BAC Information

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BAC

Clone NameB6Ng01-311E08
Chromosome7 (Build37)
Map Location 134,380,568 - 134,506,101
singlet/doubletdoublet
Overlap geneZfp553, Zfp771, 2410015N17Rik, Sephs2, Itgal, Zfp768, LOC100043097
Upstream geneSbk1, LOC100043495, Lat, 2210013K02Rik, Nfatc2ip, Cd19, Rabep2, Atp2a1, Sh2b1, Tufm, Atxn2l, Eif3s8, Cln3, Apob48r, Il27, Nupr1, Ccdc101, Sult1a1, LOC629029, Giyd2, Bola2, Coro1a, Snrp1c-ps1, LOC100043044, Mapk3, Gdpd3, Ypel3, Tbx6, Ppp4c, Aldoa, 1500016O10Rik, 4930451I11Rik, Doc2a, Ccdc95, Hirip3, 1110032O16Rik, Kctd13, A830007L07Rik, Sez6l2, D830044I16Rik, Cdipt, Mvp, 2900092E17Rik, Maz, Kif22, 1810010M01Rik, AI467606, Qprt, Spn, Cd2bp2, Tbc1d10b, Mylpf, Sept1, LOC100043580
Downstream geneLOC100043589, 6430604K15Rik, 9130019O22Rik, E430018J23Rik, LOC100043590, Zfp764, Zfp688, Zfp689, Prr14, Fbs1, 1700008J07Rik, LOC100043597, D030022P06Rik, Phkg2, Gm166, Rnf40, 1700120K04Rik, Zfp629, Bcl7c, Ctf1, Ctf2, Fbxl19, Tmem142c, Setd1a, Hsd3b7, Stx1b2, Stx4a, Zfp668, Zfp646, BC039632, Vkorc1, Bckdk, Myst1, Prss8, Prss36, Fus, Pycard, Trim72, LOC436010, EG668675, Itgam, Itgax, Itgad, Cox6a2, LOC100043133, Armc5, Tgfb1i1, Slc5a2, BC017158, EG628781
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-311E08.bB6Ng01-311E08.g
ACCGA103031GA103032
length1,0731,034
definitionB6Ng01-311E08.b B6Ng01-311E08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(134,505,036 - 134,506,101)(134,380,568 - 134,381,590)
sequence
gaattcagtctaaggcttacagcgccaccctgtgataatatcgcagaata
gcagtctatcgacatgctatgtaaagaggcccgacctaatcagactagat
attgtaataatatcgtcaaggatcaattactaaatgaaggtctatatgct
gagctaaaattaaagattctgtttgtgaatcatacaataaattatatgtt
tcattttgtagagttcagagacttaagatataaacatacgtaaatacatc
atacaattgatacttactcaagatttcaatgtgcttctgccttgggctct
gaagaggctgatgatgagattgcacatttagatagcaatattggaaatgc
cttacagattgaagttgatgatgcttcaacctatgtcgaattataatgtc
cgttatgttagacattgtggcctgaaacatgatattaacataccttacaa
tcctacaggacaagcaattgtagagagatctaacattatctcagtatctc
cccttttagtccaataaaaggctctttctctaacaccaataaactatata
cagtaagcatctatgaaaaaaatcaggtaagaattacattcataatatct
gcggcagaaagcatggcttttctcttcagttccatggccctggtctgtct
agcggctgagctcatgttagtggggtatggggaagtggccaaacatcctg
atgatcttgggaagagtaaacctgactccttccagctcaggggtcagcac
aactggcagccaagtccagttctcctggagcggtggaacctgtccaacat
gtcgtcctccctctcctcacgaggaggcaggagctccagggtgggcctca
ttcacatacatacacacggcaggaggagcatgccagagatgctttcacgg
gcatcccagggccatcccgtggtgctgggccaggtatagaacattgtcct
ggactctgcccctcaccctggggacaaaacagagtgcaggtgctgagcca
gaggcccagcctgaaggccgcgtgacaggcgtggcacggcggggcactca
tcaagtccggggccagcttcaag
gaattctagggagggtagaagcccagggtaccggagggagggtgtctgca
ggtgaaggcagagaagagcctgggaaacggtgggagggaagaggaggatg
agaatagctagaaacagattagagactacataaccttcatgctcaggaaa
ctgtcttggttaggcgctgggaccttgccagtgtgagctgtatcgcagct
tctagaacactgcctagcacagattaggcccccaatagttgtaaaagctg
gacccagttttaaaatcctactgcctcctgttaacacgcccctcaactgg
acacagctgtgtccagcctttagttcctgcactcaggaggcaaaggcagg
cagatctcttgaattcatagccagactgatctacagagagttctaggtaa
gccagaactctttggtgaaacaaaaaaacaaataaaaacccttgatcctt
tcagccttagtctgggagagcagattgttggaattttaggtgtccagaca
aggcgggggcatcttggccaccctgggggtgaagtattgctgtggagaag
gcagttctcacctcagcctgtggggcactgggcgtggttttatccaagaa
gggcactttgggaaagagcttctctctgtatgatttgagggtccttccca
ctcagacactgggacctggtaaaatagaagagccacgggaggcagaggca
ggcggatttctgagttcgaggccagcctggtctacagagtgagttctagg
acagccagggctatacagagaaaccctgtctcgaaaaaacgaaaacaaac
aaacaaacaaacaaaaaaatagaagagccagcaagaacccctcagagcct
ccagcctagttcatcgtgtgtacattctgcaaagggccagcctgcccgag
caaaggtcggagccagtgcaggccagaagaagcttccaagtctccacagc
taagtgtctgtctttctccttattaataattgttccttgtctgaggtttg
gtgtggtggttatgtgtaatgctgtgtgccatgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_134505036_134506101
seq2: B6Ng01-311E08.b_49_1121 (reverse)

seq1  CTTGGAGCT-GCCCCGGACTTG-TGAGTG-CCCGCCGTGCCACGCCCTGT  47
      |||| |||| |||||||||||| |||||| |||||||||||||| |||||
seq2  CTTGAAGCTGGCCCCGGACTTGATGAGTGCCCCGCCGTGCCACG-CCTGT  49

seq1  CACGCGGCC-TCAGGCT-GGCCTCTGGCTCAGCACCTGCACTCTG-TTTG  94
      ||||||||| ||||||| ||||||||||||||||||||||||||| ||||
seq2  CACGCGGCCTTCAGGCTGGGCCTCTGGCTCAGCACCTGCACTCTGTTTTG  99

seq1  TCCCCAGGGTGAGGGGCAGAGTCCAGGACAATGTTCTATACCTGGCCCAG  144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCAGGGTGAGGGGCAGAGTCCAGGACAATGTTCTATACCTGGCCCAG  149

seq1  CACCACGGGATGGCCCTGGGATGCCCGTG-AAGCATCTCTGGCATGCTCC  193
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CACCACGGGATGGCCCTGGGATGCCCGTGAAAGCATCTCTGGCATGCTCC  199

seq1  TCCTGCCGTGTGTATGTATGTGAATGAGGCCCA-CCTGGAGCTCCTGCCT  242
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TCCTGCCGTGTGTATGTATGTGAATGAGGCCCACCCTGGAGCTCCTGCCT  249

seq1  CCTCGTGAGGAGAGGGAGGACGACATGTTGGACAGGTTCCACCGCTCCAG  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCGTGAGGAGAGGGAGGACGACATGTTGGACAGGTTCCACCGCTCCAG  299

seq1  GAGAACTGGACTTGGCTGCCAGTTGTGCTGACCCCTGAGCTGGAAGGAGT  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACTGGACTTGGCTGCCAGTTGTGCTGACCCCTGAGCTGGAAGGAGT  349

seq1  CAGGTTTACTCTTCCCAAGATCATCAGGATGTTTGGCCACTTCCCCATAC  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTTACTCTTCCCAAGATCATCAGGATGTTTGGCCACTTCCCCATAC  399

seq1  CCCACTAACATGAGCTCAGCCGCTAGACAGACCAGGGCCATGGAACTGAA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTAACATGAGCTCAGCCGCTAGACAGACCAGGGCCATGGAACTGAA  449

seq1  GAGAAAAGCCATGCTTTCTGCCGCAGATATTATGAATGTAATTCTTACCT  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAAGCCATGCTTTCTGCCGCAGATATTATGAATGTAATTCTTACCT  499

seq1  GATTTTTTTCATAGATGCTTACTGTATATAGTTTATTGGTGTTAGAGAAA  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTTTTCATAGATGCTTACTGTATATAGTTTATTGGTGTTAGAGAAA  549

seq1  GAGCCTTTTATTGGACTAAAAGGGGAGATACTGAGATAATGTTAGATCTC  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCTTTTATTGGACTAAAAGGGGAGATACTGAGATAATGTTAGATCTC  599

seq1  TCTACAATTGCTTGTCCTGTAGGATTGTAAGGTATGTTAATATCATGTTT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACAATTGCTTGTCCTGTAGGATTGTAAGGTATGTTAATATCATGTTT  649

seq1  CAGGCCACAATGTCTAACATAACGGACATTATAATTCGACATAGGTTGAA  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCCACAATGTCTAACATAACGGACATTATAATTCGACATAGGTTGAA  699

seq1  GCATCATCAACTTCAATCTGTAAGGCATTTCCAATATTGCTATCTAAATG  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCATCAACTTCAATCTGTAAGGCATTTCCAATATTGCTATCTAAATG  749

seq1  TGCAATCTCATCATCAGCCTCTTCAGAGCCCAAGGCAGAAGCACATTGAA  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATCTCATCATCAGCCTCTTCAGAGCCCAAGGCAGAAGCACATTGAA  799

seq1  ATCTTGAGTAAGTATCAATTGTATGATGTATTTACGTATGTTTATATCTT  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGAGTAAGTATCAATTGTATGATGTATTTACGTATGTTTATATCTT  849

seq1  AAGTCTCTGAACTCTACAAAATGAAACATATAATTTATTGTATGATTCAC  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTCTGAACTCTACAAAATGAAACATATAATTTATTGTATGATTCAC  899

seq1  AAACAGAATCTTTAATTTTAGCTCAGCATATAGACCTTCATTTAGTAATT  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGAATCTTTAATTTTAGCTCAGCATATAGACCTTCATTTAGTAATT  949

seq1  GATCCTTGACGATATTATTACAATATCTAGTCTGATTAGGTCGGGCCTCT  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCTTGACGATATTATTACAATATCTAGTCTGATTAGGTCGGGCCTCT  999

seq1  TTACATAGCATGTCGATAGACTGCTATTCTGCGATATTATCACAGGGTGG  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATAGCATGTCGATAGACTGCTATTCTGCGATATTATCACAGGGTGG  1049

seq1  CGCTGTAAGCCTTAGACTGAATTC  1066
      ||||||||||||||||||||||||
seq2  CGCTGTAAGCCTTAGACTGAATTC  1073

seq1: chr7_134380568_134381590
seq2: B6Ng01-311E08.g_68_1101

seq1  GAATTCTAGGGAGGGTAGAAGCCCAGGGTACCGGAGGGAGGGTGTCTGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGGGAGGGTAGAAGCCCAGGGTACCGGAGGGAGGGTGTCTGCA  50

seq1  GGTGAAGGCAGAGAAGAGCCTGGGAAACGGTGGGAGGGAAGAGGAGGATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAAGGCAGAGAAGAGCCTGGGAAACGGTGGGAGGGAAGAGGAGGATG  100

seq1  AGAATAGCTAGAAACAGATTAGAGACTACATAACCTTCATGCTCAGGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAGCTAGAAACAGATTAGAGACTACATAACCTTCATGCTCAGGAAA  150

seq1  CTGTCTTGGTTAGGCGCTGGGACCTTGCCAGTGTGAGCTGTATCGCAGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTTGGTTAGGCGCTGGGACCTTGCCAGTGTGAGCTGTATCGCAGCT  200

seq1  TCTAGAACACTGCCTAGCACAGATTAGGCCCCCAATAGTTGTAAAAGCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGAACACTGCCTAGCACAGATTAGGCCCCCAATAGTTGTAAAAGCTG  250

seq1  GACCCAGTTTTAAAATCCTACTGCCTCCTGTTAACACGCCCCTCAACTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCAGTTTTAAAATCCTACTGCCTCCTGTTAACACGCCCCTCAACTGG  300

seq1  ACACAGCTGTGTCCAGCCTTTAGTTCCTGCACTCAGGAGGCAAAGGCAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGCTGTGTCCAGCCTTTAGTTCCTGCACTCAGGAGGCAAAGGCAGG  350

seq1  CAGATCTCTTGAATTCATAGCCAGACTGATCTACAGAGAGTTCTAGGTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATCTCTTGAATTCATAGCCAGACTGATCTACAGAGAGTTCTAGGTAA  400

seq1  GCCAGAACTCTTTGGTGAAACAAAAAAACAAATAAAAACCCTTGATCCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGAACTCTTTGGTGAAACAAAAAAACAAATAAAAACCCTTGATCCTT  450

seq1  TCAGCCTTAGTCTGGGAGAGCAGATTGTTGGAATTTTAGGTGTCCAGACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCCTTAGTCTGGGAGAGCAGATTGTTGGAATTTTAGGTGTCCAGACA  500

seq1  AGGCGGGGGCATCTTGGCCACCCTGGGGGTGAAGTATTGCTGTGGAGAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCGGGGGCATCTTGGCCACCCTGGGGGTGAAGTATTGCTGTGGAGAAG  550

seq1  GCAGTTCTCACCTCAGCCTGTGGGGCACTGGGCGTGGTTTTATCCAAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTCTCACCTCAGCCTGTGGGGCACTGGGCGTGGTTTTATCCAAGAA  600

seq1  GGGCACTTTGGGAAAGAGCTTATGTCTGTATGATTTGAGGGTCCTTCCCA  650
      ||||||||||||||||||||| | ||||||||||||||||||||||||||
seq2  GGGCACTTTGGGAAAGAGCTTCTCTCTGTATGATTTGAGGGTCCTTCCCA  650

seq1  CTCAGACACTGGGACCTGGTAAAATAGAAGAGCCACGGGAGGCAGAGGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGACACTGGGACCTGGTAAAATAGAAGAGCCACGGGAGGCAGAGGCA  700

seq1  GGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGAGTTCTAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGAGTTCTAGG  750

seq1  ACAGCCAGGGCTATACAGAGAAACCCTGTCTCGAAAAAAACGAAAACAAA  800
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  ACAGCCAGGGCTATACAGAGAAACCCTGTCTCG-AAAAAACGAAAACAAA  799

seq1  CAAACAAACAAAC-AAAAAATAGAAGAGCCAGCAGGAA-CCCTCAGAGCC  848
      ||||||||||||| |||||||||||||||||||| ||| |||||||||||
seq2  CAAACAAACAAACAAAAAAATAGAAGAGCCAGCAAGAACCCCTCAGAGCC  849

seq1  TCCAGCCTAGGTCATCGTGTGGACA-TCTGCAAA-GGCCAGCCTG-CCGA  895
      |||||||||| |||||||||| ||| |||||||| |||||||||| ||||
seq2  TCCAGCCTAGTTCATCGTGTGTACATTCTGCAAAGGGCCAGCCTGCCCGA  899

seq1  GC-AAGGGCGGAGCCAGTGCAGGCCAG-AGGAGCTT-CAAGTCTCCACAG  942
      || |||| ||||||||||||||||||| || ||||| |||||||||||||
seq2  GCAAAGGTCGGAGCCAGTGCAGGCCAGAAGAAGCTTCCAAGTCTCCACAG  949

seq1  CTAAGTGTCTGTCTGTCTCCTTATTAATAAATTGTCCCTTGTCTGAGGTT  992
      |||||||||||||| ||||||||||||| |||||| ||||||||||||||
seq2  CTAAGTGTCTGTCTTTCTCCTTATTAAT-AATTGTTCCTTGTCTGAGGTT  998

seq1  T-GTGT-GTGGTTATGTGT-ATG-TGTGTG-CATGG  1023
      | |||| |||||||||||| ||| |||||| |||||
seq2  TGGTGTGGTGGTTATGTGTAATGCTGTGTGCCATGG  1034