BAC Information

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BAC

Clone NameB6Ng01-310F07
Chromosome7 (Build37)
Map Location 9,259,700 - 9,260,819
singlet/doubletsinglet
Overlap geneLOC100042781
Upstream geneLOC100042688, LOC100042695, LOC100041956, LOC100041961, LOC100042703, LOC100041967, LOC100042724, LOC100041977, LOC100041983, LOC100041989, LOC100041998, LOC100042009, LOC100042754, V2r14, EG628128, EG434109, LOC434110, EG628145, EG545909, LOC100042039
Downstream geneLOC665539, LOC100042795, LOC100042060, EG665552, LOC100042790, LOC100042803, LOC665598, LOC100042810, LOC665593, EG665582, EG434113, EG665577, LOC665571, LOC100042083, Gm1961, V2r4, LOC100042848, LOC100042096, LOC100042870, LOC100042105, LOC100042859, LOC100042113, LOC100042120, LOC100042126
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-310F07.bB6Ng01-310F07.g
ACCGA102335GA102336
length1,117524
definitionB6Ng01-310F07.b B6Ng01-310F07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccttttacagtttgacattaatagtttataggtgcttcttcttat
gtttgttcacatgcaaatgtggaataaataatttgtatcagtacttccag
atattctgattatcgaattgacagtttgaattatattttcaaaaataaag
tattctttttactaaacttggaaaaactgtcactcaattgtctatcacta
actcatgcttcattcactactattcaaatgaggtatgaagtaggatttcg
tggtcttttctcctagctcaatttcatatgtctagttaccataatgtgtt
atgaaaattttgttctattttgatggcttagatttgtttaaacttgttgt
attttattattctcccatagaatcctgtcatcttctaatgagtgacataa
agtggatctgatgaaaaaggaaggaaataggcatattaactataatatat
ttgccagtagaacagacaattgttcacatcccaatagaaggaatggaaac
tctaattaggatatattgtgtgagaataacaagttattttcaataaataa
aacaatcaaaatttaaaaaaaactccctgttctcagagaatgatctttcc
tttgtgtgttgtattcttttggtaggtgtttttgtcaagaattattccac
acatatccatcaaatgtattgtttttgaatgacctttttccctcttatta
aacattatgctgtttttatccattttttaataaagaaattttctcctctt
gtatatgaatgtgttttcatttccttgcctgcctctgcaggcaacttagg
aatgtcttaaaaaataaaccagttttttttttttttttgtctttgatttc
atttagagaatgtgaacacaaaagttcaattataactgaaaattacttgt
tgcttttgtctggttgctgtattgctgtacttgagtgtgtcaatagcctt
tatttttctgttgtctagtgctgtctataggtccttgaccttcttgtcat
cttatgtaaaagagtgaggtgattcttcaattaactaaaaagtgatggtt
tctatgatattaattttctgtattgtgttcattagggaatgggttggaac
tgtccgttattatacgg
tctgctaccacatccagcatcaacaggccagcagacagggatgtccagag
gggcacatgaataggggcgtttgtacccaaggcttagaccagttatattg
tggtggtgcagactttagtcctgtatcagctccaggggaaatccttttct
ccttctccctctccctctccctctccccctccccctccccctccctctaa
ctctgactctctatgtatatgtggctgcggcggccctgtctctctccatc
ttatcttcaaactcaaacagatccatatatctctaactcaaacttgacaa
gaaaaagaacccgcaccaattgttatactttatttttatttttttaattt
tggtcttgactgagtgtgaacgtcacaataaccacaaactcagagagaat
acattcttgtgcttgagggtcagggtcggatatggatagtggattccaac
tgagttctgggaggtgaaggtgaacatgtcggagtcagagtctctcacta
taacaatgaaatgtaaaacacagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_9259700_9260819
seq2: B6Ng01-310F07.b_46_1162 (reverse)

seq1  CCGTATAATAAAAGGACA--TTCAACACATTCACTAATGAACACAATTAC  48
      ||||||||| || |||||  | |||| ||||| ||||||||||||| |||
seq2  CCGTATAAT-AACGGACAGTTCCAACCCATTCCCTAATGAACACAA-TAC  48

seq1  AGAAAA-TAATATTCATAGAAA-CATCACTTTTTAGTAAATTTGAAGAAT  96
      |||||| ||||| ||||||||| |||||||||||||| || |||||||||
seq2  AGAAAATTAATA-TCATAGAAACCATCACTTTTTAGTTAA-TTGAAGAAT  96

seq1  CCACTCACTCTTTTACATAAGATGACAAGAAGGTCAAAGGAACCTATAGA  146
      |  ||||||||||||||||||||||||||||||||||  | |||||||||
seq2  CACCTCACTCTTTTACATAAGATGACAAGAAGGTCAA--GGACCTATAGA  144

seq1  CAGCACTAGAACAACAGAAAAATAAAGGCTATTGACACACCTCAAGTACA  196
      ||||||||| ||||||||||||||||||||||||||||| ||||||||||
seq2  CAGCACTAG-ACAACAGAAAAATAAAGGCTATTGACACA-CTCAAGTACA  192

seq1  GCAATAACAGCAACCAGACAAAAGCAACAAGTAATTTTCAGTTATAATTG  246
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAT-ACAGCAACCAGACAAAAGCAACAAGTAATTTTCAGTTATAATTG  241

seq1  AACTTTTGTGTTCACATTCTCTAAATGAAATCAAAGAC--AAAAAAAAAA  294
      ||||||||||||||||||||||||||||||||||||||  ||||||||||
seq2  AACTTTTGTGTTCACATTCTCTAAATGAAATCAAAGACAAAAAAAAAAAA  291

seq1  AAAACTGGTTTATTTTTTAAGACATTCCTAAGTTGCCTGCAGAGGCAGGC  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTGGTTTATTTTTTAAGACATTCCTAAGTTGCCTGCAGAGGCAGGC  341

seq1  AAGGAAATGAAAACACATTCATATACAAGAGGAGAAAATTTCTTTATTAA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAATGAAAACACATTCATATACAAGAGGAGAAAATTTCTTTATTAA  391

seq1  AAAATGGATAAAAACAGCATAATGTTTAATAAGAGGGAAAAAGGTCATTC  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGGATAAAAACAGCATAATGTTTAATAAGAGGGAAAAAGGTCATTC  441

seq1  AAAAACAATACATTTGATGGATATGTGTGGAATAATTCTTGACAAAAACA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAATACATTTGATGGATATGTGTGGAATAATTCTTGACAAAAACA  491

seq1  CCTACCAAAAGAATACAACACACAAAGGAAAGATCATTCTCTGAGAACAG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACCAAAAGAATACAACACACAAAGGAAAGATCATTCTCTGAGAACAG  541

seq1  GGAGTTTTTTTTAAATTTTGATTGTTTTATTTATTGAAAATAACTTGTTA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTTTTTTTAAATTTTGATTGTTTTATTTATTGAAAATAACTTGTTA  591

seq1  TTCTCACACAATATATCCTAATTAGAGTTTCCATTCCTTCTATTGGGATG  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCACACAATATATCCTAATTAGAGTTTCCATTCCTTCTATTGGGATG  641

seq1  TGAACAATTGTCTGTTCTACTGGCAAATATATTATAGTTAATATGCCTAT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACAATTGTCTGTTCTACTGGCAAATATATTATAGTTAATATGCCTAT  691

seq1  TTCCTTCCTTTTTCATCAGATCCACTTTATGTCACTCATTAGAAGATGAC  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTCCTTTTTCATCAGATCCACTTTATGTCACTCATTAGAAGATGAC  741

seq1  AGGATTCTATGGGAGAATAATAAAATACAACAAGTTTAAACAAATCTAAG  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTCTATGGGAGAATAATAAAATACAACAAGTTTAAACAAATCTAAG  791

seq1  CCATCAAAATAGAACAAAATTTTCATAACACATTATGGTAACTAGACATA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCAAAATAGAACAAAATTTTCATAACACATTATGGTAACTAGACATA  841

seq1  TGAAATTGAGCTAGGAGAAAAGACCACGAAATCCTACTTCATACCTCATT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATTGAGCTAGGAGAAAAGACCACGAAATCCTACTTCATACCTCATT  891

seq1  TGAATAGTAGTGAATGAAGCATGAGTTAGTGATAGACAATTGAGTGACAG  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATAGTAGTGAATGAAGCATGAGTTAGTGATAGACAATTGAGTGACAG  941

seq1  TTTTTCCAAGTTTAGTAAAAAGAATACTTTATTTTTGAAAATATAATTCA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCCAAGTTTAGTAAAAAGAATACTTTATTTTTGAAAATATAATTCA  991

seq1  AACTGTCAATTCGATAATCAGAATATCTGGAAGTACTGATACAAATTATT  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTCAATTCGATAATCAGAATATCTGGAAGTACTGATACAAATTATT  1041

seq1  TATTCCACATTTGCATGTGAACAAACATAAGAAGAAGCACCTATAAACTA  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCCACATTTGCATGTGAACAAACATAAGAAGAAGCACCTATAAACTA  1091

seq1  TTAATGTCAAACTGTAAAAGGAATTC  1120
      ||||||||||||||||||||||||||
seq2  TTAATGTCAAACTGTAAAAGGAATTC  1117