BAC Information

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BAC

Clone NameB6Ng01-308L08
Chromosome7 (Build37)
Map Location 34,310,821 - 34,311,960
singlet/doubletsinglet
Overlap genenone
Upstream geneEG384591, LOC668398, EG384596, LOC100043370, LOC434161, EG270499, LOC100043845, LOC100043373, LOC668410, EG624439, LOC100043376, LOC100043379, LOC100043383, EG668411, LOC100043850, LOC100043386, LOC668416, EG668526, LOC100043388, LOC270234, EG668419, EG668422, EG546954, LOC100043856, LOC100043857, EG545947, EG434676, EG668431, Abpd, EG545948, LOC435963, LOC435962, EG626970
Downstream geneLOC100043859, LOC627004, LOC100043398, LOC100043401, Scgb2b1, LOC668440, Abpz, LOC100043860, LOC627079, LOC635803, Abpg, LOC100043864, LOC100043865, Abpb, Abpa, LOC100043866, LOC100043867, LOC100043868, Wtip, Sae2, LOC100043410, Pdcd2l, Gpi1, 4931406P16Rik, EG619734, Lsm14a, LOC668460, LOC668464
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-308L08.bB6Ng01-308L08.g
ACCGA101139GA101140
length1,1971,139
definitionB6Ng01-308L08.b B6Ng01-308L08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctatcagaccttcaaagcagacctaattccaacgctcctcaaact
atttcacaaaatagaaagagaaggtactctacccaattcattctataaag
ccacaattactttgataactaaaccacacaaaaaaccaacaagggaagag
aacttcataccaatttcccttatgaatatcaatgcaaaaatactcaataa
aatcaccacaaacaagaacacatcaaaatgatcatctatcatgaccaagt
aggcttcatctcagggatgcaaggatggtttaatatatggaaatccatca
acataatccactatataaagacactcaaagaaaaaaaccacatgatcacc
tctttggatgctgagaaagcatttgacaaaattcaacaccccttcatgat
aaaatcatggaaatatcaggaattcaaggcccatacctaaacataataaa
agcaatatacagcaaaggagtagccaacatcaaattaaatggagagatac
tcgaagtaatcccactaaaatcagggactagacaaggctgcctgctttct
ctttaccttttaaacatagtacttgaagtcctagccagagcaattcgaaa
agaaaaagagatcaaggggacacaaattagaaaggaagaagtcaaaatat
cactctttgcagatgatatgatagtatatataagtgaccccaaaaattcc
accagagaactcctaaacctgataaacagcttcagggaagttagctggat
ataaaattaactcaaatcaatggtctttctctacacaaaggataaacaga
ctgagaaggaaattagggaaacaacacccttctcaacagtcacaaataat
ataaaataccttggtgtgactctaactaaaggaagtgaaagatctctatg
ataagaacttcaagtctcttaagaagaatttgaagaagatctcagaagat
gggaaagatcctatgctcatggatttacaggattaatacagtcatatggg
tatcctttgaaagatatctacagatcatgcaatcccatcaaatccactca
atctcactgattgaaagggcaaatgaaatcatctgcataattaaaactaa
gatagcaaacctatttccacaattaaaattacttggtgaatcacatgcct
gcacttagcctgtactacagagccaatgtgtgaattaaaaggtgcat
gaattctgtggtagcaaagatcaactggacacactggcacaggtggactg
atgttgggccttcaggagcttgggaatccagctaagattggactataatt
tttccagggtagttgtggaatattcaaaatcgccatcctgcaggcttttt
tatcagtagtcagaatagctagagcagcaatgtagagtctggcagtgaac
aattaggaggccaggtagctcagaactgaaatatccttgcttagttatga
gaaatcgagcacaaggcacttgaagtgagaacttaatgaacacacaaatg
atgtttattaacagggtcttcctgtgtaattttgggtagcctagaactct
ttgtgtagaccagactgacctctaactcacaaagataggaaggctcatcc
tccaaaataatgagatcaaaggtgagaattaccatacctgttcattgcta
actgattttgacaatgatttccaccagccacaaagaaagttgaatctacc
acacatacacataaacagatagacagacagacagactcacagaccgacag
acaggagacagatagttaggcaggcaggcaggaccacacactcatttctc
aggaaggttatgaggtcaagactaacctgggcaagatctttaaaaacaac
aacaacaacaacaaaacaacaacaaaaaaacaacatataaaaaatagaaa
atctcaacaatgggtttaagaaatcaagtttaggcagaagtgaaagtact
tgccttttattccactattcacatgggagagagttacaaagtcttctgtg
agtccaaggttaacctgatctacatattccaggacagcctggtcctagaa
aggtaggccccctgctccacacaccttggaagcagtctgcttaagcccat
tcactcagataggagatacactgggccccctgacattgccattttagccc
ttcatgaaagggttcttttgacagttcttttgtccttctttaggaagtgt
gggcttttgtagagagacactatctcagaaaaaaaacctaccacacacat
aaggtcaattaagatgctcacacagataagcatggtggaagagactgttc
agagaaagcacgaagctatggcaggatcggccagatagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_34310821_34311960
seq2: B6Ng01-308L08.g_67_1205

seq1  GAATTCTGTGGTAGCAAAGATCAACTGGACACACTGGCACAGGTGGACTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTGGTAGCAAAGATCAACTGGACACACTGGCACAGGTGGACTG  50

seq1  ATGTTGGGCCTTCAGGAGCTTGGGAATCCAGCTAAGATTGGACTATAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGGGCCTTCAGGAGCTTGGGAATCCAGCTAAGATTGGACTATAATT  100

seq1  TTTCCAGGGTAGTTGTGGAATATTCAAAATCGCCATCCTGCAGGCTTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAGGGTAGTTGTGGAATATTCAAAATCGCCATCCTGCAGGCTTTTT  150

seq1  TATCAGTAGTCAGAATAGCTAGAGCAGCAATGTAGAGTCTGGCAGTGAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGTAGTCAGAATAGCTAGAGCAGCAATGTAGAGTCTGGCAGTGAAC  200

seq1  AATTAGGAGGCCAGGTAGCTCAGAACTGAAATATCCTTGCTTAGTTATGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGGAGGCCAGGTAGCTCAGAACTGAAATATCCTTGCTTAGTTATGA  250

seq1  GAAATCGAGCACAAGGCACTTGAAGTGAGAACTTAATGAACACACAAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCGAGCACAAGGCACTTGAAGTGAGAACTTAATGAACACACAAATG  300

seq1  ATGTTTATTAACAGGGTCTTCCTGTGTAATTTTGGGTAGCCTAGAACTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTATTAACAGGGTCTTCCTGTGTAATTTTGGGTAGCCTAGAACTCT  350

seq1  TTGTGTAGACCAGACTGACCTCTAACTCACAAAGATAGGAAGGCTCATCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTAGACCAGACTGACCTCTAACTCACAAAGATAGGAAGGCTCATCC  400

seq1  TCCAAAATAATGAGATCAAAGGTGAGAATTACCATACCTGTTCATTGCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAAATAATGAGATCAAAGGTGAGAATTACCATACCTGTTCATTGCTA  450

seq1  ACTGATTTTGACAATGATTTCCACCAGCCACAAAGAAAGTTGAATCTACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATTTTGACAATGATTTCCACCAGCCACAAAGAAAGTTGAATCTACC  500

seq1  ACACATACACATAAACAGATAGACAGACAGACAGACTCACAGACCGACAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATACACATAAACAGATAGACAGACAGACAGACTCACAGACCGACAG  550

seq1  ACAGGAGACAGATAGTTAGGCAGGCAGGCAGGACCACACACTCATTTCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAGACAGATAGTTAGGCAGGCAGGCAGGACCACACACTCATTTCTC  600

seq1  AGGAAGGTTATGAGGTCAAGACTAACCTGGGCAAGATCTTTAAAAACAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGTTATGAGGTCAAGACTAACCTGGGCAAGATCTTTAAAAACAAC  650

seq1  AACAACAACAACAAAACAACAACAAAAAAACAACATATAAAAAATAGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACAACAACAAAACAACAACAAAAAAACAACATATAAAAAATAGAAA  700

seq1  ATCTCAACAATGGGTTTAAGAAATCAAGTTTAGGCAGAAGTGAAAGTACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCAACAATGGGTTTAAGAAATCAAGTTTAGGCAGAAGTGAAAGTACT  750

seq1  TGCCTTTTATTCCACTATTCACATGGGAGAGAGTTACAAAGTCTTCTGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTTTATTCCACTATTCACATGGGAGAGAGTTACAAAGTCTTCTGTG  800

seq1  AGTCCAAGGTTAACCTGATCTACATATTCCAGGACAGCCTGGTCCTAG-A  849
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  AGTCCAAGGTTAACCTGATCTACATATTCCAGGACAGCCTGGTCCTAGAA  850

seq1  AGGTAGGCCCCCTGCTCCACACACCTTGGAAGCAGTCTGCTTAAGCCCAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAGGCCCCCTGCTCCACACACCTTGGAAGCAGTCTGCTTAAGCCCAT  900

seq1  TCACTCAGATAGGAGATACACT-GGCCCCCTGACATTGCCATTTTAG-CC  947
      |||||||||||||||||||||| |||||||||||||||||||||||| ||
seq2  TCACTCAGATAGGAGATACACTGGGCCCCCTGACATTGCCATTTTAGCCC  950

seq1  TTCATGAAAGGGTTCTTTTGACAGTTCTTTTGTCCTTCTTTAGGAAGTGT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGAAAGGGTTCTTTTGACAGTTCTTTTGTCCTTCTTTAGGAAGTGT  1000

seq1  GGGC-TTTGTAGAGAGACACTATCTCAG-AAAAAAACCTACAACCAACAA  1045
      |||| ||||||||||||||||||||||| |||||||||||| ||  || |
seq2  GGGCTTTTGTAGAGAGACACTATCTCAGAAAAAAAACCTACCAC--AC-A  1047

seq1  CATAAAGGTCAAATTTAAGAATGCCTCCAACAACAGGATAAGCATGGGTT  1095
      ||| ||||||||  ||||| ||| |||  |||    ||||||||| ||| 
seq2  CAT-AAGGTCAA--TTAAG-ATG-CTCACACA----GATAAGCAT-GGTG  1087

seq1  GAAGAGACTGGTTCAAGAGAAAGCACGAAGCATATGG-AAGATAGG----  1140
      ||||||||| |||| |||||||||||||||| ||||| | ||| ||    
seq2  GAAGAGACT-GTTC-AGAGAAAGCACGAAGC-TATGGCAGGATCGGCCAG  1134

seq1  -----  1140
           
seq2  ATAGG  1139