BAC Information

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BAC

Clone NameB6Ng01-310P18
Chromosome7 (Build37)
Map Location 102,563,820 - 102,564,977
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666816, LOC100040132
Downstream geneLOC666823, Frda-ps, EG666836, Odz4, LOC670727
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-310P18.bB6Ng01-310P18.g
ACCGA102815GA102816
length1,2361,143
definitionB6Ng01-310P18.b B6Ng01-310P18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatgaggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattattccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
tttcgtcttactgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattgtcgatcttacagtacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatccatttgc
attcttctacatgataacaaccagttgtgccagcaccaatcattgaaaat
gctgtctttcttccactggatggttttatgggatgcagggatggtttaat
atacgaaaatccatcaatgtaatccattatataaacaaactcaaagacaa
aaaccacatgatcatctcattagatgcagaaaaaaacatttcacaagatc
caacacccattcatgataaacgttttggaaagatcaggaattcaaggccc
atacctaaacatgataaaagcaatctacagcaaaccagtagccaacatca
aagtaaatggagagaagctggaagcaatcccactaaagtcagggactaga
caaggctgccccctttctccctaccttttcaacatagtacttgaagtatt
agccagagcaattcgacaacaaacggagatcaaggggatgcaaattggaa
aagaggaagtcaaaatatcactttttgcagatgatatgataggatatgta
agtgaccctaaaaattccaccagagaactcctaaacctgaaaaacagctt
cggtgaagttgctgggatataaaattaacctcaaacaagtcaatggccct
tttcttctattacaaagaaataaacaggctgaagaaaagaaatttaggta
aacaacaccctttctcaataagtcacaaaattaattatataaactatctt
ggcgtgaactctaactaaggaagtcaaagaatcctgtatgaataaaacct
tcaatctcctggagaggaattcaaggaggaatctcagaaagaattggaag
aaatctctcccacgtgctctccatagtgtagatctg

gaattctaaacgtaactagttagtgacagctaactaattagtgattggtg
agtcagaagccttctaaggtaaaaggaccacaccagaagctggagcaagg
cagtcctaaatagtaaagagggaggaagaggcaaatagcaataaaactgg
acaggaacttgatcctgccatcagacaagaagataagaaataatgttttt
tatcctaagtacaaacaagtgttgtcttcatagtgtgcaactgagaagat
taatttggttaacatggtcaaatactaatttattataaaggacttagagc
tacagcatggacaatggatcaaagaagagcaacagtaagtagaagaataa
atcaggagataatatactggcccataaattaatgaatgtgttgataacat
gataatggaattggccaagaagcagccactacaaaaagtccttacccctg
ttcccacctgactctttggtcctgggccgttaaaataggccaaggaaagt
cattcagacacaagagcaacagttgagcttgaactaattcgggttatgaa
agtttttacccaggaaaaagattaagatagtaccaattttatttggtgcc
atgatgtagagttagtgcaaaggcaagggctaaggcagtatgatagttaa
taataatgaatcaagatggaaaggaaaaatcatcttctggggcagaaaat
gtcaaatttaaattcaaaagcaaatgtttggagctgccacaatattctcc
cttagcggttttatttactttactatgaaacattatgtatagacacagcc
tctttataaaaaaaaaaaatgcacctctttttttcctactcaaagagcac
tttcttttcagcatttaaaagaaaggtgcagatgaaagactaagaaaaaa
ttatttgccaacccaaagaaactcagagcctaaggatgcaggagcacatg
ctgtatcttttattttgcagcatagcccaagggttttatctctgcagagc
ctgctcagaaatcctctgatcttctattgaaagcaattcaactctgaact
tgctatcagaggaaaggctgcagagtaaactgcaccttctgggacacgag
atgaaatccaatttccgatgctcaccttccttagaagaaggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_102563820_102564977
seq2: B6Ng01-310P18.g_66_1208

seq1  GAATTCTAAACGTAACTAGTTAGTGACAGCTAACTAATTAGTGATTGGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAACGTAACTAGTTAGTGACAGCTAACTAATTAGTGATTGGTG  50

seq1  AGTCAGAAGCCTTCTAAGGTAAAAGGACCACACCAGAAGCTGGAGCAAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGAAGCCTTCTAAGGTAAAAGGACCACACCAGAAGCTGGAGCAAGG  100

seq1  CAGTCCTAAATAGTAAAGAGGGAGGAAGAGGCAAATAGCAATAAAACTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCCTAAATAGTAAAGAGGGAGGAAGAGGCAAATAGCAATAAAACTGG  150

seq1  ACAGGAACTTGATCCTGCCATCAGACAAGAAGATAAGAAATAATGTTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAACTTGATCCTGCCATCAGACAAGAAGATAAGAAATAATGTTTTT  200

seq1  TATCCTAAGTACAAACAAGTGTTGTCTTCATAGTGTGCAACTGAGAAGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTAAGTACAAACAAGTGTTGTCTTCATAGTGTGCAACTGAGAAGAT  250

seq1  TAATTTGGTTAACATGGTCAAATACTAATTTATTATAAAGGACTTAGAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTGGTTAACATGGTCAAATACTAATTTATTATAAAGGACTTAGAGC  300

seq1  TACAGCATGGACAATGGATCAAAGAAGAGCAACAGTAAGTAGAAGAATAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGCATGGACAATGGATCAAAGAAGAGCAACAGTAAGTAGAAGAATAA  350

seq1  ATCAGGAGATAATATACTGGCCCATAAATTAATGAATGTGTTGATAACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGGAGATAATATACTGGCCCATAAATTAATGAATGTGTTGATAACAT  400

seq1  GATAATGGAATTGGCCAAGAAGCAGCCACTACAAAAAGTCCTTACCCCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAATGGAATTGGCCAAGAAGCAGCCACTACAAAAAGTCCTTACCCCTG  450

seq1  TTCCCACCTGACTCTTTGGTCCTGGGCCGTTAAAATAGGCCAAGGAAAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCACCTGACTCTTTGGTCCTGGGCCGTTAAAATAGGCCAAGGAAAGT  500

seq1  CATTCAGACACAAGAGCAACAGTTGAGCTTGAACTAATTCGGGTTATGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCAGACACAAGAGCAACAGTTGAGCTTGAACTAATTCGGGTTATGAA  550

seq1  AGTTTTTACCCAGGAAAAAGATTAAGATAGTACCAATTTTATTTGGTGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTTACCCAGGAAAAAGATTAAGATAGTACCAATTTTATTTGGTGCC  600

seq1  ATGATGTAGAGTTAGTGCAAAGGCAAGGGCTAAGGCAGTATGATAGTTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGTAGAGTTAGTGCAAAGGCAAGGGCTAAGGCAGTATGATAGTTAA  650

seq1  TAATAATGAATCAAGATGGAAAGGAAAAATCATCTTCTGGGGCAGAAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAATGAATCAAGATGGAAAGGAAAAATCATCTTCTGGGGCAGAAAAT  700

seq1  GTCAAATTTAAATTCAAAAGCAAATGTTTGGAGCTGCCACAATATTCTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAATTTAAATTCAAAAGCAAATGTTTGGAGCTGCCACAATATTCTCC  750

seq1  CTTAGCGGTTTTATTTACTTTACTATGAAACATTATGTATAGACACAGCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGCGGTTTTATTTACTTTACTATGAAACATTATGTATAGACACAGCC  800

seq1  TCTTTATAAAAAAAAAAAATGCACCTCTTTTTTTCCTACTCAAAGAGCAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTATAAAAAAAAAAAATGCACCTCTTTTTTTCCTACTCAAAGAGCAC  850

seq1  TTTCTTTTCAGCATTTAAAAGAAAGGTGCAGATGAAAGACTAAGAAAAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTCAGCATTTAAAAGAAAGGTGCAGATGAAAGACTAAGAAAAAA  900

seq1  TTATTTGCCAACCCAAAGAAAACTCAGGAGCCTAAGGATGCAGGAGCACA  950
      |||||||||||||||||| ||||||| |||||||||||||||||||||||
seq2  TTATTTGCCAACCCAAAG-AAACTCA-GAGCCTAAGGATGCAGGAGCACA  948

seq1  TGCTGTATCTTTTATTTTGCAGCAATAG-CCAAGGGTTTTATCTCTGCAG  999
      ||||||||||||||||||||||| |||| |||||||||||||||||||| 
seq2  TGCTGTATCTTTTATTTTGCAGC-ATAGCCCAAGGGTTTTATCTCTGCA-  996

seq1  GAGCCTGCTCAGAAAATCCTCTGATC-TCTATTGAAAGCCATTCCACTCC  1048
      |||||||||||| ||||||||||||| |||||||||||| |||| ||| |
seq2  GAGCCTGCTCAG-AAATCCTCTGATCTTCTATTGAAAGCAATTCAACT-C  1044

seq1  TGAACTTGCTATCAGAGGAAAGCTGGCAAGAGTAAAACTGCAACCTCTGG  1098
      ||||||||||||||||||||||   || ||||| |||||||| | |||||
seq2  TGAACTTGCTATCAGAGGAAAGGCTGC-AGAGT-AAACTGCACCTTCTGG  1092

seq1  GGACCACGAGATGAAAATCCCAAATTCCCCCAAATGCTCACCTTTCTTTA  1148
      |   ||||||||||||   |||| ||||     ||||||||| ||| |||
seq2  G--ACACGAGATGAAA--TCCAATTTCC----GATGCTCACC-TTCCTTA  1133

seq1  GAAGAAGGTG  1158
      ||||||||||
seq2  GAAGAAGGTG  1143


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