BAC Information

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BAC

Clone NameB6Ng01-311H24
Chromosome7 (Build37)
Map Location 101,758,053 - 101,883,844
singlet/doubletdoublet
Overlap geneEG666816
Upstream geneEG638305, EG545982
Downstream geneLOC100040132, LOC666823
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-311H24.bB6Ng01-311H24.g
ACCGA103202GA103203
length948489
definitionB6Ng01-311H24.b B6Ng01-311H24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(101,882,905 - 101,883,844)(101,758,053 - 101,758,543)
sequence
gaattcacgtgctgctctcctggacattaagacaagcttttattctctgc
tggtattttgaatatctgggaagaacaaaacaaaccatagaattataagg
aagtatcagtcacacacagccatacagatatttgcatatgatgttcagta
gattaaaatatgaaatgagatccacatgagtggaaatatgacctcccgaa
atatgtgtgttttatttaaattatggggttgtaaaatgcaaactgttggt
tgatcttgatcttctcaaacttagaactctaactacattatatgaatgag
agttgaagaaagcttccaagacaggaccataacaaaggcctgagtgacac
aatgtcggctgttgttcactatgtcagctggctgtcaagatgaagtatgg
cgtaaggggtcagatactaaaggagaggctgctagctagactttgttatt
ctgctcttgggagccagggagtaatgaagcacaaccacctctcccaactc
tgcttactgctcagtgaatgaataagtatcagacttctatcatatcagac
gaggacttaatctttacagtagtttgtgatgcactatacagattatgagt
tacggatgacatttccaaagatgcccaatatatatctacataagccaaac
tctttgccaggtgtgtgtgtgtgtgtgtttctttgttttgttttgttggt
ttttttgtttcattttgttttttgcaagacagccaaaaactattatggct
ataactgtactttgcttttagaaaataactatgagataattttggtcaaa
atagcaataaaaagaaatgtctttcttttctattggtgaatgggttggaa
cctctttttagattattacctactcaaatgtctaaatcgtttcattgaat
atatggaagaattaaaaattgctattaaatgggacaaggtatatggtc

gaattccaagactgatgttaaagacaaagacacactacacacacttattt
ctgttccttataactcttcattaagaaacttctcattagaggtgtttatc
actcactctctctctctctctctctctctctctctctctctctctctctc
tcccgtgcgagcgcgcgcgagcgggtctatctatcacaattattattttt
tatattataaaaataattattaccttctctctctagatcccgatctctgc
cgctgctcaatcattttttatctatctctctacatatctatgtgtgtctt
accgggagagagagaaaaaaaaaaaaacacatcaatctctataaaaacat
tagtgcttgtgataggagaagagacagataatagtctctgactaggtgag
cagagagacagacagcgcgacggagagagagtggcggtggcgcgtgcggg
atccatatgaagagtatgctgtgctatctatatatgagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_101882905_101883844
seq2: B6Ng01-311H24.b_47_994 (reverse)

seq1  GACCATATACCTTTAGCCCTTTAA-AGCAATTTGTAATTCTTCC-TATTT  48
      |||||||||||||   || ||||| |||||||| |||||||||| ||| |
seq2  GACCATATACCTTGTCCCATTTAATAGCAATTTTTAATTCTTCCATATAT  50

seq1  TC-ATGAAA-GGTTTAGACATTTG-GTTGGTAATTATCTGAAAAAGAGGT  95
      || |||||| | |||||||||||| || |||||| |||| ||||||||||
seq2  TCAATGAAACGATTTAGACATTTGAGTAGGTAATAATCT-AAAAAGAGGT  99

seq1  --CCAGCCATTCACAATTAGAAA--GAAGACA-TTCTTTTTATTTGCTCT  140
        | | |||||||| | ||||||   |||||| ||||||||| ||||| |
seq2  TCCAACCCATTCACCAATAGAAAAGAAAGACATTTCTTTTTA-TTGCTAT  148

seq1  TTTGACCAAAATTATCTCATAATTATTTTCTAAAAGCAAAGTACAGTTAT  190
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TTTGACCAAAATTATCTCATAGTTATTTTCTAAAAGCAAAGTACAGTTAT  198

seq1  AGCCATTATAGTTTTTTGCTGTCTTGCAAAAACAAAAATGAAACAAAAAA  240
      |||||| ||||||||| |||||||||||||||  ||||||||||||||||
seq2  AGCCATAATAGTTTTTGGCTGTCTTGCAAAAAACAAAATGAAACAAAAAA  248

seq1  ACCAACAAAACAAAACAAAGAAACACACACACACACACACCTGGCAAAGA  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAACAAAACAAAACAAAGAAACACACACACACACACACCTGGCAAAGA  298

seq1  GTTTGGCTTATGTAGATATATATTGGGCATCTTTGGAAATGTCATCCGTA  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGCTTATGTAGATATATATTGGGCATCTTTGGAAATGTCATCCGTA  348

seq1  ACTCATAATCTGTATAGTGCATCACAAACTACTGTAAAGATTAAGTCCTC  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATAATCTGTATAGTGCATCACAAACTACTGTAAAGATTAAGTCCTC  398

seq1  GTCTGATATGATAGAAGTCTGATACTTATTCATTCACTGAGCAGTAAGCA  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGATATGATAGAAGTCTGATACTTATTCATTCACTGAGCAGTAAGCA  448

seq1  GAGTTGGGAGAGGTGGTTGTGCTTCATTACTCCCTGGCTCCCAAGAGCAG  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTGGGAGAGGTGGTTGTGCTTCATTACTCCCTGGCTCCCAAGAGCAG  498

seq1  AATAACAAAGTCTAGCTAGCAGCCTCTCCTTTAGTATCTGACCCCTTACG  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACAAAGTCTAGCTAGCAGCCTCTCCTTTAGTATCTGACCCCTTACG  548

seq1  CCATACTTCATCTTGACAGCCAGCTGACATAGTGAACAACAGCCGACATT  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATACTTCATCTTGACAGCCAGCTGACATAGTGAACAACAGCCGACATT  598

seq1  GTGTCACTCAGGCCTTTGTTATGGTCCTGTCTTGGAAGCTTTCTTCAACT  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCACTCAGGCCTTTGTTATGGTCCTGTCTTGGAAGCTTTCTTCAACT  648

seq1  CTCATTCATATAATGTAGTTAGAGTTCTAAGTTTGAGAAGATCAAGATCA  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTCATATAATGTAGTTAGAGTTCTAAGTTTGAGAAGATCAAGATCA  698

seq1  ACCAACAGTTTGCATTTTACAACCCCATAATTTAAATAAAACACACATAT  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAACAGTTTGCATTTTACAACCCCATAATTTAAATAAAACACACATAT  748

seq1  TTCGGGAGGTCATATTTCCACTCATGTGGATCTCATTTCATATTTTAATC  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGGGAGGTCATATTTCCACTCATGTGGATCTCATTTCATATTTTAATC  798

seq1  TACTGAACATCATATGCAAATATCTGTATGGCTGTGTGTGACTGATACTT  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGAACATCATATGCAAATATCTGTATGGCTGTGTGTGACTGATACTT  848

seq1  CCTTATAATTCTATGGTTTGTTTTGTTCTTCCCAGATATTCAAAATACCA  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTATAATTCTATGGTTTGTTTTGTTCTTCCCAGATATTCAAAATACCA  898

seq1  GCAGAGAATAAAAGCTTGTCTTAATGTCCAGGAGAGCAGCACGTGAATTC  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGAATAAAAGCTTGTCTTAATGTCCAGGAGAGCAGCACGTGAATTC  948


seq1: chr7_101758053_101758543
seq2: B6Ng01-311H24.g_66_554

seq1  GAATTCCAAGACTGATGTTAAAGACAAAGACACACTACACACACTTATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGACTGATGTTAAAGACAAAGACACACTACACACACTTATTT  50

seq1  CTGTTCCTTATAACTCTTCATTAAGAAACTTCTCATTAGAGGTGTTTATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCCTTATAACTCTTCATTAAGAAACTTCTCATTAGAGGTGTTTATC  100

seq1  ACTCACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  150

seq1  TCTCTTTCTCTCTCTCACATGCTGTTCTATTTATTATTATTATTATTATT  200
      || | | |   | | | |  || | ||||| ||| |  ||||||||| ||
seq2  TCCCGTGCGAGCGCGCGCGAGCGGGTCTATCTATCACAATTATTATTTTT  200

seq1  ATTATTATTATTATCATTATTACCTATTTACTTTATATCCTGCTCACTGC  250
        |||||| |  || ||||||||||  |  || || |||| | || ||||
seq2  TATATTATAAAAATAATTATTACCTTCTCTCTCTAGATCCCGATCTCTGC  250

seq1  CGCCTCCCAGTCACCCCTTACATAATCCTAACTCC--TCCTTTGAGTGGC  298
      |||  | || |||    |||  ||   ||  || |    || || ||| |
seq2  CGCTGCTCAATCATTTTTTATCTA--TCTCTCTACATATCTATGTGTGTC  298

seq1  TTCCCCGTTGGCTTTGCCCCCGACCCTTGCACATCAAGTCTCTGT--GAG  346
      || || |  |     |      |      |||||||| ||||| |   | 
seq2  TTACCGGGAGAGAGAGAAAAAAAAAAAAACACATCAA-TCTCTATAAAAA  347

seq1  GCTAGGTGCATCCTCTCCCACTAAGGCCAGACAAGAGAGCCTAGCTAGAT  396
        |  |||| |    |   |  |  | |||| || ||   ||  |||| |
seq2  CATTAGTGCTTGTGATAGGAGAAGAGACAGATAATAGTCTCTGACTAGGT  397

seq1  GAACATATGGACAGGCAACAGTGTTTGGGATAGACCCT-GCTCTAG-TTG  444
      || || |  |||||   |||| |    ||| |||   | ||  | |   |
seq2  GAGCAGAGAGACAG---ACAGCGCGACGGAGAGAGAGTGGCGGTGGCGCG  444

seq1  TTCGGGATCCATATGAAGAGCAAGCTGTGCATATTCTACATATGAGT  491
      | |||||||||||||||||| | ||||||| || |||| ||||||||
seq2  TGCGGGATCCATATGAAGAGTATGCTGTGC-TA-TCTATATATGAGT  489


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