BAC Information

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BAC

Clone NameB6Ng01-311H07
Chromosome7 (Build37)
Map Location 11,068,869 - 11,069,457
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042859, LOC100042113, LOC100042120, LOC100042126, LOC100042139, LOC100042894, Vmn2r47, 2810047C21Rik, LOC665625, LOC545911, EG625580, LOC100042163, LOC625605, EG434117, EG628152, LOC100042921, Vmn2r52, LOC665663, V1re11, LOC628521, LOC628525, LOC100042206, Nlrp4d, LOC100042214, V1re10
Downstream geneZik1, EG628580, V1re9, V1rl1, EG628596, Nlrp4b, LOC333184, V1re13, BQ559217, LOC637237, LOC236479, EG665879, Zscan4b, LOC665793, EG665798, Gm397, Zscan4-ps1, LOC635187, LOC100042997, LOC100042293, Zscan4d, LOC628737, LOC676750, LOC672893, LOC546931, LOC675762, Zscan4e, LOC665857, LOC665861, Zscan4f, LOC673742, LOC665887, LOC637541, LOC100042361, Zscan4-ps2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-311H07.bB6Ng01-311H07.g
ACCGA103168GA103169
length756589
definitionB6Ng01-311H07.b B6Ng01-311H07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccagtactatattgaataggtagggtgaaagtgggcagtctcttc
tagcccctcattttagtggaattgcttccagctactctccatttagtttg
atgttggctactggtttgctgtttattgcttttattacgtttttatatgg
gacttgaattcctaatctttccaagacttttatcataaatatgtgttgga
ttttgtgaattttttgtcaatgctttttcaccatctaataaaatgatcat
gtggtttttgtctttgagtttgtttatgtagtggattatgttgatggatt
tttgtataataaaccacccctgcattcctggaatgaagcctacttgatca
tgagggatgatcattttgatgtggtcttggattccgttagcgagaatttt
gagtactttggcatagatattgataacaaacgtttggctgaagttctcat
tctttgttgggtctttatatggtttgggtattagagtaattgtggcttca
tagaatgaatttagtacagtaccttttgtttctattttgtgaaattgttt
gaggagaattggaattagttcttctttgaaggtcttatagaattctacac
taaacacatctgatccttggcttttttggttgggagactattaatgactg
tttctatttctttaggggatataggactgtttagaatcttttaatctgat
cccggatttaactttgatacctgtatctgtctattaatatcgtccatttt
catcca
gaattcagtaaatgcagtagattctttagataaaagtcccacttcaatag
actctgaagtgatcacataggtgcaaaatcatacaagtgagtgcacacaa
tctccatgagaaaaaaattgtcctcactcaatacaaaagtacagactgga
gaaaggacttactagtttttaaaatcttattatgttttatttctttactt
taaaatattagccgggcgtggtggcacacgcctttaatcccagcactcgg
gaggcagaggcaggcggatttctgagttcgaggccagcctggtctacagc
gtgagttccaggacagccagagctacacagagaaaccctgtctcaaaaaa
accaaaaaaaattaataaatgaatgaaacaataacaaaatgaataaatta
ataaaaacctagccactagggtaactgaacggtcacttaaacccgctaga
agagagaaactcaattttctccaatatagtgacattggttatatcaacca
ctccaggacaggtctcatgttcaggagtagtatcccacatataatggatt
ccacgggcatgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_11068869_11069457
seq2: B6Ng01-311H07.g_63_651 (reverse)

seq1  CACACACACACACACACACACACACACACATGCCCGTGGAATCCATTATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACATGCCCGTGGAATCCATTATA  50

seq1  TGTGGGATACTACTCCTGAACATGAGACCTGTCCTGGAGTGGTTGATATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGATACTACTCCTGAACATGAGACCTGTCCTGGAGTGGTTGATATA  100

seq1  ACCAATGTCACTATATTGGAGAAAATTGAGTTTCTCTCTTCTAGCGGGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATGTCACTATATTGGAGAAAATTGAGTTTCTCTCTTCTAGCGGGTT  150

seq1  TAAGTGACCGTTCAGTTACCCTAGTGGCTAGGTTTTTATTAATTTATTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGACCGTTCAGTTACCCTAGTGGCTAGGTTTTTATTAATTTATTCA  200

seq1  TTTTGTTATTGTTTCATTCATTTATTAATTTTTTTTGGTTTTTTTGAGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTATTGTTTCATTCATTTATTAATTTTTTTTGGTTTTTTTGAGAC  250

seq1  AGGGTTTCTCTGTGTAGCTCTGGCTGTCCTGGAACTCACGCTGTAGACCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTTCTCTGTGTAGCTCTGGCTGTCCTGGAACTCACGCTGTAGACCA  300

seq1  GGCTGGCCTCGAACTCAGAAATCCGCCTGCCTCTGCCTCCCGAGTGCTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGCCTCGAACTCAGAAATCCGCCTGCCTCTGCCTCCCGAGTGCTGG  350

seq1  GATTAAAGGCGTGTGCCACCACGCCCGGCTAATATTTTAAAGTAAAGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAAAGGCGTGTGCCACCACGCCCGGCTAATATTTTAAAGTAAAGAAA  400

seq1  TAAAACATAATAAGATTTTAAAAACTAGTAAGTCCTTTCTCCAGTCTGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACATAATAAGATTTTAAAAACTAGTAAGTCCTTTCTCCAGTCTGTA  450

seq1  CTTTTGTATTGAGTGAGGACAATTTTTTTCTCATGGAGATTGTGTGCACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGTATTGAGTGAGGACAATTTTTTTCTCATGGAGATTGTGTGCACT  500

seq1  CACTTGTATGATTTTGCACCTATGTGATCACTTCAGAGTCTATTGAAGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGTATGATTTTGCACCTATGTGATCACTTCAGAGTCTATTGAAGTG  550

seq1  GGACTTTTATCTAAAGAATCTACTGCATTTACTGAATTC  589
      |||||||||||||||||||||||||||||||||||||||
seq2  GGACTTTTATCTAAAGAATCTACTGCATTTACTGAATTC  589