BAC Information

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BAC

Clone NameB6Ng01-310C02
Chromosome7 (Build37)
Map Location 34,521,275 - 34,679,287
singlet/doubletdoublet
Overlap geneAbpz, LOC100043860, LOC627079, LOC635803
Upstream geneLOC100043845, LOC100043373, LOC668410, EG624439, LOC100043376, LOC100043379, LOC100043383, EG668411, LOC100043850, LOC100043386, LOC668416, EG668526, LOC100043388, LOC270234, EG668419, EG668422, EG546954, LOC100043856, LOC100043857, EG545947, EG434676, EG668431, Abpd, EG545948, LOC435963, LOC435962, EG626970, LOC100043859, LOC627004, LOC100043398, LOC100043401, Scgb2b1, LOC668440
Downstream geneAbpg, LOC100043864, LOC100043865, Abpb, Abpa, LOC100043866, LOC100043867, LOC100043868, Wtip, Sae2, LOC100043410, Pdcd2l, Gpi1, 4931406P16Rik, EG619734, Lsm14a, LOC668460, LOC668464, Kctd15, Chst8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-310C02.bB6Ng01-310C02.g
ACCGA102194GA102195
length1,0061,168
definitionB6Ng01-310C02.b B6Ng01-310C02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(34,678,651 - 34,679,287)(34,521,275 - 34,522,451)
sequence
gaattctagcgacaaggtcagggtggtttgtggtctttttcagaattcag
tgtggggcagagtagggggatttctctgggagcttctgtcttcttatagt
tatttctctgagaacagctaatattgttttggcagcttgtaggctcagtc
attttgactgctaaaattatgtttttacatttgtttagtcagccagcttt
cttatctggctctgcacttggcctgctagtacagcttggaaattcctttt
caaagggggaaggtactgggtggtcttgaattcactttggatattatact
acttatagacattctaagcaaataaatagggtaaaaagttgaataaaatt
gataaaccctaatccaaaccaaccaattggaagttaagactcaacacaat
acaagagaaagaaaggataacatcacagataatcaggaactactctgcct
ccattttaggcttaaaagccatcttatagtaaaaaaatactaagttcatt
catgtaatgatcaaataaagctctgtttcttaaggattgggctattccct
acctgtaaccttaactacaattggttaattccatgctgcctgttctagga
ctgacaactatgtctttttttcaaaaagttgtttgtaaccatcttgcaac
cttatttttgtttcagaaagttatagggtcccttatgtctaccatttctg
actatgactaccctcttatgcacaccttgcaaccatatctttggttcaag
ggatccttatgactaatttgtttgtcctgcccctgtaaccctccctattt
tgctggccaaatcccttgtttggaaattctctaccaatgtgctgtatagt
gcttgtctttttttaggtccaatgttgacatatccaatctcaacttaggg
agaggcaggacgtatacacaaataaattagcttgatttaattaatttcat
actttttattaatgatgatttggcctgggtgtttttttctcctttccagc
atttgg
gaattcacctgtctcttcccatctcttgattggaactatagacacgtgct
agcaagtctggttttatgtgagttctggaagtcaaactcaggtccccgat
aatgcacaggagcactctacccattgaaccttcttcccaggccttcactc
ttttccctttccttgggcatccactctttccccattgaagtgctttgatt
cttaatcagctttaggattcttttaaaggttcatttgtttatttcatgaa
tgagcacgctttcgctgtcttcagacatgccagaagacatctcagttagt
tatgagccaccatgtggttgctgggaattgaactcaggacctctggaaga
acagccatctcttgattgctgagccatctctctagccccttggttttgtt
tttgatgcagggactctctttgtagacctggctgtcctggagcttgctaa
gtcaactaggttgtgacaaatggtgattctcactagcaaattcaagatgc
acacccatgggatccctgagttactcccctgttatatctggacacaagga
gtccatagtcctgtgataaagcccagagacaacacatgaggtgagtatct
ctgtacctcctttctgtcctgccagcctggtgaagcctgtgactgcttac
atgctatttgccctcagataactccagtctccacagtctcacacagctgc
agtaaactgagcatggaggctcacacataaaatcccagaactcaggagga
tctctgtgagttccaggccaacctggtctacatagcaacaaaaaaagaaa
aaaggctgcaatggctctcccaggattatctggctagtcaggggcagtca
cccagctctgagtgaccacacagtcatttctctcaccatctcccagatcc
tctgaagaccttgttcatagagacgggcaaaaatagagctgcatgcattt
tattagatcagcctaagagagtgcagatgatggcacagtgtcaagaatcc
aacttcaagagagaaaagacagatcagcaagatggtgctcagatagaaca
tgttgcaaaatatggttgcctatacccaataacttctaatgtttgtgatt
atttttttttaatgcatctaatttcgtaaaggtctcgaataggtactgca
gccattctgggttgacaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_34678651_34679287
seq2: B6Ng01-310C02.b_47_683 (reverse)

seq1  TACAAACAACTTTTTGAAAAAAAGACATAGTTGTCAGTCCTAGAACAGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAACAACTTTTTGAAAAAAAGACATAGTTGTCAGTCCTAGAACAGGC  50

seq1  AGCATGGAATTAACCAATTGTAGTTAAGGTTACAGGTAGGGAATAGCCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGGAATTAACCAATTGTAGTTAAGGTTACAGGTAGGGAATAGCCCA  100

seq1  ATCCTTAAGAAACAGAGCTTTATTTGATCATTACATGAATGAACTTAGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTAAGAAACAGAGCTTTATTTGATCATTACATGAATGAACTTAGTA  150

seq1  TTTTTTTACTATAAGATGGCTTTTAAGCCTAAAATGGAGGCAGAGTAGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTACTATAAGATGGCTTTTAAGCCTAAAATGGAGGCAGAGTAGTT  200

seq1  CCTGATTATCTGTGATGTTATCCTTTCTTTCTCTTGTATTGTGTTGAGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATTATCTGTGATGTTATCCTTTCTTTCTCTTGTATTGTGTTGAGTC  250

seq1  TTAACTTCCAATTGGTTGGTTTGGATTAGGGTTTATCAATTTTATTCAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTTCCAATTGGTTGGTTTGGATTAGGGTTTATCAATTTTATTCAAC  300

seq1  TTTTTACCCTATTTATTTGCTTAGAATGTCTATAAGTAGTATAATATCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTACCCTATTTATTTGCTTAGAATGTCTATAAGTAGTATAATATCCA  350

seq1  AAGTGAATTCAAGACCACCCAGTACCTTCCCCCTTTGAAAAGGAATTTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGAATTCAAGACCACCCAGTACCTTCCCCCTTTGAAAAGGAATTTCC  400

seq1  AAGCTGTACTAGCAGGCCAAGTGCAGAGCCAGATAAGAAAGCTGGCTGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGTACTAGCAGGCCAAGTGCAGAGCCAGATAAGAAAGCTGGCTGAC  450

seq1  TAAACAAATGTAAAAACATAATTTTAGCAGTCAAAATGACTGAGCCTACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACAAATGTAAAAACATAATTTTAGCAGTCAAAATGACTGAGCCTACA  500

seq1  AGCTGCCAAAACAATATTAGCTGTTCTCAGAGAAATAACTATAAGAAGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCCAAAACAATATTAGCTGTTCTCAGAGAAATAACTATAAGAAGAC  550

seq1  AGAAGCTCCCAGAGAAATCCCCCTACTCTGCCCCACACTGAATTCTGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCTCCCAGAGAAATCCCCCTACTCTGCCCCACACTGAATTCTGAAA  600

seq1  AAGACCACAAACCACCCTGACCTTGTCGCTAGAATTC  637
      |||||||||||||||||||||||||||||||||||||
seq2  AAGACCACAAACCACCCTGACCTTGTCGCTAGAATTC  637

seq1: chr7_34521275_34522451
seq2: B6Ng01-310C02.g_70_1237

seq1  GAATTCACCTGTCTCTTCCCATCTCTTGATTGGAACTATAGACACGTGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCTGTCTCTTCCCATCTCTTGATTGGAACTATAGACACGTGCT  50

seq1  AGCAAGTCTGGTTTTATGTGAGTTCTGGAAGTCAAACTCAGGTCCCCGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGTCTGGTTTTATGTGAGTTCTGGAAGTCAAACTCAGGTCCCCGAT  100

seq1  AATGCACAGGAGCACTCTACCCATTGAACCTTCTTCCCAGGCCTTCACTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCACAGGAGCACTCTACCCATTGAACCTTCTTCCCAGGCCTTCACTC  150

seq1  TTTTCCCTTTCCTTGGGCATCCACTCTTTCCCCATTGAAGTGCTTTGATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCCTTTCCTTGGGCATCCACTCTTTCCCCATTGAAGTGCTTTGATT  200

seq1  CTTAATCAGCTTTAGGATTCTTTTAAAGGTTCATTTGTTTATTTCATGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATCAGCTTTAGGATTCTTTTAAAGGTTCATTTGTTTATTTCATGAA  250

seq1  TGAGCACGCTTTCGCTGTCTTCAGACATGCCAGAAGACATCTCAGTTAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCACGCTTTCGCTGTCTTCAGACATGCCAGAAGACATCTCAGTTAGT  300

seq1  TATGAGCCACCATGTGGTTGCTGGGAATTGAACTCAGGACCTCTGGAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGCCACCATGTGGTTGCTGGGAATTGAACTCAGGACCTCTGGAAGA  350

seq1  ACAGCCATCTCTTGATTGCTGAGCCATCTCTCTAGCCCCTTGGTTTTGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCCATCTCTTGATTGCTGAGCCATCTCTCTAGCCCCTTGGTTTTGTT  400

seq1  TTTGATGCAGGGACTCTCTTTGTAGACCTGGCTGTCCTGGAGCTTGCTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATGCAGGGACTCTCTTTGTAGACCTGGCTGTCCTGGAGCTTGCTAA  450

seq1  GTCAACTAGGTTGTGACAAATGGTGATTCTCACTAGCAAATTCAAGATGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAACTAGGTTGTGACAAATGGTGATTCTCACTAGCAAATTCAAGATGC  500

seq1  ACACCCATGGGATCCCTGAGTTACTCCCCTGTTATATCTGGACACAAGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCCATGGGATCCCTGAGTTACTCCCCTGTTATATCTGGACACAAGGA  550

seq1  GTCCATAGTCCTGTGATAAAGCCCAGAGACAACACATGAGGTGAGTATCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCATAGTCCTGTGATAAAGCCCAGAGACAACACATGAGGTGAGTATCT  600

seq1  CTGTACCTCCTTTCTGTCCTGCCAGCCTGGTGAAGCCTGTGACTGCTTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTACCTCCTTTCTGTCCTGCCAGCCTGGTGAAGCCTGTGACTGCTTAC  650

seq1  ATGCTATTTGCCCTCAGATAACTCCAGTCTCCACAGTCTCACACAGCTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTATTTGCCCTCAGATAACTCCAGTCTCCACAGTCTCACACAGCTGC  700

seq1  AGTAAACTGAGCATGGAGGCTCACACATAAAATCCCAGAACTCAGGAGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAACTGAGCATGGAGGCTCACACATAAAATCCCAGAACTCAGGAGGA  750

seq1  TCTCTGTGAGTTCCAGGCCAACCTGGTCTACATAGCAACAAAAAAAGAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTGAGTTCCAGGCCAACCTGGTCTACATAGCAACAAAAAAAGAAA  800

seq1  AAAGGCTGCAATGGCTCTCCCAGGATTATCTGGCTAGTCAGGGGCAGTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCTGCAATGGCTCTCCCAGGATTATCTGGCTAGTCAGGGGCAGTCA  850

seq1  CCCAGCTCTGAGTGACCACACAGTCATTTCTCTCACCATCTCCCAGATCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCTCTGAGTGACCACACAGTCATTTCTCTCACCATCTCCCAGATCC  900

seq1  TCTGAAGACCTTGTTCATAGAGACGGGGCAAAAATAGAGCTGCATGCA-T  949
      |||||||||||||||||||||||| ||||||||||||||||||||||| |
seq2  TCTGAAGACCTTGTTCATAGAGAC-GGGCAAAAATAGAGCTGCATGCATT  949

seq1  TTATTAGAATCAGCCTAAGAGAGTGCAGGATGATGGCACAGGTGTCAGGA  999
      ||||||| ||||||||||||||||||| |||||||||||| |||||| ||
seq2  TTATTAG-ATCAGCCTAAGAGAGTGCA-GATGATGGCACA-GTGTCAAGA  996

seq1  ATCCAACTTCAGGAGAGAAAAAGGACAGATCAGCAAGATGGTGCTCAGAT  1049
      ||||||||||| |||||||||  |||||||||||||||||||||||||||
seq2  ATCCAACTTCAAGAGAGAAAA--GACAGATCAGCAAGATGGTGCTCAGAT  1044

seq1  TAGACATGTTGC-AAATATGGGTTGCCTATAACCCATTAACTTCTAATG-  1097
         ||||||||| |||||| |||||||||| ||||| |||||||||||| 
seq2  AGAACATGTTGCAAAATAT-GGTTGCCTAT-ACCCAATAACTTCTAATGT  1092

seq1  TTGTGAT--ATTTTTTTTAATGCATCCTTAATTTTCGTAAAGGTTTCTTC  1145
      |||||||   ||||||||||||||||  ||| |||||||||||| ||   
seq2  TTGTGATTATTTTTTTTTAATGCATC--TAA-TTTCGTAAAGGTCTC---  1136

seq1  GGAATA-GTACTGCAGGCATTCTGGGGTGACAA  1177
       ||||| ||||||||| ||||||||| ||||||
seq2  -GAATAGGTACTGCAGCCATTCTGGGTTGACAA  1168