAGGACAGCTAGGGCTATACAGAGAAAC  373

seq1  CCTGTCTCGAAAAACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA  645
      ||||||| ||||| || |||||||||||||||||||||||||||||||||
seq2  CCTGTCTGGAAAACCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA  423

seq1  AAAAAAAAAAAAAGAGTTAAAAGATTCCTATTGCACCAGATAGTTCTGTG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAGAGTTAAAAGATTCCTATTGCACCAGATAGTTCTGTG  473

seq1  CAGAGTTGGGGAGATGGATTCGCTGATAATTTACTGTGTCTTTCATGCAA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTTGGGGAGATGGATTCGCTGATAATTTACTGTGTCTTTCATGCAA  523

seq1  GAGTCTTTACTGTAGTCATGGCGGTCATTCCCACAGCACTAAGTGGGTAG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTTTACTGTAGTCATGGCGGTCATTCCCACAGCACTAAGTGGGTAG  573

seq1  GGTTTTTGTGACTTGGTATCTGTCTTAGTTAGGGTTTTACTGCTGTGAAC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTTGTGACTTGGTATCTGTCTTAGTTAGGGTTTTACTGCTGTGAAC  623

seq1  AGACATCATGACCAAGTACGTTGTCTTATAAAGTACAACGTACATTTGGG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATCATGACCAAGTACGTTGTCTTATAAAGTACAACGTACATTTGGG  673

seq1  ACTGGCTTACAGGTTCAGAGGTTCAGTCCATTATCATCAGGATGGGAGAT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGCTTACAGGTTCAGAGGTTCAGTCCATTATCATCAGGATGGGAGAT  723

seq1  TGGCAGCATCTAAGCAGGTACAGTGTAGGAGGAGCTGAGAGTTCTACATC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGCATCTAAGCAGGTACAGTGTAGGAGGAGCTGAGAGTTCTACATC  773

seq1  TTCATCTGAAGGCTGCTAGTAGAAGACTGACTTCTAAGAAGCTAAGGTGA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCTGAAGGCTGCTAGTAGAAGACTGACTTCTAAGAAGCTAAGGTGA  823

seq1  GAGTCTTAAGCCCACACCCACAGTGTCATACCTACTCCAGCAAGACCACA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTTAAGCCCACACCCACAGTGTCATACCTACTCCAGCAAGACCACA  873

seq1  CCTTCTAGTAGTGCCACTTTCTGGGTCAAGCATTTTTAAACCATCACAGT  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTAGTAGTGCCACTTTCTGGGTCAAGCATTTTTAAACCATCACAGT  923

seq1  ATCTAACCTCAGGAATTC  1163
      ||||||||||||||||||
seq2  ATCTAACCTCAGGAATTC  941

seq1: chr10_98087111_98087160
seq2: B6Ng01-307C12.g_348_397 (reverse)

seq1  CTCCCCTACCCACCCACTCCCACTTTTTGGCCCTGGCGTTCCCCTGTACT  50
      ||||||||||||||||||||||||| |||| |||||| ||||||||||||
seq2  CTCCCCTACCCACCCACTCCCACTTCTTGGGCCTGGCTTTCCCCTGTACT  50