BAC Information

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BAC

Clone NameB6Ng01-310B22
Chromosome7 (Build37)
Map Location 110,049,186 - 110,050,352
singlet/doubletsinglet
Overlap geneOlfr570
Upstream geneF930017I19Rik, 2400001E08Rik, Lrrc51, LOC667222, Numa1, Il18bp, Rnf121, Trpc2, Art5, Art1, Chrna10, Nup98, Frag1, Rhog, Stim1, Rrm1, Olfr543, Olfr544, Olfr545, LOC667284, Olfr547, Olfr548-ps1, Olfr549, Trim21, LOC384699, Olfr550, Olfr551, Olfr552, Olfr553, Olfr554, LOC100040840, Olfr555, Olfr556, Trim68, Olfr557, Olfr558, Olfr33, Olfr559, Olfr78, Olfr560, Olfr561, Olfr562-ps1, Olfr563-ps1, Olfr564, Olfr565-ps1, Olfr566, GA_x5J8B7W5P47-379997-380552, Olfr567-ps1, Olfr568, Olfr569
Downstream geneOlfr571, Olfr572, Olfr573-ps1, Olfr574, Olfr575, Olfr576, Olfr577, Olfr578, Olfr1527-ps1, Olfr579-ps1, Olfr580-ps1, Olfr581-ps1, Olfr582, Olfr583, Olfr584, Olfr585, Olfr586, Olfr587-ps1, Olfr588-ps1, Olfr589, Olfr590-ps1, Olfr591, Olfr592, Olfr593, Olfr594, Olfr595-ps1, Usp17, Dub2a, LOC100041187, Olfr597, GA_x5J8B7TU1BB-380-666, Olfr598, Olfr599, Olfr600, Olfr601, Olfr602-ps1, Olfr604, Olfr596-ps1, Dub2, Olfr605, Olfr606, EG546989, Olfr608, Olfr609, Olfr610, Olfr611, EG545985, Olfr614, Olfr615, Olfr616, LOC100042167, Olfr617, Olfr618, Olfr619, Olfr620, LOC667639, Olfr622, Olfr623, Olfr624, Olfr625-ps1, Olfr261-ps1, Olfr260-ps1, Olfr627, Olfr1526-ps1, Olfr629, Olfr630, Olfr69, Olfr68, Olfr67, Hbb-b1, EG436003, Hbb-bh1, Hbb-y, Olfr66, Olfr64
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-310B22.bB6Ng01-310B22.g
ACCGA102186GA102187
length1,1791,172
definitionB6Ng01-310B22.b B6Ng01-310B22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttcatccatggattcacagacatggaatcttcagtgctcctcat
tatgtcctttgatcgctttgtagccattcggcaccccctaagatacagtg
ccatcctcacaagctccagggttgtgcaaattgggctagccttttctgtt
aaaagcattctcctggtgcttccccttccattcactttaaagagactcag
atactgcaataaacgcctcttgtcacactcctattgtctccaccaggatg
tcatgaagctggcgtgctctgacaacagggttaacttttactatgggctg
ttcgttgcactctgcatgatgtcagacagtgtgttcattgctgtgtctta
cgtgttcatcttgaagacagtgttgggtattgcatcccatggggagaggc
tcaaagctcttaatacttgtgtatcccatatctgtgctgtgctcattttc
tatgtccctatcattaccttagctaccatgcatcgctttgcaaaacataa
atctccattagctatgattctgatagcagatgctttcttgctggtaccac
ctttgatgaatcccattgtgtattgtgttaaaactaggcagataagagta
aaagttttagaaaaactgggtctgcattctaagtaattggaacaatgtta
ttagaagttgcattttctgtacaataggctactttagagagacagcagtg
tttcatcctcaaaggagattattccatttacctcatagacctatagtttg
ttacaatcaatctgtactattgcttttctgttttgaagaaggaagaagct
tcatattttacagaacctctatgaaatcgttaattgttatttgggatggg
ttgaagacatctatccctaggtacaaaattgaacaataagaatttgcaca
atcttctaaagaaaatctaggagatgtggttttccattgtgtctgggaga
agcccaaaagacaccagaactgtttaacatctctgtatttgtctctattt
tgatattctatatgttgcattaaacccttacacatgtctggagtttgtct
ggagtctgttctttggctgttcactggtgcaatacagggtgtccaccctg
agcattgctggaggacatgaacattgccagatccagcactgctgtaaggc
ttgtgtgggagtcagtactcctattactg
gaattctcacctgaggaataccgaatggtagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagaaaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcatggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccagaggatccagcaatacctctcctgggc
atatatccagaagatatcccaacaggtaagaaggacacatgctccactat
gttcatagcagccttaggtataatagccagaaggtggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagatattaaaaagaatgaatttatgaaattcctaggcaa
atggacggacctggaaggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggataccaaagatatatgatacaatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagaatcgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgtgacaa
aaggatagactatctagagactgtcatatccagggatccaccccataatc
tgcttcctaacgctgacaccaatgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctattggatgggatcacagggctccc
aatgggaggagctagagaaagtacccaaggagctaaaggggatctgcacc
ctatagtggaacagcaatatgaactaaccagtaccccggagctcttgact
ctagctgcatatgtatcaaaagatgcccttgttggccatcactggaagag
agccattgaacagccactgtaattggccccagttacaggcaaacgccagg
cccaaaaaattgggaaatgggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_110049186_110050352
seq2: B6Ng01-310B22.b_44_1222

seq1  GAATTCTTCATCCATGGATTCACAGACATGGAATCTTCAGTGCTCCTCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCATCCATGGATTCACAGACATGGAATCTTCAGTGCTCCTCAT  50

seq1  TATGTCCTTTGATCGCTTTGTAGCCATTCGGCACCCCCTAAGATACAGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCCTTTGATCGCTTTGTAGCCATTCGGCACCCCCTAAGATACAGTG  100

seq1  CCATCCTCACAAGCTCCAGGGTTGTGCAAATTGGGCTAGCCTTTTCTGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCCTCACAAGCTCCAGGGTTGTGCAAATTGGGCTAGCCTTTTCTGTT  150

seq1  AAAAGCATTCTCCTGGTGCTTCCCCTTCCATTCACTTTAAAGAGACTCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCATTCTCCTGGTGCTTCCCCTTCCATTCACTTTAAAGAGACTCAG  200

seq1  ATACTGCAATAAACGCCTCTTGTCACACTCCTATTGTCTCCACCAGGATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTGCAATAAACGCCTCTTGTCACACTCCTATTGTCTCCACCAGGATG  250

seq1  TCATGAAGCTGGCGTGCTCTGACAACAGGGTTAACTTTTACTATGGGCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGAAGCTGGCGTGCTCTGACAACAGGGTTAACTTTTACTATGGGCTG  300

seq1  TTCGTTGCACTCTGCATGATGTCAGACAGTGTGTTCATTGCTGTGTCTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGTTGCACTCTGCATGATGTCAGACAGTGTGTTCATTGCTGTGTCTTA  350

seq1  CGTGTTCATCTTGAAGACAGTGTTGGGTATTGCATCCCATGGGGAGAGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTTCATCTTGAAGACAGTGTTGGGTATTGCATCCCATGGGGAGAGGC  400

seq1  TCAAAGCTCTTAATACTTGTGTATCCCATATCTGTGCTGTGCTCATTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGCTCTTAATACTTGTGTATCCCATATCTGTGCTGTGCTCATTTTC  450

seq1  TATGTCCCTATCATTACCTTAGCTACCATGCATCGCTTTGCAAAACATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCCCTATCATTACCTTAGCTACCATGCATCGCTTTGCAAAACATAA  500

seq1  ATCTCCATTAGCTATGATTCTGATAGCAGATGCTTTCTTGCTGGTACCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCATTAGCTATGATTCTGATAGCAGATGCTTTCTTGCTGGTACCAC  550

seq1  CTTTGATGAATCCCATTGTGTATTGTGTTAAAACTAGGCAGATAAGAGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGATGAATCCCATTGTGTATTGTGTTAAAACTAGGCAGATAAGAGTA  600

seq1  AAAGTTTTAGAAAAACTGGGTCTGCATTCTAAGTAATTGGAACAATGTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTTTAGAAAAACTGGGTCTGCATTCTAAGTAATTGGAACAATGTTA  650

seq1  TTAGAAGTTGCATTTTCTGTACAATAGGCTACTTTAGAGAGACAGCAGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAGTTGCATTTTCTGTACAATAGGCTACTTTAGAGAGACAGCAGTG  700

seq1  TTTCATCCTCAAAGGAGATTATTCCATTTACCTCATAGACCTATAGTTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATCCTCAAAGGAGATTATTCCATTTACCTCATAGACCTATAGTTTG  750

seq1  TTACAATCAATCTGTACTATTGCTTTTCTGTTTTGAAGAAGGAAGAAGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAATCAATCTGTACTATTGCTTTTCTGTTTTGAAGAAGGAAGAAGCT  800

seq1  TCATATTTTACAGAACCTCTATGAAATCGTTAATTGTTATTT-GGAT-GG  848
      |||||||||||||||||||||||||||||||||||||||||| |||| ||
seq2  TCATATTTTACAGAACCTCTATGAAATCGTTAATTGTTATTTGGGATGGG  850

seq1  TTGAAGACATCTATCCCTAGGTACAAAATTGAACAATAAGAATTTGCACA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGACATCTATCCCTAGGTACAAAATTGAACAATAAGAATTTGCACA  900

seq1  ATCTTCTAAAGAAAATCTAGGAGATGTGGTTTTCCATTGTGTCTGGGAGA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCTAAAGAAAATCTAGGAGATGTGGTTTTCCATTGTGTCTGGGAGA  950

seq1  AGCCCAAAAGACACCAGAACTGTTTAACATCTCTGTATTTGTCTCTTATT  998
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  AGCCCAAAAGACACCAGAACTGTTTAACATCTCTGTATTTGTCTC-TATT  999

seq1  TTGATATTCTATATGTTGCATTAAACCCTTTACCACATGTCT-GAGTTTG  1047
      ||||||||||||||||||||||||||||||   ||||||||| |||||||
seq2  TTGATATTCTATATGTTGCATTAAACCCTT--ACACATGTCTGGAGTTTG  1047

seq1  TCT-GAGTCTGTTCTTT-GCTGTTCACTGTTGCAATACA-GGTGT-CACC  1093
      ||| ||||||||||||| ||||||||||| ||||||||| ||||| ||||
seq2  TCTGGAGTCTGTTCTTTGGCTGTTCACTGGTGCAATACAGGGTGTCCACC  1097

seq1  CTGAGCATTGCT-GAGACCATG-ACATTG-CAGAATCAGCACTGCTGTAA  1140
      |||||||||||| |||  |||| |||||| ||||  ||||||||||||||
seq2  CTGAGCATTGCTGGAGGACATGAACATTGCCAGATCCAGCACTGCTGTAA  1147

seq1  -GCTTGT----GAGTCAGTACTCCTATTACTG  1167
       ||||||    |||||||||||||||||||||
seq2  GGCTTGTGTGGGAGTCAGTACTCCTATTACTG  1179