BAC Information

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BAC

Clone NameB6Ng01-309L13
Chromosome7 (Build37)
Map Location 5,757,654 - 5,758,194
singlet/doubletsinglet
Overlap genenone
Upstream geneUbe2s, D430041B17Rik, Isoc2b, Isoc2a, LOC384524, Zfp628, Nat14, A430110N23Rik, LOC665049, Gm1079, Gm1078, Zfp579, Fiz1, Zfp524, 6430526N21Rik, 4632433K11Rik, Zfp784, Zfp580, Ccdc106, U2af2, Epn1, Rfpl4, Rasl2-9, EG665126, V1rd5, V1rd3, EG665150, Nlrp2, EG272350, V1rd4, EG665163, V1rd10, EG630071, EG665255, EG636697, EG636705, LOC636731, LOC673215, V1rd2, LOC100041627, LOC100041637, V1rd1
Downstream geneLOC100041647, V1rd11, LOC100041666, V1rd6, EG384525, EG269859, Nlrp4c, Zfp787, Zfp444, Galp, Zfp371, EG627821, Zfp667, Zfp583, LOC100042467, LOC100042459, Zfp78, Zfp28, LOC100042450, Olfr1344, GA_x5J8B7W3DQU-679632-679375, Olfr1336, Olfr1346, Olfr5, Olfr1347, Olfr1348, Olfr1349, LOC665328, Olfr1350, Zim2, Zim1, Peg3, Usp29, LOC627961
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-309L13.bB6Ng01-309L13.g
ACCGA101892GA101893
length1,182535
definitionB6Ng01-309L13.b B6Ng01-309L13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcatctgaggaataccgaatggttgagatacaactgaaaaaatg
ttcagcatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaagttcaggtgacagc
agatggtggcgaggatgtggagaaagaggaacatttctgcactcttggtg
ggattgcatgattgtacaaccactctggaaatcagtctggcggtttctca
gaaaattgaacatggtactactggaggattctgcaatacctttcctgggc
atatatccagaagatgttccaactagtaagaaagaaatatgctccactat
gttcatagtagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacaaataatgtggtatatttacacaatg
gagtactactcagcttttaaaaggaatgaatttatgaaattcctaggcaa
atggttggagctggagggcatcatactgagtgaggtaacacaatcacaaa
agaactcaaatgatatgtactcactgataagtggatattagcccagaaac
ttagaatacccaagatataagttacaatttgcaaaacacatgaaactcaa
gaagaacggagaccaaagtgtggacactttgccctttcttacaattggga
acaaaacactcatggaaggagttgcagagacaaagtttggagctgagaca
aaaggatgggccatctagagacttccatatccagggatccatcccataat
cagcctccaaatgctgacacctttgcatacactaggaagactttgctgat
aggaccctgatataggtgtctctagtgagactacgctgggtcctagcaaa
cacataagtggatgctcacagttagctattggatggatcacaggccccca
atggaggagctagagaaaagagctaaagggatctgcaaccgtattgtgga
acacattatgactaccagttccccgagatcttgactctagctgcatatgt
atcaaaagatgactagctgccatcactgtaaagaaagccattgactttca
accttattggcctagttaagggaacgcaggctaaattgcgattgggttgg
gtaaggacttgcgttcgcagtcgttgcgacgt
tccatggaagtttattattatattagactgtaccagattttagagaaatt
tacttggaaaaaaacaaattccgtaattacactcaagaaaatggattgag
gaatcagttaataatataggcaatcacccattttcatggctgccatattc
actatagccatgatatagaaacagtttaaatatacatcagataatgaatg
gaaaatgatcatgaagtacatttacaccatgggatactatttatctgcta
agcaaaataatattaagaactttgtagataaatggatcattgagaagcaa
actttctttatatggtaacccacaaattaagacaaatattgcttattttc
cttagtttgtagacattaactttgaatcttgagttatatgtctttaattt
ggaatacttctataaaagtaaaaaacataggattaagggtcttgtgatag
aacaaagtcatttaaggactaaaggaactaatggaaagtgattaattaaa
ttatgttgaggggatgaggagagaatatggggaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_5757654_5758194
seq2: B6Ng01-309L13.g_68_608

seq1  GAATTCTCCATGGAAGTTTATTATTATATTAGACTGTACCAGATTTTAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCATGGAAGTTTATTATTATATTAGACTGTACCAGATTTTAGA  50

seq1  GAAATTTACTTGGAAAAAAACAAATTCCGTAATTACACTCAAGAAAATGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTTACTTGGAAAAAAACAAATTCCGTAATTACACTCAAGAAAATGG  100

seq1  ATTGAGGAATCAGTTAATAATATAGGCAATCACCCATTTTCATGGCTGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGGAATCAGTTAATAATATAGGCAATCACCCATTTTCATGGCTGCC  150

seq1  ATATTCACTATAGCCATGATATAGAAACAGTTTAAATATACATCAGATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCACTATAGCCATGATATAGAAACAGTTTAAATATACATCAGATAA  200

seq1  TGAATGGAAAATGATCATGAAGTACATTTACACCATGGGATACTATTTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGGAAAATGATCATGAAGTACATTTACACCATGGGATACTATTTAT  250

seq1  CTGCTAAGCAAAATAATATTAAGAACTTTGTAGATAAATGGATCATTGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTAAGCAAAATAATATTAAGAACTTTGTAGATAAATGGATCATTGAG  300

seq1  AAGCAAACTTTCTTTATATGGTAACCCACAAATTAAGACAAATATTGCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAACTTTCTTTATATGGTAACCCACAAATTAAGACAAATATTGCTT  350

seq1  ATTTTCCTTAGTTTGTAGACATTAACTTTGAATCTTGAGTTATATGTCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCCTTAGTTTGTAGACATTAACTTTGAATCTTGAGTTATATGTCTT  400

seq1  TAATTTGGAATACTTCTATAAAAGTAAAAAACATAGGATTAAGGGTCTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTGGAATACTTCTATAAAAGTAAAAAACATAGGATTAAGGGTCTTG  450

seq1  TGATAGAACAAAGTCATTTAAGGACTAAAGGAACTAATGGAAAGTGATTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGAACAAAGTCATTTAAGGACTAAAGGAACTAATGGAAAGTGATTA  500

seq1  ATTAAATTATGTTGAGGGGATGAGGAGAGAATATGGGGAGA  541
      |||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAATTATGTTGAGGGGATGAGGAGAGAATATGGGGAGA  541