MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-311E04
Chromosome	7 (Build37)
Map Location	78,934,181 - 79,067,561
singlet/doublet	doublet
Overlap gene	none
Upstream gene	LOC665535
Downstream gene	Mctp2, LOC100042873, LOC100042880, LOC233391, LOC665570, LOC100042029
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC665535 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665535
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Mctp2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:244049 MGI:2685335
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042873 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042873
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs

name	LOC100042880 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042880
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 874 ESTs, 9 Proteins

name	LOC233391 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:233391
definition	note : 2310037I24Rik pseudogene pseudo : _no_value

name	LOC665570 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665570
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 14 Proteins pseudo : _no_value

name	LOC100042029 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042029
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Mctp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85701535 GeneID:244049 MGI:2685335
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : multiple C2 domains, transmembrane 2 transcript_id : NM_001024703.1

name	LOC100042873 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149257510 GeneID:100042873
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs product : hypothetical protein LOC100042873 transcript_id : XM_001478905.1

name	LOC100042880 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149257512 GeneID:100042880
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 874 ESTs, 9 Proteins product : similar to Rpl17 protein transcript_id : XM_001478911.1

name	Mctp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701536 CCDS:CCDS21361.1 GeneID:244049 MGI:2685335
definition	GO_component : GO:0016021 - integral to membrane [Evidence ISS]; GO:0005624 - membrane fraction [Evidence ISS] GO_function : GO:0005509 - calcium ion binding [Evidence ISS]; GO:0005544 - calcium-dependent phospholipid binding [Evidence ISS] GO_process : GO:0019722 - calcium-mediated signaling [Evidence ISS] codon_start : 1 product : multiple C2 domains, transmembrane 2 protein_id : NP_001019874.1

name	LOC100042873 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149257511 GeneID:100042873
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478955.1

name	LOC100042880 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149257513 GeneID:100042880
definition	codon_start : 1 product : similar to Rpl17 protein protein_id : XP_001478961.1

name	LOC665535 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665535
definition	number : 1 pseudo : _no_value

name	LOC665535 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665535
definition	number : 2 pseudo : _no_value

name	LOC100042029 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042029
definition	number : 1 pseudo : _no_value

name	LOC100042029 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042029
definition	number : 2 pseudo : _no_value

name	LOC665570 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149257514 GeneID:665570
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 14 Proteins product : similar to LOC654472 protein pseudo : _no_value transcript_id : XR_033989.1

clone name	MSMg01-408O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447J13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-146C07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-156E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-469G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-183I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132O12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-170K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-531J09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-477M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-144I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-068I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-051L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-144K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-105D14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063K07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-352M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-159A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-093B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-269P24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335I05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416J15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486D08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063M16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-317A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-300J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-523P13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-269H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-477C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516K21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064A05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-302G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-121O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-129L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-214H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-234A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-161K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-174G09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-540K02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-369F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-475B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-263J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-446N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-436P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-182L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427C23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-470B23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-319G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-330F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-215E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-196G24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499C21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-464H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-125A03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-459G09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-104N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072C18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-195F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-524D11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-160C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331J15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-513F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-192K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-065H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-349G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-065L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337H06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240P03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-273I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045K07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346H08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-250B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-217F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-311E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125B14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318O07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-265K15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206H18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253O21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192F15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-255C03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214B07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-311H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043P18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-250I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015G24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258N19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201M24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036L11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295N16
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-311E04.b	B6Ng01-311E04.g
ACC	GA103023	GA103024
length	940	448
definition	B6Ng01-311E04.b	B6Ng01-311E04.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(78,934,181 - 78,935,176)	(79,067,108 - 79,067,561)
sequence	gaattcctaaatgcatcaaaagtatggaaaagcattctaagtatagtgaa gtccctcaatgcatgcagacagagcaccaagtagaggattgggctgaaat acagatcgttggagctggagagatggctccattggtaaaactttcctcac ggcatggacccacattttaaatctccaatacccatatagaaatctggggt ggatggcatgcatctataatcctagcattgcaggggcagaggcagaggca gaggcagaggcagaggcagaggcagaggcagaggcagaggcagaggcaga ggcagaggcagaggcagaggcagaggcagaggcagaggcagaggcagagg cagaggcagaggcagaggcagaggcagaggcagaggcagaggcagaggca ggtgttcatggaaatcattaaccagtgaacttggtaagcttcaaattcag tgagagaccctgtcagtcaaaacgactaaatggacagcaatataggaaat atccaagttgaccttttgactatatatacatgtacacacacacacagtca catcacttattcacatcagcatctgtgtcttctactccaggttgaactct gagtcagcatgtactatgttacattattcattcattctccaagatgtatg ctatctgtgacctgtctattcttggatcagtgatggcatgacagcagtgc tcataacatacctctacccacaagcctcaatccaaccagagatgaatggt actctatacacagcatgccactattacaactatatgcaccagtgttggca agttactgcattacatctggcttgtggcaccaagcgagtgtgcttacggc tagtctagctctacagcgtactcatatgatgcatacacatctgcatatga ttgcgatgtgctagtgagatacatgcatagatagtacatc	aggaagtctaaccaggggcggtgacattgacagtgaggttgaagccttga aggaactgtagaattttgatacacagcatagctgggattgatatgctaat tttctagtgtgatcccagggtaaaagtgttcctttgagtgttctgtcttt tgttagacaaatttgcactagtgggaatgatatctctgggtatccaagaa ccttatcacatggtatatctattttctatgcagcccatctcagacttaat gtgaactattctggcaatgacaaggatcactctctctggttgtttgtaga gatgtggatggagggtagaagttaggtttgattcttcctcccaaccccgt gctcccagaaataagactcagactcaaaatacattggacacatagttaag ctcttcactgactagtttattactggaataaccataataatgaaacga
quality values	Open. Hide. 62 41 31 24 62 62 62 62 62 62 59 59 59 62 59 59 59 51 62 62 62 62 62 51 59 62 62 59 62 62 62 49 34 30 28 28 38 36 34 28 28 28 43 56 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 59 62 56 48 38 54 59 50 62 62 54 32 26 54 62 62 62 62 62 62 54 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 59 59 59 59 59 59 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 62 62 62 35 43 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 54 62 62 62 62 62 62 54 62 58 58 54 54 49 43 58 54 52 43 33 43 58 58 54 54 49 43 49 58 58 58 33 58 58 58 54 44 49 45 58 58 58 58 58 58 58 54 54 43 49 45 58 58 58 54 58 43 58 58 51 54 49 45 58 58 48 43 49 49 58 58 49 49 58 54 58 58 54 58 49 51 58 51 49 48 58 44 58 58 58 58 58 58 58 49 49 43 49 44 58 58 43 38 58 49 58 58 54 58 58 58 58 58 54 54 58 54 54 54 54 54 49 35 49 54 49 54 54 54 49 42 54 54 49 54 54 54 54 54 54 49 49 49 46 46 54 51 54 49 44 42 26 31 54 31 26 19 23 24 44 42 39 42 42 40 32 32 32 32 32 32 32 32 32 32 40 40 40 32 40 36 41 46 32 40 40 40 32 40 31 30 31 23 31 36 41 33 33 30 14 27 40 36 40 40 33 33 33 38 33 46 38 41 27 21 16 28 25 22 36 40 29 31 38 43 36 28 33 41 36 46 46 40 29 22 29 40 25 32 25 38 36 31 32 31 38 36 44 37 38 26 17 25 23 31 19 32 25 31 29 10 11 17 20 28 30 46 24 27 17 10 5 7 15 18 24 44 35 36 36 41 36 36 41 44 38 30 41 32 28 29 28 41 36 44 41 41 38 43 44 48 36 30 36 43 31 43 34 34 31 32 13 9 9 7 8 14 29 31 34 31 31 13 8 4 9 34 24 32 26 31 31 34 31 37 25 24 31 25 34 25 31 14 11 21 8 9 4 3 18 15 13 15 27 30 28 23 21 13 27 30 24 18 17 16 30 30 26 30 31 28 30 28 25 22 16 11 30 27 20 13 12 4 13 21 22 15 14 18 9 8 13 20 25 18 9 4 6 11 3 6 30 21 27 10 8 3 11 20 25 32 28 30 24 27 19 22 18 18 22 18 20 23 22 13 4 15 8 14 13 4 10 8 19 16 20 3 9 15 12 17 13 6 20 20 24 20 21 21 19 21 18 16 15 22 22 13 22 19 22 17 14 22 17 26 19 18 4 3 21 22 9 7 13 3 2 18 6 16 21 18 15 20 18 7 6 3 5 10 7 8 6 9 12 22 25 15 14 11 20 17 17 21 18 4 8 16 21 24 17 20 14 17 23 18 13 19 12 20 6 13 15 16 16 17 22 22 21 18 15 12 9 16 12 3 9 15 18 20 15 16 24 21 21 13 13 11 18 9 14 4 9 11 3 6 10 10 16 14 16 8 19 22 24 18 16 19 18 10 18 8 16 14 9 14 3 3 3 3 5 2 4 3 3 3 8 2 2 3 9 3 2 3 3 3 19 12 7 9 6 9 2 1 3 3 1 3 4 6 19 18 6 5 5 3 4 24 9 14 15 10 9 23 11 4 5 9 8 11 15 12 16 12 25 9 9 14 18 14 16 12 18 8 13 9 15 21 14 24 9 28 11 8 12 13 11 3 3 1 2 2 2 4 5 2 2 2 5 6 7 5 5 3 3 3 18 9 17 24 10 24 18 14 14 19 12 23 9 13 10 5 9 14 14 18 24	Open. Hide. 39 56 62 54 62 31 42 50 35 27 27 32 31 44 50 56 43 62 62 62 62 62 59 59 43 59 59 62 62 46 62 59 62 62 43 46 59 62 62 62 62 59 62 62 62 62 62 62 59 59 62 59 62 54 62 59 62 62 59 62 51 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 54 62 62 62 62 62 54 54 54 54 54 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 59 59 62 42 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 54 62 62 62 62 62 54 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 59 59 62 62 56 34 49 56 62 62 62 62 62 62 62 62 62 62 62 56 59 56 50 46 23 49 50 25 34 49 59 39 49 43 30 24 14 22 29 14 22 30 29 46 13 11 11 12 17 14 14 33 17 23 23 37 37 18 50 27 34 40 24 13 33 18 13 23 11 9 10 13 16 18 10 13 23 24 30 23 7 17 36 13 23 33 16 10 21 34 13 34 12 34 34 27 29 28 18 13 16 17 21 12 8 13 18 10 10 18 15 13 13 16 5 12 23 13 12 11 18 30 18 17 28 8 12 18 23 12 8 8 13 18 10 10 13 10 18 10 13

Alignment Information

BAC End 1

BAC End 2

seq1: chr7_78934181_78935176
seq2: B6Ng01-311E04.b_44_983

seq1  GAATTCCTAAATGCATCAAAAGTATGGAAAAGCATTCTAAGTATAGTGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAAATGCATCAAAAGTATGGAAAAGCATTCTAAGTATAGTGAA  50

seq1  GTCCCTCAATGCATGCAGACAGAGCACCAAGTAGAGGATTGGGCTGAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCTCAATGCATGCAGACAGAGCACCAAGTAGAGGATTGGGCTGAAAT  100

seq1  ACAGATCGTTGGAGCTGGAGAGATGGCTCCATTGGTAAAACTTTCCTCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATCGTTGGAGCTGGAGAGATGGCTCCATTGGTAAAACTTTCCTCAC  150

seq1  GGCATGGACCCACATTTTAAATCTCCAATACCCATATAGAAATCTGGGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGGACCCACATTTTAAATCTCCAATACCCATATAGAAATCTGGGGT  200

seq1  GGATGGCATGCATCTATAATCCTAGCATTGCAGGGGCAGAGGCAGAGGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGCATGCATCTATAATCCTAGCATTGCAGGGGCAGAGGCAGAGGCA  250

seq1  GAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGA  300

seq1  GGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGG  350

seq1  CAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCA  400

seq1  GGTGTTCATGGAAATCATTAACCAGTGAACTTGGTAAGCTTCAAATTCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTTCATGGAAATCATTAACCAGTGAACTTGGTAAGCTTCAAATTCAG  450

seq1  TGAGAGACCCTGTCAGTCAAAACGACTAAATGGACAGCAATATAGGAAAA  500
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TGAGAGACCCTGTCAGTCAAAACGACTAAATGGACAGCAATATAGG-AAA  499

seq1  TATCCAAAGTTGACCTTTTGACTATATATACATGTACACACACACACAGT  550
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCC-AAGTTGACCTTTTGACTATATATACATGTACACACACACACAGT  548

seq1  CACATCACTTTATTCACATCAAGCATCTGTGTCTTCTACTCCAGGGTTGA  600
      |||||||| ||||||||||| |||||||||||||||||||||| ||||||
seq2  CACATCAC-TTATTCACATC-AGCATCTGTGTCTTCTACTCCA-GGTTGA  595

seq1  ACTCTGAGTCAGCATGTACTATGTTTACATTATTCATTCATTCTCCAAGG  650
      ||||||||||||||||||||||| |||||||||||||||||||||||| |
seq2  ACTCTGAGTCAGCATGTACTATG-TTACATTATTCATTCATTCTCCAA-G  643

seq1  ATGTAATGGCTATCTGTGACCTGTCTATTCTTGGATCAGGTGATGGCATG  700
      |||||   |||||||||||||||||||||||||||||| |||||||||||
seq2  ATGTA--TGCTATCTGTGACCTGTCTATTCTTGGATCA-GTGATGGCATG  690

seq1  ACAGCAGTGCTCATAACATACCCTCTACCCCCCACAAGCCTCAAATCCAA  750
      |||||||||||||||||||| ||||||   |||||||||||| |||||||
seq2  ACAGCAGTGCTCATAACATA-CCTCTA---CCCACAAGCCTC-AATCCAA  735

seq1  CCAGAGATGAATGGTTACTCTTATAACAACAGGCATGCCACTATTACAAC  800
      |||||||||||||| ||||| ||||   ||| ||||||||||||||||||
seq2  CCAGAGATGAATGG-TACTC-TATA--CACA-GCATGCCACTATTACAAC  780

seq1  TATATGCACCAGTGTTTGGCAAGTTACTGCATTACCATCTGGCCTTTGTG  850
      |||||||||||||| ||||||||||||||||||| ||||||||  |||||
seq2  TATATGCACCAGTG-TTGGCAAGTTACTGCATTA-CATCTGGC--TTGTG  826

seq1  GGCAACCCAAAGCAAAGGTGTGCCTTAGGGGTTAGTTCCTAGGGCCTCCT  900
      |    | | |||| |  ||||| ||||  || ||||  ||||   || ||
seq2  G----CACCAAGCGA--GTGTG-CTTA-CGGCTAGT--CTAG---CT-CT  862

seq1  ACAGCGTTATCTCATATGGATGCATACCACATCTGGCAATATGATTTTCA  950
      |||||||   ||||||| |||||||| ||||||||   ||||||||    
seq2  ACAGCGT--ACTCATAT-GATGCATA-CACATCTG--CATATGATT----  902

seq1  CCTATGTATTCTAGGTGAAGGATTACCAATGCATAGATAGTACATC  996
       | |||  | ||| ||||  || |||  ||||||||||||||||||
seq2  GCGATG--TGCTA-GTGA--GA-TAC--ATGCATAGATAGTACATC  940

seq1: chr7_79067108_79067561
seq2: B6Ng01-311E04.g_65_518 (reverse)

seq1  TAGTTTTATTATTATTGTTATTTTAGTAATGAGCTAGTCAGAGAAGAGCT  50
      | |||| |||||||| ||||||  |||||| | |||||||| ||||||||
seq2  TCGTTTCATTATTATGGTTATTCCAGTAATAAACTAGTCAGTGAAGAGCT  50

seq1  TAACTATGTGGCCAATGTATTTTGAGTCTGAGTCTTATTTCTGGGAGCAC  100
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TAACTATGTGTCCAATGTATTTTGAGTCTGAGTCTTATTTCTGGGAGCAC  100

seq1  GGGGTTGGGAGGAAGAATCAAACCTAACTTCTACCCTCCATCCACATCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTTGGGAGGAAGAATCAAACCTAACTTCTACCCTCCATCCACATCTC  150

seq1  TACAAACAACCAGAGAGAGTGATCCTTGTCATTGCCAGAATAGTTCACAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAACAACCAGAGAGAGTGATCCTTGTCATTGCCAGAATAGTTCACAT  200

seq1  TAAGTCTGAGATGGGCTGCATAGAAAATAGATATACCATGTGATAAGGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTCTGAGATGGGCTGCATAGAAAATAGATATACCATGTGATAAGGTT  250

seq1  CTTGGATACCCAGAGATATCATTCCCACTAGTGCAAATTTGTCTAACAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGATACCCAGAGATATCATTCCCACTAGTGCAAATTTGTCTAACAAA  300

seq1  AGACAGAACACTCAAAGGAACACTTTTACCCTGGGATCACACTAGAAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGAACACTCAAAGGAACACTTTTACCCTGGGATCACACTAGAAAAT  350

seq1  TAGCATATCAATCCCAGCTATGCTGTGTATCAAAATTCTACAGTTCCTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATATCAATCCCAGCTATGCTGTGTATCAAAATTCTACAGTTCCTTC  400

seq1  AAGGCTTCAACCTCACTGTCAATGTCACCGCCCCTGGTTAGACTTCCTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTTCAACCTCACTGTCAATGTCACCGCCCCTGGTTAGACTTCCTGA  450

seq1  ATTC  454
      ||||
seq2  ATTC  454

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information